Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm37866-201ENSMUST00000191950 696 ntBASIC2.71□□□□□ -1.97
Col2a1P28481 Gm42509-201ENSMUST00000197390 781 ntBASIC2.71□□□□□ -1.97
Col2a1P28481 Gm43804-201ENSMUST00000198280 456 ntBASIC2.71□□□□□ -1.97
Col2a1P28481 Gm42474-201ENSMUST00000201073 505 ntBASIC2.71□□□□□ -1.97
Col2a1P28481 Gm43440-201ENSMUST00000201957 729 ntBASIC2.71□□□□□ -1.97
Col2a1P28481 Gm43979-201ENSMUST00000203179 475 ntBASIC2.71□□□□□ -1.97
Col2a1P28481 4930528H21Rik-201ENSMUST00000204264 495 ntTSL 1 (best) BASIC2.71□□□□□ -1.97
Col2a1P28481 Gm17850-201ENSMUST00000210023 1154 ntBASIC2.71□□□□□ -1.97
Col2a1P28481 AC120394.1-201ENSMUST00000217153 351 ntBASIC2.71□□□□□ -1.97
Col2a1P28481 Gm30738-201ENSMUST00000221346 502 ntBASIC2.71□□□□□ -1.97
Col2a1P28481 AC129308.2-201ENSMUST00000224588 789 ntBASIC2.71□□□□□ -1.97
Col2a1P28481 Gm17916-201ENSMUST00000186137 1342 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
Col2a1P28481 Olfr509-202ENSMUST00000213756 3547 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
Col2a1P28481 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.98
Col2a1P28481 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
Col2a1P28481 Dst-201ENSMUST00000097785 23251 ntAPPRIS P4 TSL 1 (best) BASIC2.71□□□□□ -1.98
Col2a1P28481 Gm44288-201ENSMUST00000205061 2795 ntBASIC2.71□□□□□ -1.98
Col2a1P28481 Snora36b-201ENSMUST00000104383 132 ntBASIC2.71□□□□□ -1.98
Col2a1P28481 Gm15140-201ENSMUST00000112565 984 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.98
Col2a1P28481 Gm13640-201ENSMUST00000118445 264 ntBASIC2.71□□□□□ -1.98
Col2a1P28481 Gm12871-201ENSMUST00000118758 438 ntBASIC2.71□□□□□ -1.98
Col2a1P28481 Gm11998-201ENSMUST00000146304 972 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
Col2a1P28481 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC2.71□□□□□ -1.98
Col2a1P28481 Sult3a2-201ENSMUST00000165904 882 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
Col2a1P28481 Gm3173-203ENSMUST00000166848 396 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
Col2a1P28481 Gm17177-201ENSMUST00000169144 483 ntBASIC2.71□□□□□ -1.98
Col2a1P28481 Vmn2r-ps73-201ENSMUST00000173890 1194 ntBASIC2.71□□□□□ -1.98
Col2a1P28481 Olfr306-ps1-201ENSMUST00000174677 743 ntBASIC2.71□□□□□ -1.98
Col2a1P28481 Gm23152-201ENSMUST00000175322 116 ntBASIC2.71□□□□□ -1.98
Col2a1P28481 Gm27817-201ENSMUST00000184302 233 ntBASIC2.71□□□□□ -1.98
Col2a1P28481 Gm43848-201ENSMUST00000198060 1247 ntBASIC2.71□□□□□ -1.98
Col2a1P28481 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC2.71□□□□□ -1.98
Col2a1P28481 Gm45430-201ENSMUST00000211276 260 ntTSL 5 BASIC2.71□□□□□ -1.98
