Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Olfr381-202ENSMUST00000119863 1065 ntAPPRIS P1 TSL 3 BASIC2.36□□□□□ -2.03
Sdc1P18828 Gm15452-201ENSMUST00000119877 240 ntBASIC2.36□□□□□ -2.03
Sdc1P18828 Gm14101-201ENSMUST00000121502 473 ntBASIC2.36□□□□□ -2.03
Sdc1P18828 Gm14694-201ENSMUST00000121856 282 ntBASIC2.36□□□□□ -2.03
Sdc1P18828 Gm13406-201ENSMUST00000121991 256 ntBASIC2.36□□□□□ -2.03
Sdc1P18828 Sycp3-203ENSMUST00000125612 1169 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
Sdc1P18828 Gm15461-201ENSMUST00000143488 235 ntTSL 3 BASIC2.36□□□□□ -2.03
Sdc1P18828 Gm14902-201ENSMUST00000145576 1007 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
Sdc1P18828 Gm23599-201ENSMUST00000157261 251 ntBASIC2.36□□□□□ -2.03
Sdc1P18828 Gm22330-201ENSMUST00000158068 115 ntBASIC2.36□□□□□ -2.03
Sdc1P18828 Vmn1r18-201ENSMUST00000164732 1087 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Sdc1P18828 Gm17063-201ENSMUST00000168135 456 ntBASIC2.36□□□□□ -2.03
Sdc1P18828 Vmn2r-ps73-201ENSMUST00000173890 1194 ntBASIC2.36□□□□□ -2.03
Sdc1P18828 Gm26195-201ENSMUST00000175035 101 ntBASIC2.36□□□□□ -2.03
Sdc1P18828 Gm25476-201ENSMUST00000175125 185 ntBASIC2.36□□□□□ -2.03
Sdc1P18828 1700025F22Rik-202ENSMUST00000180678 658 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
Sdc1P18828 Mir6353-201ENSMUST00000183596 113 ntBASIC2.36□□□□□ -2.03
Sdc1P18828 2900035J10Rik-201ENSMUST00000194966 532 ntBASIC2.36□□□□□ -2.03
Sdc1P18828 Igkv2-105-201ENSMUST00000196931 377 ntBASIC2.36□□□□□ -2.03
Sdc1P18828 Gm15235-201ENSMUST00000200572 194 ntBASIC2.36□□□□□ -2.03
Sdc1P18828 Gm45173-201ENSMUST00000206819 305 ntBASIC2.36□□□□□ -2.03
Sdc1P18828 AC174457.1-201ENSMUST00000215932 226 ntBASIC2.36□□□□□ -2.03
Sdc1P18828 Olfr946-ps1-201ENSMUST00000217547 341 ntBASIC2.36□□□□□ -2.03
Sdc1P18828 5430401H09Rik-201ENSMUST00000218145 1076 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
Sdc1P18828 Gm7745-202ENSMUST00000222914 567 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
Sdc1P18828 Znrd1as-201ENSMUST00000040177 976 ntAPPRIS P2 TSL 1 (best) BASIC2.36□□□□□ -2.03
Sdc1P18828 Sprr2h-201ENSMUST00000059845 752 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Sdc1P18828 Gm6369-201ENSMUST00000069626 412 ntBASIC2.36□□□□□ -2.03
Sdc1P18828 Gm23733-201ENSMUST00000083750 106 ntBASIC2.36□□□□□ -2.03
Sdc1P18828 Cyp3a44-201ENSMUST00000067479 1962 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Sdc1P18828 Gm42659-201ENSMUST00000196955 1754 ntBASIC2.36□□□□□ -2.03
Sdc1P18828 Krtap24-1-201ENSMUST00000052512 1571 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Sdc1P18828 Gm13757-202ENSMUST00000179450 4383 ntAPPRIS P1 TSL 2 BASIC2.35□□□□□ -2.03
Sdc1P18828 Olfr597-202ENSMUST00000216456 2727 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
Sdc1P18828 Olfr1218-203ENSMUST00000215048 3900 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
Sdc1P18828 Mir499-201ENSMUST00000102357 79 ntBASIC2.35□□□□□ -2.03
Sdc1P18828 Rpl31-ps22-201ENSMUST00000117961 337 ntBASIC2.35□□□□□ -2.03
Sdc1P18828 Gm14172-201ENSMUST00000118255 644 ntBASIC2.35□□□□□ -2.03
Sdc1P18828 Gm13349-201ENSMUST00000118436 411 ntBASIC2.35□□□□□ -2.03
Sdc1P18828 Mup-ps14-201ENSMUST00000118437 532 ntBASIC2.35□□□□□ -2.03
Sdc1P18828 Gm14945-201ENSMUST00000119556 1118 ntBASIC2.35□□□□□ -2.03
Sdc1P18828 Gm14843-201ENSMUST00000119596 212 ntBASIC2.35□□□□□ -2.03
Sdc1P18828 Mup-ps2-201ENSMUST00000142602 533 ntBASIC2.35□□□□□ -2.03
Sdc1P18828 Gm24876-201ENSMUST00000158780 92 ntBASIC2.35□□□□□ -2.03
Sdc1P18828 Gm16055-201ENSMUST00000161366 626 ntTSL 2 BASIC2.35□□□□□ -2.03
Sdc1P18828 Vmn1r-ps53-201ENSMUST00000173066 922 ntBASIC2.35□□□□□ -2.03
Sdc1P18828 Vmn1r-ps62-201ENSMUST00000173275 910 ntBASIC2.35□□□□□ -2.03
Sdc1P18828 Vmn1r-ps10-201ENSMUST00000176165 889 ntBASIC2.35□□□□□ -2.03
Sdc1P18828 Gm27676-201ENSMUST00000183669 61 ntBASIC2.35□□□□□ -2.03
