Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm8121-201ENSMUST00000153583 499 ntBASIC2.2□□□□□ -2.06
Col1a1P11087 Gm3851-201ENSMUST00000168653 318 ntBASIC2.2□□□□□ -2.06
Col1a1P11087 Gm17929-201ENSMUST00000186851 627 ntBASIC2.2□□□□□ -2.06
Col1a1P11087 Gm37778-201ENSMUST00000191732 190 ntBASIC2.2□□□□□ -2.06
Col1a1P11087 Gm37428-201ENSMUST00000193886 137 ntBASIC2.2□□□□□ -2.06
Col1a1P11087 Gm40292-201ENSMUST00000202383 553 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
Col1a1P11087 4930402F11Rik-203ENSMUST00000208289 606 ntTSL 3 BASIC2.2□□□□□ -2.06
Col1a1P11087 Gm20474-202ENSMUST00000220772 462 ntTSL 5 BASIC2.2□□□□□ -2.06
Col1a1P11087 AC113031.4-201ENSMUST00000228381 514 ntBASIC2.2□□□□□ -2.06
Col1a1P11087 Gm24319-201ENSMUST00000083389 107 ntBASIC2.2□□□□□ -2.06
Col1a1P11087 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
Col1a1P11087 Gm44821-201ENSMUST00000208212 2002 ntBASIC2.19□□□□□ -2.06
Col1a1P11087 Gm12814-201ENSMUST00000117091 846 ntBASIC2.19□□□□□ -2.06
Col1a1P11087 Gm11433-201ENSMUST00000118318 228 ntBASIC2.19□□□□□ -2.06
Col1a1P11087 Gm14927-201ENSMUST00000120283 454 ntBASIC2.19□□□□□ -2.06
Col1a1P11087 Gm13366-201ENSMUST00000122198 970 ntBASIC2.19□□□□□ -2.06
Col1a1P11087 Gm23234-201ENSMUST00000157304 134 ntBASIC2.19□□□□□ -2.06
Col1a1P11087 Gm16490-201ENSMUST00000165299 351 ntBASIC2.19□□□□□ -2.06
Col1a1P11087 1700003C15Rik-202ENSMUST00000188236 710 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
Col1a1P11087 Gm44349-201ENSMUST00000197048 123 ntBASIC2.19□□□□□ -2.06
Col1a1P11087 Igkv13-80-1-201ENSMUST00000197926 255 ntBASIC2.19□□□□□ -2.06
Col1a1P11087 Gm43406-201ENSMUST00000200356 334 ntBASIC2.19□□□□□ -2.06
Col1a1P11087 Gm29926-201ENSMUST00000201443 660 ntTSL 3 BASIC2.19□□□□□ -2.06
Col1a1P11087 Gm34983-201ENSMUST00000219484 396 ntTSL 3 BASIC2.19□□□□□ -2.06
Col1a1P11087 AC141642.1-201ENSMUST00000220598 229 ntBASIC2.19□□□□□ -2.06
Col1a1P11087 AC159622.3-201ENSMUST00000221010 361 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
Col1a1P11087 AC122465.2-201ENSMUST00000221774 354 ntBASIC2.19□□□□□ -2.06
Col1a1P11087 CR974485.1-201ENSMUST00000222408 402 ntBASIC2.19□□□□□ -2.06
Col1a1P11087 AC117656.3-204ENSMUST00000225656 859 ntBASIC2.19□□□□□ -2.06
Col1a1P11087 4930522H14Rik-201ENSMUST00000082306 849 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
Col1a1P11087 Cep41-210ENSMUST00000169422 438 ntTSL 3 BASIC2.18□□□□□ -2.06
Col1a1P11087 Gm23267-201ENSMUST00000178490 132 ntBASIC2.18□□□□□ -2.06
Col1a1P11087 Gm27544-201ENSMUST00000185069 155 ntBASIC2.18□□□□□ -2.06
Col1a1P11087 Gm28794-201ENSMUST00000185276 136 ntBASIC2.18□□□□□ -2.06
Col1a1P11087 Gm28763-201ENSMUST00000188870 166 ntTSL 5 BASIC2.18□□□□□ -2.06
Col1a1P11087 Gm29579-201ENSMUST00000190820 166 ntTSL 5 BASIC2.18□□□□□ -2.06
Col1a1P11087 Igkv15-101-1-201ENSMUST00000196661 258 ntBASIC2.18□□□□□ -2.06
Col1a1P11087 Olfr689-201ENSMUST00000098153 1076 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
Col1a1P11087 Olfr1195-201ENSMUST00000099818 927 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
Col1a1P11087 Gm37303-201ENSMUST00000194202 1559 ntBASIC2.18□□□□□ -2.06
Col1a1P11087 Gm43201-201ENSMUST00000195925 3416 ntBASIC2.17□□□□□ -2.06
Col1a1P11087 Olfr799-202ENSMUST00000213820 1627 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Col1a1P11087 Gm12876-201ENSMUST00000120975 408 ntBASIC2.17□□□□□ -2.06
Col1a1P11087 Gm23183-201ENSMUST00000122595 323 ntBASIC2.17□□□□□ -2.06
Col1a1P11087 Gm14271-201ENSMUST00000137886 630 ntTSL 3 BASIC2.17□□□□□ -2.06
Col1a1P11087 Mir1927-201ENSMUST00000158579 109 ntBASIC2.17□□□□□ -2.06
Col1a1P11087 Gm23967-201ENSMUST00000175062 78 ntBASIC2.17□□□□□ -2.06
Col1a1P11087 Gm15143-201ENSMUST00000178180 714 ntBASIC2.17□□□□□ -2.06
Col1a1P11087 Olfr1055-202ENSMUST00000188023 939 ntBASIC2.17□□□□□ -2.06
Col1a1P11087 Gm3489-201ENSMUST00000190083 528 ntBASIC2.17□□□□□ -2.06