Col2a1P28481 AC115047.1-201ENSMUST00000213795 322 ntBASIC2.71□□□□□ -1.98
Col2a1P28481 AC159297.2-201ENSMUST00000219567 1075 ntBASIC2.71□□□□□ -1.98
Col2a1P28481 Gm9973-202ENSMUST00000220926 166 ntBASIC2.71□□□□□ -1.98
Col2a1P28481 Gm2544-201ENSMUST00000222702 756 ntBASIC2.71□□□□□ -1.98
Col2a1P28481 Sult3a2-202ENSMUST00000223295 930 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
Col2a1P28481 AC116395.1-201ENSMUST00000225480 1143 ntBASIC2.71□□□□□ -1.98
Col2a1P28481 Olfr1112-201ENSMUST00000053050 957 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
Col2a1P28481 D130040H23Rik-201ENSMUST00000078257 1218 ntTSL 2 BASIC2.71□□□□□ -1.98
Col2a1P28481 mt-Atp6-201ENSMUST00000082408 681 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
Col2a1P28481 Gm7135-202ENSMUST00000191257 1905 ntBASIC2.7□□□□□ -1.98
Col2a1P28481 AC131720.1-201ENSMUST00000218629 2132 ntBASIC2.7□□□□□ -1.98
Col2a1P28481 Olfr889-202ENSMUST00000217286 5673 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
Col2a1P28481 Gm38265-201ENSMUST00000193479 3766 ntBASIC2.7□□□□□ -1.98
Col2a1P28481 Prlr-202ENSMUST00000124470 9900 ntAPPRIS P3 TSL 1 (best) BASIC2.7□□□□□ -1.98
Col2a1P28481 Gm25094-201ENSMUST00000103992 131 ntBASIC2.7□□□□□ -1.98
Col2a1P28481 Gm14932-201ENSMUST00000117112 453 ntBASIC2.7□□□□□ -1.98
Col2a1P28481 Gm14007-201ENSMUST00000118288 210 ntBASIC2.7□□□□□ -1.98
Col2a1P28481 Gm11890-201ENSMUST00000119585 417 ntBASIC2.7□□□□□ -1.98
Col2a1P28481 Gm14600-201ENSMUST00000121032 630 ntBASIC2.7□□□□□ -1.98
Col2a1P28481 Gm13555-201ENSMUST00000121668 319 ntBASIC2.7□□□□□ -1.98
Col2a1P28481 Defa27-201ENSMUST00000167683 282 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
Col2a1P28481 Vmn1r88-201ENSMUST00000171783 951 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
Col2a1P28481 Tspy-ps-202ENSMUST00000172304 321 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
Col2a1P28481 Spanxn4-201ENSMUST00000172433 424 ntBASIC2.7□□□□□ -1.98
Col2a1P28481 Gm21874-201ENSMUST00000178374 699 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
Col2a1P28481 Gm22252-201ENSMUST00000179316 79 ntBASIC2.7□□□□□ -1.98
Col2a1P28481 Gm24969-201ENSMUST00000180331 79 ntBASIC2.7□□□□□ -1.98
Col2a1P28481 Gm28541-201ENSMUST00000185206 442 ntTSL 5 BASIC2.7□□□□□ -1.98
Col2a1P28481 Gm28399-201ENSMUST00000186221 318 ntBASIC2.7□□□□□ -1.98
Col2a1P28481 Gm28572-201ENSMUST00000187444 318 ntBASIC2.7□□□□□ -1.98
Col2a1P28481 Gm28811-201ENSMUST00000190650 442 ntTSL 5 BASIC2.7□□□□□ -1.98
Col2a1P28481 Gm29524-201ENSMUST00000190819 699 ntBASIC2.7□□□□□ -1.98
Col2a1P28481 Gm37808-201ENSMUST00000192038 442 ntTSL 5 BASIC2.7□□□□□ -1.98