Sdc1P18828 Ranbp2-ps8-201ENSMUST00000183723 345 ntBASIC2.35□□□□□ -2.03
Sdc1P18828 Gm37565-201ENSMUST00000192277 491 ntTSL 3 BASIC2.35□□□□□ -2.03
Sdc1P18828 Olfr289-ps1-201ENSMUST00000192834 369 ntBASIC2.35□□□□□ -2.03
Sdc1P18828 Gm44041-201ENSMUST00000203678 396 ntBASIC2.35□□□□□ -2.03
Sdc1P18828 Gm45539-201ENSMUST00000210313 428 ntBASIC2.35□□□□□ -2.03
Sdc1P18828 Gm45551-201ENSMUST00000211459 928 ntBASIC2.35□□□□□ -2.03
Sdc1P18828 AC164629.1-201ENSMUST00000220250 1113 ntBASIC2.35□□□□□ -2.03
Sdc1P18828 Klra7-201ENSMUST00000032286 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
Sdc1P18828 Olfr1462-201ENSMUST00000076832 924 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Sdc1P18828 Olfr954-201ENSMUST00000080329 945 ntAPPRIS P2 BASIC2.35□□□□□ -2.03
Sdc1P18828 Gm25199-201ENSMUST00000083095 104 ntBASIC2.35□□□□□ -2.03
Sdc1P18828 Mir350-201ENSMUST00000083639 99 ntBASIC2.35□□□□□ -2.03
Sdc1P18828 Olfr1282-201ENSMUST00000099618 918 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Sdc1P18828 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
Sdc1P18828 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Sdc1P18828 Olfr1243-202ENSMUST00000144885 3148 ntAPPRIS P1 TSL 3 BASIC2.35□□□□□ -2.03
Sdc1P18828 Gm37320-201ENSMUST00000192781 4953 ntBASIC2.34□□□□□ -2.03
Sdc1P18828 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
Sdc1P18828 Olfr298-204ENSMUST00000217110 3549 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
Sdc1P18828 Gm7145-201ENSMUST00000185381 1794 ntAPPRIS P1 TSL 3 BASIC2.34□□□□□ -2.03
Sdc1P18828 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.03
Sdc1P18828 AC159193.2-201ENSMUST00000220865 4251 ntBASIC2.34□□□□□ -2.03
Sdc1P18828 Olfr1183-201ENSMUST00000102618 912 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
Sdc1P18828 Mir467h-201ENSMUST00000116759 121 ntBASIC2.34□□□□□ -2.03
Sdc1P18828 Gm22486-201ENSMUST00000116815 137 ntBASIC2.34□□□□□ -2.03
Sdc1P18828 Olfr1144-ps1-201ENSMUST00000118227 328 ntBASIC2.34□□□□□ -2.03
Sdc1P18828 Gm15268-201ENSMUST00000118845 352 ntBASIC2.34□□□□□ -2.03
Sdc1P18828 Gm12335-201ENSMUST00000119738 327 ntBASIC2.34□□□□□ -2.03
Sdc1P18828 2810403D21Rik-207ENSMUST00000152089 852 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
Sdc1P18828 Gm23084-201ENSMUST00000157850 114 ntBASIC2.34□□□□□ -2.03
Sdc1P18828 Gm22840-201ENSMUST00000158444 136 ntBASIC2.34□□□□□ -2.03
Sdc1P18828 Gm27893-201ENSMUST00000184408 194 ntBASIC2.34□□□□□ -2.03
Sdc1P18828 Gm32340-201ENSMUST00000192883 259 ntBASIC2.34□□□□□ -2.03
Sdc1P18828 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC2.34□□□□□ -2.03
Sdc1P18828 Gm29747-201ENSMUST00000194764 585 ntBASIC2.34□□□□□ -2.03
Sdc1P18828 Igkv13-61-1-201ENSMUST00000198255 296 ntBASIC2.34□□□□□ -2.03
Sdc1P18828 Gm43746-201ENSMUST00000200028 317 ntBASIC2.34□□□□□ -2.03
Sdc1P18828 Gm2189-201ENSMUST00000201419 429 ntBASIC2.34□□□□□ -2.03
Sdc1P18828 Olfr442-ps1-201ENSMUST00000204261 316 ntBASIC2.34□□□□□ -2.03
Sdc1P18828 Gm44748-201ENSMUST00000206040 658 ntTSL 5 BASIC2.34□□□□□ -2.03
Sdc1P18828 Gm9967-203ENSMUST00000206903 408 ntTSL 3 BASIC2.34□□□□□ -2.03
Sdc1P18828 Gm45049-201ENSMUST00000207586 591 ntBASIC2.34□□□□□ -2.03
Sdc1P18828 Gm5373-201ENSMUST00000212113 1050 ntBASIC2.34□□□□□ -2.03
Sdc1P18828 Gm8231-201ENSMUST00000221617 783 ntBASIC2.34□□□□□ -2.03
Sdc1P18828 AC154576.2-202ENSMUST00000223916 688 ntBASIC2.34□□□□□ -2.03
Sdc1P18828 AC124562.1-201ENSMUST00000224673 337 ntBASIC2.34□□□□□ -2.03
Sdc1P18828 AC130823.2-201ENSMUST00000226169 290 ntBASIC2.34□□□□□ -2.03
Sdc1P18828 AC161758.2-201ENSMUST00000228513 218 ntBASIC2.34□□□□□ -2.03
Sdc1P18828 Gm7257-201ENSMUST00000041537 519 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
Sdc1P18828 Defb13-201ENSMUST00000060587 452 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
Sdc1P18828 Gm26055-201ENSMUST00000083038 107 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms