Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Gm25341-201ENSMUST00000157461 268 ntBASIC2.76□□□□□ -1.97
P06344 B230216N24Rik-202ENSMUST00000159353 345 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
P06344 Gm17183-201ENSMUST00000171170 493 ntBASIC2.76□□□□□ -1.97
P06344 Gm3543-202ENSMUST00000179947 231 ntTSL 5 BASIC2.76□□□□□ -1.97
P06344 Pnrc2-203ENSMUST00000180300 171 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
P06344 Gm8676-201ENSMUST00000184206 637 ntBASIC2.76□□□□□ -1.97
P06344 Gm27817-201ENSMUST00000184302 233 ntBASIC2.76□□□□□ -1.97
P06344 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC2.76□□□□□ -1.97
P06344 Gm28802-201ENSMUST00000188624 944 ntBASIC2.76□□□□□ -1.97
P06344 Gm6651-201ENSMUST00000189471 271 ntBASIC2.76□□□□□ -1.97
P06344 Gm37062-201ENSMUST00000195028 701 ntTSL 5 BASIC2.76□□□□□ -1.97
P06344 Gm43729-201ENSMUST00000196949 499 ntTSL 3 BASIC2.76□□□□□ -1.97
P06344 Olfr795-ps1-201ENSMUST00000205245 763 ntBASIC2.76□□□□□ -1.97
P06344 Gm5322-201ENSMUST00000206142 699 ntBASIC2.76□□□□□ -1.97
P06344 Gm19126-201ENSMUST00000207896 509 ntBASIC2.76□□□□□ -1.97
P06344 Gm45513-201ENSMUST00000210228 376 ntBASIC2.76□□□□□ -1.97
P06344 AC168059.2-201ENSMUST00000224473 333 ntBASIC2.76□□□□□ -1.97
P06344 AC124729.1-202ENSMUST00000225587 938 ntBASIC2.76□□□□□ -1.97
P06344 AC124746.2-201ENSMUST00000226594 427 ntBASIC2.76□□□□□ -1.97
P06344 AC160930.1-201ENSMUST00000227194 337 ntBASIC2.76□□□□□ -1.97
P06344 Defb19-201ENSMUST00000053180 394 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
P06344 Olfr1028-201ENSMUST00000080698 3474 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
P06344 Olfr65-201ENSMUST00000106864 2648 ntAPPRIS ALT1 TSL 5 BASIC2.76□□□□□ -1.97
P06344 Tex47-203ENSMUST00000160634 2881 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
P06344 Gm43300-201ENSMUST00000198540 2043 ntBASIC2.76□□□□□ -1.97
P06344 Ctdspl2-202ENSMUST00000110572 4160 ntTSL 5 BASIC2.76□□□□□ -1.97
P06344 Gm37320-201ENSMUST00000192781 4953 ntBASIC2.76□□□□□ -1.97
P06344 Olfr196-202ENSMUST00000205471 1711 ntAPPRIS P1 TSL 3 BASIC2.76□□□□□ -1.97
P06344 Olfr918-202ENSMUST00000215461 3783 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
P06344 Zfp971-202ENSMUST00000108926 1413 ntAPPRIS P1 TSL 3 BASIC2.76□□□□□ -1.97
P06344 Zfp934-202ENSMUST00000101547 2147 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
P06344 Gm45038-201ENSMUST00000207537 3838 ntBASIC2.75□□□□□ -1.97
P06344 Olfr1447-203ENSMUST00000216989 2586 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
P06344 AC115047.2-201ENSMUST00000214421 1848 ntBASIC2.75□□□□□ -1.97
P06344 4930430A15Rik-201ENSMUST00000028577 1840 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
P06344 Zbtb41-201ENSMUST00000039867 8361 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
P06344 Fbxw21-201ENSMUST00000054925 1512 ntAPPRIS P2 TSL 1 (best) BASIC2.75□□□□□ -1.97
P06344 Gm29674-202ENSMUST00000219664 4083 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
P06344 Gm23256-201ENSMUST00000102235 110 ntBASIC2.75□□□□□ -1.97
P06344 Gm26140-201ENSMUST00000103807 110 ntBASIC2.75□□□□□ -1.97
P06344 Gm23175-201ENSMUST00000104371 132 ntBASIC2.75□□□□□ -1.97
P06344 Gm13046-201ENSMUST00000117391 501 ntBASIC2.75□□□□□ -1.97
P06344 Gm11577-201ENSMUST00000118030 737 ntBASIC2.75□□□□□ -1.97
P06344 Olfr1103-ps1-201ENSMUST00000119132 937 ntBASIC2.75□□□□□ -1.97
P06344 Gm15113-201ENSMUST00000119280 836 ntBASIC2.75□□□□□ -1.97
P06344 Gm12891-201ENSMUST00000119358 240 ntBASIC2.75□□□□□ -1.97
P06344 Gm12044-201ENSMUST00000120335 213 ntBASIC2.75□□□□□ -1.97
P06344 Gm22187-201ENSMUST00000157819 129 ntBASIC2.75□□□□□ -1.97
P06344 Gm22516-201ENSMUST00000158266 124 ntBASIC2.75□□□□□ -1.97