Col2a1P28481 Gm37291-201ENSMUST00000195637 533 ntTSL 5 BASIC2.7□□□□□ -1.98
Col2a1P28481 Igkv12-49-201ENSMUST00000197714 278 ntBASIC2.7□□□□□ -1.98
Col2a1P28481 Gm44477-201ENSMUST00000199661 110 ntBASIC2.7□□□□□ -1.98
Col2a1P28481 Olfr850-202ENSMUST00000211832 947 ntAPPRIS ALT2 BASIC2.7□□□□□ -1.98
Col2a1P28481 Olfr966-ps1-201ENSMUST00000214875 577 ntBASIC2.7□□□□□ -1.98
Col2a1P28481 AC152979.4-201ENSMUST00000219893 379 ntBASIC2.7□□□□□ -1.98
Col2a1P28481 AC156559.1-201ENSMUST00000224158 222 ntBASIC2.7□□□□□ -1.98
Col2a1P28481 Vmn1r20-201ENSMUST00000226808 912 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
Col2a1P28481 AC129017.1-201ENSMUST00000228363 270 ntBASIC2.7□□□□□ -1.98
Col2a1P28481 Gm22578-201ENSMUST00000083730 107 ntBASIC2.7□□□□□ -1.98
Col2a1P28481 Gm13212-201ENSMUST00000097794 1221 ntTSL 5 BASIC2.7□□□□□ -1.98
Col2a1P28481 Defa-ps18-201ENSMUST00000098889 371 ntBASIC2.7□□□□□ -1.98
Col2a1P28481 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
Col2a1P28481 Pak3-205ENSMUST00000112868 8163 ntAPPRIS P3 TSL 5 BASIC2.7□□□□□ -1.98
Col2a1P28481 Olfr810-202ENSMUST00000214206 4809 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
Col2a1P28481 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
Col2a1P28481 Gm14804-201ENSMUST00000122322 508 ntBASIC2.69□□□□□ -1.98
Col2a1P28481 Gm14905-201ENSMUST00000122351 639 ntBASIC2.69□□□□□ -1.98
Col2a1P28481 Gm24962-201ENSMUST00000157917 109 ntBASIC2.69□□□□□ -1.98
Col2a1P28481 Gm26001-201ENSMUST00000157989 103 ntBASIC2.69□□□□□ -1.98
Col2a1P28481 Gm22803-201ENSMUST00000158049 283 ntBASIC2.69□□□□□ -1.98
Col2a1P28481 Gm24768-201ENSMUST00000158512 94 ntBASIC2.69□□□□□ -1.98
Col2a1P28481 Ear-ps7-201ENSMUST00000161287 442 ntBASIC2.69□□□□□ -1.98
Col2a1P28481 Eif3s6-ps2-201ENSMUST00000163304 219 ntBASIC2.69□□□□□ -1.98
Col2a1P28481 Gm17655-201ENSMUST00000167969 255 ntBASIC2.69□□□□□ -1.98
Col2a1P28481 Gm2930-201ENSMUST00000170403 474 ntBASIC2.69□□□□□ -1.98
Col2a1P28481 Vmn1r-ps40-201ENSMUST00000172862 343 ntBASIC2.69□□□□□ -1.98
Col2a1P28481 Zfp950-206ENSMUST00000178819 171 ntBASIC2.69□□□□□ -1.98
Col2a1P28481 1700022E09Rik-202ENSMUST00000188342 387 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
Col2a1P28481 Gm37987-201ENSMUST00000194999 825 ntBASIC2.69□□□□□ -1.98
Col2a1P28481 Gm18340-201ENSMUST00000196342 609 ntBASIC2.69□□□□□ -1.98
Col2a1P28481 Gm43659-201ENSMUST00000200894 628 ntBASIC2.69□□□□□ -1.98
Col2a1P28481 Gm19761-201ENSMUST00000205372 391 ntBASIC2.69□□□□□ -1.98
Col2a1P28481 Gm39231-201ENSMUST00000209813 501 ntTSL 5 BASIC2.69□□□□□ -1.98
Retrieved 100 of 76,532 protein–RNA pairs in 120.8 ms