Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Gm6325-201ENSMUST00000122015 3114 ntBASIC3.64□□□□□ -1.83
Col3a1P08121 4930430A15Rik-201ENSMUST00000028577 1840 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Col3a1P08121 Gm15095-201ENSMUST00000118996 1430 ntBASIC3.64□□□□□ -1.83
Col3a1P08121 Zfp711-201ENSMUST00000071814 3817 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
Col3a1P08121 Gm45848-201ENSMUST00000212932 1871 ntTSL 5 BASIC3.63□□□□□ -1.83
Col3a1P08121 Obscn-201ENSMUST00000020732 23483 ntTSL 5 BASIC3.63□□□□□ -1.83
Col3a1P08121 Snord116l9-201ENSMUST00000101891 94 ntBASIC3.63□□□□□ -1.83
Col3a1P08121 Gm26504-201ENSMUST00000102033 94 ntBASIC3.63□□□□□ -1.83
Col3a1P08121 Mir466i-201ENSMUST00000116924 121 ntBASIC3.63□□□□□ -1.83
Col3a1P08121 Olfr379-ps1-201ENSMUST00000117349 934 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Col3a1P08121 Gm11522-201ENSMUST00000120533 176 ntBASIC3.63□□□□□ -1.83
Col3a1P08121 Gm12723-201ENSMUST00000120700 451 ntBASIC3.63□□□□□ -1.83
Col3a1P08121 Gm11965-201ENSMUST00000122017 277 ntBASIC3.63□□□□□ -1.83
Col3a1P08121 Gm12092-201ENSMUST00000125194 600 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Col3a1P08121 Gm16373-201ENSMUST00000129517 303 ntBASIC3.63□□□□□ -1.83
Col3a1P08121 Gm25669-201ENSMUST00000157699 112 ntBASIC3.63□□□□□ -1.83
Col3a1P08121 Gm26028-201ENSMUST00000158660 294 ntBASIC3.63□□□□□ -1.83
Col3a1P08121 Gm15914-201ENSMUST00000161922 309 ntBASIC3.63□□□□□ -1.83
Col3a1P08121 Fcf1-202ENSMUST00000171040 731 ntTSL 3 BASIC3.63□□□□□ -1.83
Col3a1P08121 Gm15564-202ENSMUST00000173605 402 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Col3a1P08121 Gm22258-201ENSMUST00000177645 94 ntBASIC3.63□□□□□ -1.83
Col3a1P08121 Gm26502-201ENSMUST00000177732 94 ntBASIC3.63□□□□□ -1.83
Col3a1P08121 Snord116l13-201ENSMUST00000177737 94 ntBASIC3.63□□□□□ -1.83
Col3a1P08121 Gm25350-201ENSMUST00000177849 94 ntBASIC3.63□□□□□ -1.83
Col3a1P08121 Snord116l15-201ENSMUST00000177940 94 ntBASIC3.63□□□□□ -1.83
Col3a1P08121 Gm23446-201ENSMUST00000177977 94 ntBASIC3.63□□□□□ -1.83
Col3a1P08121 Snord116l4-201ENSMUST00000177982 94 ntBASIC3.63□□□□□ -1.83
Col3a1P08121 Gm26201-201ENSMUST00000178047 94 ntBASIC3.63□□□□□ -1.83
Col3a1P08121 Gm24711-201ENSMUST00000178062 94 ntBASIC3.63□□□□□ -1.83
Col3a1P08121 Gm24609-201ENSMUST00000178166 94 ntBASIC3.63□□□□□ -1.83
Col3a1P08121 Gm23265-201ENSMUST00000178321 94 ntBASIC3.63□□□□□ -1.83
Col3a1P08121 Gm13698-201ENSMUST00000178325 732 ntTSL 5 BASIC3.63□□□□□ -1.83
Col3a1P08121 Gm22812-201ENSMUST00000178329 94 ntBASIC3.63□□□□□ -1.83
