Protein–RNA interactions for Protein: P06328

Ig heavy chain V region VH558 B4, mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06328 Gm14602-201ENSMUST00000118625 340 ntBASIC2.07□□□□□ -2.08
P06328 Gm11430-201ENSMUST00000121317 217 ntBASIC2.07□□□□□ -2.08
P06328 Gm15381-201ENSMUST00000121501 1156 ntBASIC2.07□□□□□ -2.08
P06328 n-R5s216-201ENSMUST00000122755 112 ntBASIC2.07□□□□□ -2.08
P06328 Gm12238-201ENSMUST00000127764 124 ntBASIC2.07□□□□□ -2.08
P06328 Gm15130-201ENSMUST00000132464 663 ntAPPRIS P1 TSL 3 BASIC2.07□□□□□ -2.08
P06328 Gm13943-201ENSMUST00000144043 343 ntTSL 5 BASIC2.07□□□□□ -2.08
P06328 4930517O19Rik-202ENSMUST00000145018 571 ntTSL 3 BASIC2.07□□□□□ -2.08
P06328 2810403D21Rik-207ENSMUST00000152089 852 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
P06328 Gm26406-201ENSMUST00000158503 124 ntBASIC2.07□□□□□ -2.08
P06328 Gm23409-201ENSMUST00000158516 237 ntBASIC2.07□□□□□ -2.08
P06328 Gm8392-201ENSMUST00000185647 835 ntBASIC2.07□□□□□ -2.08
P06328 4930452N14Rik-201ENSMUST00000189240 613 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
P06328 Gm17916-203ENSMUST00000189918 324 ntTSL 5 BASIC2.07□□□□□ -2.08
P06328 Gm28072-202ENSMUST00000190486 352 ntTSL 5 BASIC2.07□□□□□ -2.08
P06328 Gm37175-201ENSMUST00000192023 587 ntTSL 5 BASIC2.07□□□□□ -2.08
P06328 Olfr289-ps1-201ENSMUST00000192834 369 ntBASIC2.07□□□□□ -2.08
P06328 Gm30341-201ENSMUST00000194363 289 ntBASIC2.07□□□□□ -2.08
P06328 Gm43355-201ENSMUST00000196541 346 ntBASIC2.07□□□□□ -2.08
P06328 Igkv13-61-1-201ENSMUST00000198255 296 ntBASIC2.07□□□□□ -2.08
P06328 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC2.07□□□□□ -2.08
P06328 Olfr1439-ps1-201ENSMUST00000207089 824 ntBASIC2.07□□□□□ -2.08
P06328 Gm45868-201ENSMUST00000210247 473 ntTSL 3 BASIC2.07□□□□□ -2.08
P06328 Gm45912-201ENSMUST00000210646 543 ntBASIC2.07□□□□□ -2.08
P06328 AC154788.1-201ENSMUST00000225003 340 ntBASIC2.07□□□□□ -2.08
P06328 Mup5-201ENSMUST00000082287 925 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
P06328 Gm22740-201ENSMUST00000083439 109 ntBASIC2.07□□□□□ -2.08
P06328 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC2.07□□□□□ -2.08
P06328 Vmn2r66-201ENSMUST00000124773 2556 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
P06328 4930595M18Rik-201ENSMUST00000080083 2644 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
P06328 Olfr657-203ENSMUST00000215454 2397 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
P06328 Olfr1484-205ENSMUST00000216369 3764 ntTSL 5 BASIC2.06□□□□□ -2.08
P06328 Gm25213-201ENSMUST00000102388 113 ntBASIC2.06□□□□□ -2.08
P06328 Gm25466-201ENSMUST00000103995 132 ntBASIC2.06□□□□□ -2.08
P06328 Tas2r122-201ENSMUST00000105077 930 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
P06328 Gm14901-201ENSMUST00000119001 283 ntBASIC2.06□□□□□ -2.08
P06328 Mup-ps15-201ENSMUST00000121741 539 ntBASIC2.06□□□□□ -2.08
P06328 Gm14363-201ENSMUST00000122304 409 ntBASIC2.06□□□□□ -2.08
P06328 Crem-231ENSMUST00000152108 654 ntTSL 5 BASIC2.06□□□□□ -2.08
P06328 Gm22563-201ENSMUST00000157333 269 ntBASIC2.06□□□□□ -2.08
P06328 Gm22330-201ENSMUST00000158068 115 ntBASIC2.06□□□□□ -2.08
P06328 Snord53-201ENSMUST00000175146 78 ntBASIC2.06□□□□□ -2.08
