Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Sult2a-ps1-201ENSMUST00000120317 341 ntBASIC3.63□□□□□ -1.83
Traf1P39428 Gm12095-201ENSMUST00000121962 816 ntBASIC3.63□□□□□ -1.83
Traf1P39428 Gm8080-201ENSMUST00000122046 1155 ntBASIC3.63□□□□□ -1.83
Traf1P39428 Gm24198-201ENSMUST00000157812 108 ntBASIC3.63□□□□□ -1.83
Traf1P39428 Gm22187-201ENSMUST00000157819 129 ntBASIC3.63□□□□□ -1.83
Traf1P39428 Gm24190-201ENSMUST00000157976 216 ntBASIC3.63□□□□□ -1.83
Traf1P39428 Gm24768-201ENSMUST00000158512 94 ntBASIC3.63□□□□□ -1.83
Traf1P39428 Gm3102-201ENSMUST00000164236 489 ntBASIC3.63□□□□□ -1.83
Traf1P39428 Defa27-201ENSMUST00000167683 282 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Traf1P39428 Vmn1r-ps10-201ENSMUST00000176165 889 ntBASIC3.63□□□□□ -1.83
Traf1P39428 Gm5709-201ENSMUST00000177879 1165 ntBASIC3.63□□□□□ -1.83
Traf1P39428 Gm17929-201ENSMUST00000186851 627 ntBASIC3.63□□□□□ -1.83
Traf1P39428 Gm37692-201ENSMUST00000192633 232 ntBASIC3.63□□□□□ -1.83
Traf1P39428 Gm43004-201ENSMUST00000201872 703 ntBASIC3.63□□□□□ -1.83
Traf1P39428 Gm7946-201ENSMUST00000203326 958 ntBASIC3.63□□□□□ -1.83
Traf1P39428 Gm19177-201ENSMUST00000204520 613 ntBASIC3.63□□□□□ -1.83
Traf1P39428 Gm17872-201ENSMUST00000222550 532 ntBASIC3.63□□□□□ -1.83
Traf1P39428 AC168880.1-201ENSMUST00000225113 707 ntBASIC3.63□□□□□ -1.83
Traf1P39428 Bcl2a1c-201ENSMUST00000066460 444 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Traf1P39428 Mir21a-201ENSMUST00000083521 92 ntBASIC3.63□□□□□ -1.83
Traf1P39428 Gm5168-201ENSMUST00000089165 824 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Traf1P39428 Olfr561-201ENSMUST00000098217 1071 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Traf1P39428 Vmn1r82-203ENSMUST00000227672 3651 ntBASIC3.63□□□□□ -1.83
Traf1P39428 Vmn2r81-201ENSMUST00000020547 3276 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Traf1P39428 Olfr1132-202ENSMUST00000216082 3260 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Traf1P39428 Gm44230-201ENSMUST00000203032 3550 ntBASIC3.63□□□□□ -1.83
Traf1P39428 Stap1-206ENSMUST00000198435 3350 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Traf1P39428 Olfr810-203ENSMUST00000214878 4709 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Traf1P39428 AC122850.1-201ENSMUST00000220380 5690 ntBASIC3.63□□□□□ -1.83
Traf1P39428 Gm7905-201ENSMUST00000119933 1386 ntBASIC3.63□□□□□ -1.83
Traf1P39428 Gm6221-201ENSMUST00000180064 1386 ntBASIC3.63□□□□□ -1.83
Traf1P39428 Olfr1258-201ENSMUST00000102609 7007 ntAPPRIS P1 TSL 3 BASIC3.62□□□□□ -1.83
Traf1P39428 Olfr1211-203ENSMUST00000213412 4173 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Traf1P39428 Olfr987-203ENSMUST00000216347 1453 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Traf1P39428 Olfr1033-205ENSMUST00000218397 3973 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Traf1P39428 Gm3940-201ENSMUST00000105087 432 ntBASIC3.62□□□□□ -1.83
Traf1P39428 Gm14932-201ENSMUST00000117112 453 ntBASIC3.62□□□□□ -1.83
Traf1P39428 Gm8260-201ENSMUST00000119230 353 ntBASIC3.62□□□□□ -1.83
Traf1P39428 Gm14128-201ENSMUST00000119514 1011 ntBASIC3.62□□□□□ -1.83
Traf1P39428 Gm22957-201ENSMUST00000122511 123 ntBASIC3.62□□□□□ -1.83
Traf1P39428 Gm23111-201ENSMUST00000122652 105 ntBASIC3.62□□□□□ -1.83
Traf1P39428 Gm14389-201ENSMUST00000140453 241 ntBASIC3.62□□□□□ -1.83
Traf1P39428 Gm24787-201ENSMUST00000157380 123 ntBASIC3.62□□□□□ -1.83
Traf1P39428 Vmn1r-ps85-201ENSMUST00000173029 890 ntBASIC3.62□□□□□ -1.83
Traf1P39428 Gm26177-201ENSMUST00000178683 107 ntBASIC3.62□□□□□ -1.83
Traf1P39428 Gm4836-201ENSMUST00000179874 907 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Traf1P39428 Gm10096-202ENSMUST00000180207 907 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Traf1P39428 Gm10487-202ENSMUST00000180344 907 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Traf1P39428 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC3.62□□□□□ -1.83
Traf1P39428 Scgb2b31-ps-201ENSMUST00000188734 328 ntBASIC3.62□□□□□ -1.83