Col3a1P08121 Snord116l3-201ENSMUST00000178370 94 ntBASIC3.63□□□□□ -1.83
Col3a1P08121 Gm26246-201ENSMUST00000178388 94 ntBASIC3.63□□□□□ -1.83
Col3a1P08121 Gm22131-201ENSMUST00000178415 94 ntBASIC3.63□□□□□ -1.83
Col3a1P08121 Gm25155-201ENSMUST00000178450 94 ntBASIC3.63□□□□□ -1.83
Col3a1P08121 Gm24760-201ENSMUST00000178530 94 ntBASIC3.63□□□□□ -1.83
Col3a1P08121 Gm26032-201ENSMUST00000178535 94 ntBASIC3.63□□□□□ -1.83
Col3a1P08121 Gm22285-201ENSMUST00000178576 94 ntBASIC3.63□□□□□ -1.83
Col3a1P08121 Gm22776-201ENSMUST00000178634 94 ntBASIC3.63□□□□□ -1.83
Col3a1P08121 Gm13694-202ENSMUST00000178655 732 ntTSL 5 BASIC3.63□□□□□ -1.83
Col3a1P08121 Gm22417-201ENSMUST00000178656 94 ntBASIC3.63□□□□□ -1.83
Col3a1P08121 Snord116l2-201ENSMUST00000178675 94 ntBASIC3.63□□□□□ -1.83
Col3a1P08121 Gm26270-201ENSMUST00000178690 94 ntBASIC3.63□□□□□ -1.83
Col3a1P08121 Snord116l16-201ENSMUST00000178777 94 ntBASIC3.63□□□□□ -1.83
Col3a1P08121 Gm25074-201ENSMUST00000178782 94 ntBASIC3.63□□□□□ -1.83
Col3a1P08121 Gm25210-201ENSMUST00000178813 94 ntBASIC3.63□□□□□ -1.83
Col3a1P08121 Gm25157-201ENSMUST00000178914 94 ntBASIC3.63□□□□□ -1.83
Col3a1P08121 Gm23313-201ENSMUST00000178931 94 ntBASIC3.63□□□□□ -1.83
Col3a1P08121 Snord116l17-201ENSMUST00000178936 94 ntBASIC3.63□□□□□ -1.83
Col3a1P08121 Gm23089-201ENSMUST00000178947 94 ntBASIC3.63□□□□□ -1.83
Col3a1P08121 Gm22046-201ENSMUST00000179027 94 ntBASIC3.63□□□□□ -1.83
Col3a1P08121 Snord116l10-201ENSMUST00000179053 94 ntBASIC3.63□□□□□ -1.83
Col3a1P08121 Gm26365-201ENSMUST00000179177 94 ntBASIC3.63□□□□□ -1.83
Col3a1P08121 Gm23767-201ENSMUST00000179278 94 ntBASIC3.63□□□□□ -1.83
Col3a1P08121 Gm24153-201ENSMUST00000179280 94 ntBASIC3.63□□□□□ -1.83
Col3a1P08121 Gm13696-201ENSMUST00000179311 732 ntTSL 5 BASIC3.63□□□□□ -1.83
Col3a1P08121 Gm25597-201ENSMUST00000179388 94 ntBASIC3.63□□□□□ -1.83
Col3a1P08121 Gm13693-202ENSMUST00000179448 732 ntTSL 5 BASIC3.63□□□□□ -1.83
Col3a1P08121 Gm13695-202ENSMUST00000179504 732 ntTSL 5 BASIC3.63□□□□□ -1.83
Col3a1P08121 Snord116l1-201ENSMUST00000179518 94 ntBASIC3.63□□□□□ -1.83
Col3a1P08121 Gm13697-202ENSMUST00000179552 732 ntTSL 5 BASIC3.63□□□□□ -1.83
Col3a1P08121 Gm22941-201ENSMUST00000179630 94 ntBASIC3.63□□□□□ -1.83
Col3a1P08121 Gm22631-201ENSMUST00000179656 94 ntBASIC3.63□□□□□ -1.83
Col3a1P08121 Gm25816-201ENSMUST00000179764 94 ntBASIC3.63□□□□□ -1.83
Col3a1P08121 Snord116l12-201ENSMUST00000179816 94 ntBASIC3.63□□□□□ -1.83
Col3a1P08121 Snord116l14-201ENSMUST00000179875 94 ntBASIC3.63□□□□□ -1.83
Col3a1P08121 Snord116l8-201ENSMUST00000179889 94 ntBASIC3.63□□□□□ -1.83
