Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 AC160134.1-201ENSMUST00000213450 551 ntBASIC4.39□□□□□ -1.71
Usp4P35123 CT025536.1-201ENSMUST00000226744 844 ntBASIC4.39□□□□□ -1.71
Usp4P35123 AC157772.2-201ENSMUST00000228202 259 ntBASIC4.39□□□□□ -1.71
Usp4P35123 Znrd1as-201ENSMUST00000040177 976 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
Usp4P35123 Gm6361-201ENSMUST00000091031 435 ntBASIC4.39□□□□□ -1.71
Usp4P35123 Olfr133-204ENSMUST00000215549 2944 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Usp4P35123 Olfr855-202ENSMUST00000215587 1797 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Usp4P35123 Vmn1r22-202ENSMUST00000227650 3674 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Usp4P35123 Olfr1269-203ENSMUST00000216493 3827 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Usp4P35123 Nlrp4e-201ENSMUST00000076470 3382 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Usp4P35123 A230057D06Rik-202ENSMUST00000207061 3717 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Usp4P35123 Foxr2-202ENSMUST00000163801 3072 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Usp4P35123 Ccr1-201ENSMUST00000026911 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Usp4P35123 Gm44164-201ENSMUST00000203605 2561 ntBASIC4.38□□□□□ -1.71
Usp4P35123 Stk31-204ENSMUST00000172459 2922 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
Usp4P35123 Igkv1-135-201ENSMUST00000103303 394 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Usp4P35123 Gm14890-201ENSMUST00000117660 676 ntBASIC4.38□□□□□ -1.71
Usp4P35123 Gm14868-201ENSMUST00000117840 216 ntBASIC4.38□□□□□ -1.71
Usp4P35123 Gm9850-201ENSMUST00000117916 227 ntBASIC4.38□□□□□ -1.71
Usp4P35123 Gm2066-201ENSMUST00000118046 389 ntBASIC4.38□□□□□ -1.71
Usp4P35123 Gm8880-201ENSMUST00000121800 454 ntBASIC4.38□□□□□ -1.71
Usp4P35123 Gm22718-201ENSMUST00000122701 315 ntBASIC4.38□□□□□ -1.71
Usp4P35123 Gm5963-201ENSMUST00000143451 236 ntBASIC4.38□□□□□ -1.71
Usp4P35123 Gm24577-201ENSMUST00000158580 63 ntBASIC4.38□□□□□ -1.71
Usp4P35123 Gm23638-201ENSMUST00000175073 126 ntBASIC4.38□□□□□ -1.71
Usp4P35123 Gm23158-201ENSMUST00000175076 126 ntBASIC4.38□□□□□ -1.71
Usp4P35123 Gm22907-201ENSMUST00000175198 126 ntBASIC4.38□□□□□ -1.71
Usp4P35123 Gm22625-201ENSMUST00000175382 126 ntBASIC4.38□□□□□ -1.71
Usp4P35123 Gm22875-201ENSMUST00000175449 126 ntBASIC4.38□□□□□ -1.71
Usp4P35123 Gm25197-201ENSMUST00000175516 126 ntBASIC4.38□□□□□ -1.71
Usp4P35123 Gm27857-201ENSMUST00000176930 126 ntBASIC4.38□□□□□ -1.71
Usp4P35123 Gm26268-201ENSMUST00000177685 126 ntBASIC4.38□□□□□ -1.71
Usp4P35123 Gm23141-201ENSMUST00000178682 94 ntBASIC4.38□□□□□ -1.71
Usp4P35123 Gm23681-201ENSMUST00000178821 126 ntBASIC4.38□□□□□ -1.71
Usp4P35123 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Usp4P35123 Gm24520-201ENSMUST00000179510 110 ntBASIC4.38□□□□□ -1.71
Usp4P35123 Gm27883-201ENSMUST00000183941 102 ntBASIC4.38□□□□□ -1.71
Usp4P35123 Gm37568-201ENSMUST00000191755 364 ntBASIC4.38□□□□□ -1.71
Usp4P35123 Trbv11-201ENSMUST00000194354 260 ntBASIC4.38□□□□□ -1.71
Usp4P35123 Gm43405-201ENSMUST00000198642 337 ntBASIC4.38□□□□□ -1.71
Usp4P35123 Gm43001-202ENSMUST00000199076 192 ntTSL 3 BASIC4.38□□□□□ -1.71
Usp4P35123 Gm39038-201ENSMUST00000206774 355 ntTSL 3 BASIC4.38□□□□□ -1.71
Usp4P35123 AC119241.1-201ENSMUST00000223651 534 ntBASIC4.38□□□□□ -1.71
Usp4P35123 Rps24-205ENSMUST00000223999 525 ntAPPRIS ALT1 BASIC4.38□□□□□ -1.71
Usp4P35123 AC170600.1-201ENSMUST00000228763 277 ntBASIC4.38□□□□□ -1.71
Usp4P35123 Gm25793-201ENSMUST00000083287 107 ntBASIC4.38□□□□□ -1.71
Usp4P35123 Gm23099-201ENSMUST00000083454 139 ntBASIC4.38□□□□□ -1.71
Usp4P35123 Gm22577-201ENSMUST00000083731 109 ntBASIC4.38□□□□□ -1.71
Usp4P35123 Gm11284-201ENSMUST00000121910 1887 ntBASIC4.38□□□□□ -1.71
Usp4P35123 Vmn2r30-202ENSMUST00000174368 3688 ntTSL 2 BASIC4.38□□□□□ -1.71