P06344 Gm3370-201ENSMUST00000171785 500 ntBASIC2.75□□□□□ -1.97
P06344 Vmn1r-ps24-201ENSMUST00000175772 900 ntBASIC2.75□□□□□ -1.97
P06344 Gm22908-201ENSMUST00000177620 110 ntBASIC2.75□□□□□ -1.97
P06344 Gm24897-201ENSMUST00000179033 107 ntBASIC2.75□□□□□ -1.97
P06344 Gm27599-201ENSMUST00000183758 174 ntBASIC2.75□□□□□ -1.97
P06344 Gm27755-201ENSMUST00000184623 132 ntBASIC2.75□□□□□ -1.97
P06344 Gm28146-201ENSMUST00000185517 701 ntBASIC2.75□□□□□ -1.97
P06344 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC2.75□□□□□ -1.97
P06344 Gm28534-201ENSMUST00000187744 676 ntBASIC2.75□□□□□ -1.97
P06344 Gm29576-201ENSMUST00000188020 678 ntBASIC2.75□□□□□ -1.97
P06344 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
P06344 Gm28354-201ENSMUST00000190904 678 ntBASIC2.75□□□□□ -1.97
P06344 Gm38316-201ENSMUST00000194838 469 ntTSL 5 BASIC2.75□□□□□ -1.97
P06344 Igkv2-105-201ENSMUST00000196931 377 ntBASIC2.75□□□□□ -1.97
P06344 Olfr1470-ps1-201ENSMUST00000208620 949 ntBASIC2.75□□□□□ -1.97
P06344 Gm34838-201ENSMUST00000209231 958 ntTSL 5 BASIC2.75□□□□□ -1.97
P06344 Gm6842-201ENSMUST00000211361 390 ntBASIC2.75□□□□□ -1.97
P06344 4930558N11Rik-204ENSMUST00000211512 516 ntTSL 3 BASIC2.75□□□□□ -1.97
P06344 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC2.75□□□□□ -1.97
P06344 AC111046.1-201ENSMUST00000217715 412 ntBASIC2.75□□□□□ -1.97
P06344 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC2.75□□□□□ -1.97
P06344 AC155167.3-201ENSMUST00000226349 217 ntBASIC2.75□□□□□ -1.97
P06344 AC154484.1-201ENSMUST00000227311 771 ntBASIC2.75□□□□□ -1.97
P06344 AC147628.1-201ENSMUST00000228193 688 ntBASIC2.75□□□□□ -1.97
P06344 Samt4-201ENSMUST00000026029 963 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
P06344 Ly96-201ENSMUST00000026881 632 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
P06344 Gm22740-201ENSMUST00000083439 109 ntBASIC2.75□□□□□ -1.97
P06344 Olfr25-203ENSMUST00000214155 6479 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
P06344 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
P06344 Ms4a14-201ENSMUST00000187467 4065 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
P06344 Olfr855-202ENSMUST00000215587 1797 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
P06344 AC162910.1-201ENSMUST00000221219 1723 ntBASIC2.74□□□□□ -1.97
P06344 Olfr1073-ps1-201ENSMUST00000117635 381 ntBASIC2.74□□□□□ -1.97
P06344 Gm14899-201ENSMUST00000118673 548 ntBASIC2.74□□□□□ -1.97
P06344 Gm14359-201ENSMUST00000118883 424 ntBASIC2.74□□□□□ -1.97
P06344 Gm14360-201ENSMUST00000120670 393 ntBASIC2.74□□□□□ -1.97
P06344 Gm11438-201ENSMUST00000121582 189 ntBASIC2.74□□□□□ -1.97
P06344 Gm15529-201ENSMUST00000121833 994 ntBASIC2.74□□□□□ -1.97
P06344 4930527E20Rik-201ENSMUST00000135700 351 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
P06344 Gm9498-201ENSMUST00000140849 291 ntBASIC2.74□□□□□ -1.97
P06344 Nron-204ENSMUST00000158971 370 ntBASIC2.74□□□□□ -1.97
P06344 Gm21842-201ENSMUST00000177552 498 ntBASIC2.74□□□□□ -1.97
P06344 Gm21626-201ENSMUST00000177791 498 ntBASIC2.74□□□□□ -1.97
P06344 Gm21562-201ENSMUST00000177888 498 ntBASIC2.74□□□□□ -1.97
P06344 Gm21539-201ENSMUST00000177925 498 ntBASIC2.74□□□□□ -1.97
P06344 Gm17469-201ENSMUST00000177942 498 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
P06344 Gm23568-201ENSMUST00000177960 92 ntBASIC2.74□□□□□ -1.97
P06344 Gm17693-201ENSMUST00000178004 498 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
P06344 Gm17361-201ENSMUST00000178121 498 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
P06344 Gm17522-201ENSMUST00000178144 498 ntBASIC2.74□□□□□ -1.97
P06344 Gm21599-201ENSMUST00000178249 498 ntBASIC2.74□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 102.4 ms