Col1a1P11087 Fam24a-202ENSMUST00000207439 711 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Col1a1P11087 Gm45830-201ENSMUST00000212945 344 ntTSL 5 BASIC2.17□□□□□ -2.06
Col1a1P11087 Gm6812-201ENSMUST00000074894 525 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
Col1a1P11087 1700020N15Rik-201ENSMUST00000075654 525 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
Col1a1P11087 Olfr1040-201ENSMUST00000099909 942 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Col1a1P11087 Vmn2r74-201ENSMUST00000166355 2562 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Col1a1P11087 Zfp984-201ENSMUST00000105734 2729 ntAPPRIS P1 TSL 3 BASIC2.16□□□□□ -2.06
Col1a1P11087 Zfp930-201ENSMUST00000110216 1323 ntTSL 5 BASIC2.16□□□□□ -2.06
Col1a1P11087 Sult1b1-201ENSMUST00000031199 2604 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Col1a1P11087 Gm14819-201ENSMUST00000101645 928 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Col1a1P11087 Gm25728-201ENSMUST00000104525 159 ntBASIC2.16□□□□□ -2.06
Col1a1P11087 Gm14882-201ENSMUST00000117216 218 ntBASIC2.16□□□□□ -2.06
Col1a1P11087 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC2.16□□□□□ -2.06
Col1a1P11087 Zfp965-204ENSMUST00000143490 297 ntTSL 5 BASIC2.16□□□□□ -2.06
Col1a1P11087 Gm22036-201ENSMUST00000157279 215 ntBASIC2.16□□□□□ -2.06
Col1a1P11087 Mir5098-201ENSMUST00000175320 82 ntBASIC2.16□□□□□ -2.06
Col1a1P11087 Gm21732-201ENSMUST00000179309 1083 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Col1a1P11087 Gm18660-201ENSMUST00000199542 629 ntBASIC2.16□□□□□ -2.06
Col1a1P11087 Gm6112-201ENSMUST00000208037 629 ntBASIC2.16□□□□□ -2.06
Col1a1P11087 AC154532.2-201ENSMUST00000228947 598 ntBASIC2.16□□□□□ -2.06
Col1a1P11087 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Col1a1P11087 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC2.15□□□□□ -2.06
Col1a1P11087 Gm44438-201ENSMUST00000204388 3236 ntBASIC2.15□□□□□ -2.06
Col1a1P11087 Hnmt-202ENSMUST00000114497 994 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
Col1a1P11087 Gm12782-201ENSMUST00000117519 727 ntBASIC2.15□□□□□ -2.06
Col1a1P11087 n-R5s191-201ENSMUST00000122724 116 ntBASIC2.15□□□□□ -2.06
Col1a1P11087 Platr32-201ENSMUST00000148597 394 ntTSL 5 BASIC2.15□□□□□ -2.06
Col1a1P11087 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC2.15□□□□□ -2.06
Col1a1P11087 Vmn2r-ps124-201ENSMUST00000176236 903 ntBASIC2.15□□□□□ -2.06
Col1a1P11087 Gm27468-201ENSMUST00000183577 106 ntBASIC2.15□□□□□ -2.06
Col1a1P11087 Olfr780-201ENSMUST00000063168 1025 ntAPPRIS P1 BASIC2.15□□□□□ -2.06
Col1a1P11087 Gm8675-201ENSMUST00000201408 1856 ntBASIC2.15□□□□□ -2.07
Col1a1P11087 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
Col1a1P11087 Gm2869-201ENSMUST00000124359 2621 ntBASIC2.15□□□□□ -2.07
Col1a1P11087 Gm44133-202ENSMUST00000204450 2586 ntBASIC2.14□□□□□ -2.07
Col1a1P11087 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC2.14□□□□□ -2.07
Col1a1P11087 Gm22673-201ENSMUST00000104415 131 ntBASIC2.14□□□□□ -2.07
Col1a1P11087 Gm9009-201ENSMUST00000117321 326 ntBASIC2.14□□□□□ -2.07
Col1a1P11087 Gm11344-201ENSMUST00000122011 335 ntBASIC2.14□□□□□ -2.07
Col1a1P11087 Gm37684-201ENSMUST00000192779 355 ntBASIC2.14□□□□□ -2.07
Col1a1P11087 Gm37037-201ENSMUST00000194475 424 ntBASIC2.14□□□□□ -2.07
Col1a1P11087 Gm36520-201ENSMUST00000200449 400 ntTSL 3 BASIC2.14□□□□□ -2.07
Col1a1P11087 Olfr840-ps1-201ENSMUST00000211827 917 ntBASIC2.14□□□□□ -2.07
Col1a1P11087 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC2.14□□□□□ -2.07
Col1a1P11087 AC122393.1-201ENSMUST00000226570 319 ntBASIC2.14□□□□□ -2.07
Col1a1P11087 Gm25796-201ENSMUST00000082645 163 ntBASIC2.14□□□□□ -2.07
Col1a1P11087 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
Col1a1P11087 Gm42448-201ENSMUST00000197122 2644 ntBASIC2.14□□□□□ -2.07
Col1a1P11087 Gm22486-201ENSMUST00000116815 137 ntBASIC2.14□□□□□ -2.07
Col1a1P11087 Gm15714-201ENSMUST00000117168 250 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 89.1 ms