Usp4P35123 Gm13972-201ENSMUST00000153726 3164 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Usp4P35123 Gm14429-201ENSMUST00000121881 2024 ntBASIC4.38□□□□□ -1.71
Usp4P35123 Olfr1143-202ENSMUST00000099852 2028 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Usp4P35123 Gm43327-201ENSMUST00000199285 4055 ntBASIC4.37□□□□□ -1.71
Usp4P35123 Nebl-202ENSMUST00000124270 8079 ntTSL 5 BASIC4.37□□□□□ -1.71
Usp4P35123 Gm45093-201ENSMUST00000206859 2463 ntBASIC4.37□□□□□ -1.71
Usp4P35123 BC002059-202ENSMUST00000190415 1964 ntTSL 2 BASIC4.37□□□□□ -1.71
Usp4P35123 Gm22758-201ENSMUST00000102275 96 ntBASIC4.37□□□□□ -1.71
Usp4P35123 Igkv9-129-201ENSMUST00000103308 350 ntAPPRIS ALT2 BASIC4.37□□□□□ -1.71
Usp4P35123 Gm14622-201ENSMUST00000117117 468 ntBASIC4.37□□□□□ -1.71
Usp4P35123 Gm16353-201ENSMUST00000159458 1223 ntBASIC4.37□□□□□ -1.71
Usp4P35123 Gm2389-201ENSMUST00000160487 189 ntBASIC4.37□□□□□ -1.71
Usp4P35123 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Usp4P35123 Gm7953-201ENSMUST00000168278 469 ntBASIC4.37□□□□□ -1.71
Usp4P35123 Vmn2r-ps79-201ENSMUST00000174256 377 ntBASIC4.37□□□□□ -1.71
Usp4P35123 Obox4-ps6-201ENSMUST00000176578 724 ntBASIC4.37□□□□□ -1.71
Usp4P35123 A930005H10Rik-202ENSMUST00000185424 433 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Usp4P35123 Gm28543-201ENSMUST00000188986 509 ntTSL 5 BASIC4.37□□□□□ -1.71
Usp4P35123 1700121L16Rik-201ENSMUST00000189166 561 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Usp4P35123 Rpl18a-ps2-201ENSMUST00000197158 174 ntBASIC4.37□□□□□ -1.71
Usp4P35123 Gm44336-201ENSMUST00000203696 468 ntBASIC4.37□□□□□ -1.71
Usp4P35123 Gm5876-201ENSMUST00000203735 243 ntBASIC4.37□□□□□ -1.71
Usp4P35123 Gm25937-201ENSMUST00000083912 107 ntBASIC4.37□□□□□ -1.71
Usp4P35123 Rmi1-202ENSMUST00000224479 4212 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Usp4P35123 Gm38260-201ENSMUST00000193573 3995 ntBASIC4.37□□□□□ -1.71
Usp4P35123 Gm27162-201ENSMUST00000185169 2478 ntTSL 2 BASIC4.37□□□□□ -1.71
Usp4P35123 Gm5248-201ENSMUST00000186108 4046 ntBASIC4.37□□□□□ -1.71
Usp4P35123 Gm15226-201ENSMUST00000156526 2971 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Usp4P35123 Vmn1r185-212ENSMUST00000228633 5385 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Usp4P35123 Zscan4f-202ENSMUST00000145237 1829 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Usp4P35123 Gm4788-203ENSMUST00000111989 3187 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
Usp4P35123 Zfp638-206ENSMUST00000203324 3822 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
Usp4P35123 2310003L06Rik-201ENSMUST00000007601 1603 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Usp4P35123 Vmn2r100-201ENSMUST00000166081 2553 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Usp4P35123 Mir690-201ENSMUST00000102110 109 ntBASIC4.36□□□□□ -1.71
Usp4P35123 Mir743b-201ENSMUST00000104751 77 ntBASIC4.36□□□□□ -1.71
Usp4P35123 Gm15180-201ENSMUST00000117745 492 ntBASIC4.36□□□□□ -1.71
Usp4P35123 Gm15844-201ENSMUST00000118016 576 ntBASIC4.36□□□□□ -1.71
Usp4P35123 Gm15807-201ENSMUST00000119880 1128 ntBASIC4.36□□□□□ -1.71
Usp4P35123 Gm7327-201ENSMUST00000120925 652 ntBASIC4.36□□□□□ -1.71
Usp4P35123 Scgb1b26-ps-201ENSMUST00000121845 291 ntBASIC4.36□□□□□ -1.71
Usp4P35123 Gm22613-201ENSMUST00000122679 292 ntBASIC4.36□□□□□ -1.71
Usp4P35123 Gm22059-201ENSMUST00000157544 104 ntBASIC4.36□□□□□ -1.71
Usp4P35123 Gm26701-201ENSMUST00000181571 234 ntBASIC4.36□□□□□ -1.71
Usp4P35123 Mir6938-201ENSMUST00000184173 63 ntBASIC4.36□□□□□ -1.71
Usp4P35123 Gm28500-201ENSMUST00000190286 151 ntBASIC4.36□□□□□ -1.71
Usp4P35123 Gm36891-201ENSMUST00000191995 655 ntBASIC4.36□□□□□ -1.71
Usp4P35123 Hcfc1r1-ps2-201ENSMUST00000199379 339 ntBASIC4.36□□□□□ -1.71
Usp4P35123 2500002B13Rik-202ENSMUST00000210752 298 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Usp4P35123 Gm45368-202ENSMUST00000210944 416 ntTSL 5 BASIC4.36□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 98 ms