Traf1P39428 1700066N21Rik-201ENSMUST00000190123 783 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Traf1P39428 Gm38353-201ENSMUST00000192351 617 ntTSL 3 BASIC3.62□□□□□ -1.83
Traf1P39428 Gm37987-201ENSMUST00000194999 825 ntBASIC3.62□□□□□ -1.83
Traf1P39428 Gm19649-201ENSMUST00000201126 822 ntBASIC3.62□□□□□ -1.83
Traf1P39428 Gm45105-201ENSMUST00000207824 397 ntBASIC3.62□□□□□ -1.83
Traf1P39428 Gm45588-201ENSMUST00000211213 630 ntBASIC3.62□□□□□ -1.83
Traf1P39428 Trdn-207ENSMUST00000219931 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
Traf1P39428 AC162934.3-201ENSMUST00000223015 841 ntBASIC3.62□□□□□ -1.83
Traf1P39428 AC160984.2-201ENSMUST00000224927 791 ntBASIC3.62□□□□□ -1.83
Traf1P39428 AC122418.1-201ENSMUST00000225012 511 ntBASIC3.62□□□□□ -1.83
Traf1P39428 AC147633.1-201ENSMUST00000225134 259 ntBASIC3.62□□□□□ -1.83
Traf1P39428 Gm10058-201ENSMUST00000079797 893 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Traf1P39428 Gm24707-201ENSMUST00000082812 107 ntBASIC3.62□□□□□ -1.83
Traf1P39428 Olfr1129-203ENSMUST00000214773 2403 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Traf1P39428 Gm45038-201ENSMUST00000207537 3838 ntBASIC3.62□□□□□ -1.83
Traf1P39428 Olfr901-203ENSMUST00000216644 2731 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Traf1P39428 4933413L06Rik-202ENSMUST00000111588 922 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Traf1P39428 Pbsn-202ENSMUST00000114041 697 ntTSL 2 BASIC3.61□□□□□ -1.83
Traf1P39428 Gm9440-201ENSMUST00000119667 539 ntBASIC3.61□□□□□ -1.83
Traf1P39428 Gm15177-201ENSMUST00000120491 577 ntBASIC3.61□□□□□ -1.83
Traf1P39428 Gm12914-201ENSMUST00000148635 305 ntTSL 5 BASIC3.61□□□□□ -1.83
Traf1P39428 Gm22225-201ENSMUST00000157358 278 ntBASIC3.61□□□□□ -1.83
Traf1P39428 Gm22765-201ENSMUST00000158371 128 ntBASIC3.61□□□□□ -1.83
Traf1P39428 Rpl30-ps6-201ENSMUST00000163337 348 ntBASIC3.61□□□□□ -1.83
Traf1P39428 Gm17186-201ENSMUST00000171742 456 ntBASIC3.61□□□□□ -1.83
Traf1P39428 Gm20692-201ENSMUST00000177251 681 ntTSL 3 BASIC3.61□□□□□ -1.83
Traf1P39428 Gm21842-201ENSMUST00000177552 498 ntBASIC3.61□□□□□ -1.83
Traf1P39428 Gm21626-201ENSMUST00000177791 498 ntBASIC3.61□□□□□ -1.83
Traf1P39428 Gm21562-201ENSMUST00000177888 498 ntBASIC3.61□□□□□ -1.83
Traf1P39428 Gm21539-201ENSMUST00000177925 498 ntBASIC3.61□□□□□ -1.83
Traf1P39428 Gm17469-201ENSMUST00000177942 498 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Traf1P39428 Gm17693-201ENSMUST00000178004 498 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Traf1P39428 Gm17361-201ENSMUST00000178121 498 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Traf1P39428 Gm17522-201ENSMUST00000178144 498 ntBASIC3.61□□□□□ -1.83
Traf1P39428 Gm21599-201ENSMUST00000178249 498 ntBASIC3.61□□□□□ -1.83
Traf1P39428 Gm21616-201ENSMUST00000178416 498 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Traf1P39428 Gm21914-201ENSMUST00000178452 498 ntBASIC3.61□□□□□ -1.83
Traf1P39428 Gm17584-201ENSMUST00000178471 498 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Traf1P39428 Gm21723-201ENSMUST00000178692 498 ntBASIC3.61□□□□□ -1.83
Traf1P39428 Gm21916-201ENSMUST00000178771 498 ntBASIC3.61□□□□□ -1.83
Traf1P39428 Gm21801-201ENSMUST00000178865 498 ntBASIC3.61□□□□□ -1.83
Traf1P39428 Gm21633-201ENSMUST00000178941 498 ntBASIC3.61□□□□□ -1.83
Traf1P39428 Gm17267-201ENSMUST00000178952 499 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Traf1P39428 Gm21821-201ENSMUST00000179646 498 ntBASIC3.61□□□□□ -1.83
Traf1P39428 Gm21588-201ENSMUST00000180074 498 ntBASIC3.61□□□□□ -1.83
Traf1P39428 Gm21780-201ENSMUST00000180128 498 ntBASIC3.61□□□□□ -1.83
Traf1P39428 Gm21572-201ENSMUST00000180134 498 ntBASIC3.61□□□□□ -1.83
Traf1P39428 Gm21529-201ENSMUST00000180175 498 ntBASIC3.61□□□□□ -1.83
Traf1P39428 Gm29370-202ENSMUST00000187476 499 ntBASIC3.61□□□□□ -1.83
Traf1P39428 Gm19641-201ENSMUST00000188432 417 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 109.2 ms