Col3a1P08121 Snord116l7-201ENSMUST00000179895 94 ntBASIC3.63□□□□□ -1.83
Col3a1P08121 Snord116l5-201ENSMUST00000179927 94 ntBASIC3.63□□□□□ -1.83
Col3a1P08121 Gm3543-202ENSMUST00000179947 231 ntTSL 5 BASIC3.63□□□□□ -1.83
Col3a1P08121 Snord116l6-201ENSMUST00000179955 94 ntBASIC3.63□□□□□ -1.83
Col3a1P08121 Gm26188-201ENSMUST00000179963 94 ntBASIC3.63□□□□□ -1.83
Col3a1P08121 Gm25471-201ENSMUST00000180126 94 ntBASIC3.63□□□□□ -1.83
Col3a1P08121 Gm26433-201ENSMUST00000180227 94 ntBASIC3.63□□□□□ -1.83
Col3a1P08121 Snord116l11-201ENSMUST00000180312 94 ntBASIC3.63□□□□□ -1.83
Col3a1P08121 Gm23862-201ENSMUST00000180342 94 ntBASIC3.63□□□□□ -1.83
Col3a1P08121 Gm22128-201ENSMUST00000180346 94 ntBASIC3.63□□□□□ -1.83
Col3a1P08121 1700016P04Rik-201ENSMUST00000186770 429 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Col3a1P08121 4930584F24Rik-203ENSMUST00000197091 954 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Col3a1P08121 Gm42958-201ENSMUST00000197595 318 ntBASIC3.63□□□□□ -1.83
Col3a1P08121 Igkv15-97-201ENSMUST00000197637 339 ntBASIC3.63□□□□□ -1.83
Col3a1P08121 Gm43521-201ENSMUST00000197838 255 ntBASIC3.63□□□□□ -1.83
Col3a1P08121 Gm43107-201ENSMUST00000198729 255 ntBASIC3.63□□□□□ -1.83
Col3a1P08121 Gm42896-201ENSMUST00000201249 1113 ntBASIC3.63□□□□□ -1.83
Col3a1P08121 Gm30146-201ENSMUST00000206564 605 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Col3a1P08121 Gm29920-201ENSMUST00000206876 754 ntBASIC3.63□□□□□ -1.83
Col3a1P08121 Gm7198-201ENSMUST00000219635 1074 ntBASIC3.63□□□□□ -1.83
Col3a1P08121 AC101984.1-201ENSMUST00000219639 402 ntBASIC3.63□□□□□ -1.83
Col3a1P08121 Olfr136-201ENSMUST00000077203 939 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Col3a1P08121 Gm25079-201ENSMUST00000082529 203 ntBASIC3.63□□□□□ -1.83
Col3a1P08121 Mir181a-1-201ENSMUST00000083631 87 ntBASIC3.63□□□□□ -1.83
Col3a1P08121 Gm24490-201ENSMUST00000083803 98 ntBASIC3.63□□□□□ -1.83
Col3a1P08121 Gm10234-201ENSMUST00000089304 60 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Col3a1P08121 Olfr1195-201ENSMUST00000099818 927 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Col3a1P08121 Vmn1r46-204ENSMUST00000228231 13338 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Col3a1P08121 Olfr181-204ENSMUST00000205986 1891 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
Col3a1P08121 Gm34240-201ENSMUST00000192500 1936 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Col3a1P08121 Olfr491-202ENSMUST00000209545 1944 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 87.6 ms