P06328 Snord93-201ENSMUST00000175580 71 ntBASIC2.06□□□□□ -2.08
P06328 Vmn2r-ps118-201ENSMUST00000176785 908 ntBASIC2.06□□□□□ -2.08
P06328 Gm23190-201ENSMUST00000180307 64 ntBASIC2.06□□□□□ -2.08
P06328 Gm27330-201ENSMUST00000184689 132 ntBASIC2.06□□□□□ -2.08
P06328 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC2.06□□□□□ -2.08
P06328 Gm28802-201ENSMUST00000188624 944 ntBASIC2.06□□□□□ -2.08
P06328 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
P06328 4921527H02Rik-202ENSMUST00000196005 947 ntBASIC2.06□□□□□ -2.08
P06328 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC2.06□□□□□ -2.08
P06328 4930584F24Rik-203ENSMUST00000197091 954 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
P06328 Gm31520-201ENSMUST00000203048 733 ntBASIC2.06□□□□□ -2.08
P06328 Med7-201ENSMUST00000020665 1193 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
P06328 Olfr511-ps1-201ENSMUST00000207188 217 ntBASIC2.06□□□□□ -2.08
P06328 4930401A07Rik-201ENSMUST00000214657 746 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
P06328 AC114575.1-201ENSMUST00000218634 353 ntTSL 3 BASIC2.06□□□□□ -2.08
P06328 AC139754.1-201ENSMUST00000219418 950 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
P06328 AC140285.1-201ENSMUST00000220472 452 ntTSL 3 BASIC2.06□□□□□ -2.08
P06328 Gm7745-202ENSMUST00000222914 567 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
P06328 AC183096.1-201ENSMUST00000226392 130 ntBASIC2.06□□□□□ -2.08
P06328 AC109172.1-201ENSMUST00000227503 187 ntBASIC2.06□□□□□ -2.08
P06328 D130040H23Rik-201ENSMUST00000078257 1218 ntTSL 2 BASIC2.06□□□□□ -2.08
P06328 Defb4-201ENSMUST00000081017 454 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
P06328 Mir137-201ENSMUST00000083635 73 ntBASIC2.06□□□□□ -2.08
P06328 Gm10271-201ENSMUST00000092165 156 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
P06328 Olfr623-202ENSMUST00000213840 3980 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
P06328 Gm3867-202ENSMUST00000181639 2007 ntTSL 2 BASIC2.06□□□□□ -2.08
P06328 Gm10647-201ENSMUST00000098612 2036 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
P06328 Vmn1r13-204ENSMUST00000227421 5235 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
P06328 Gm43665-201ENSMUST00000198672 1659 ntBASIC2.06□□□□□ -2.08
P06328 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
P06328 Gm8473-201ENSMUST00000176697 1885 ntBASIC2.05□□□□□ -2.08
P06328 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC2.05□□□□□ -2.08
P06328 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC2.05□□□□□ -2.08
P06328 Gm14804-201ENSMUST00000122322 508 ntBASIC2.05□□□□□ -2.08
P06328 Gm15279-201ENSMUST00000155593 288 ntBASIC2.05□□□□□ -2.08
P06328 Gm24190-201ENSMUST00000157976 216 ntBASIC2.05□□□□□ -2.08
P06328 Gm23387-201ENSMUST00000158586 107 ntBASIC2.05□□□□□ -2.08
P06328 Gm24876-201ENSMUST00000158780 92 ntBASIC2.05□□□□□ -2.08
P06328 Gm17038-201ENSMUST00000166586 494 ntBASIC2.05□□□□□ -2.08
P06328 Vmn1r115-201ENSMUST00000169374 888 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
P06328 Vmn1r185-201ENSMUST00000171039 1144 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
P06328 Gm20415-201ENSMUST00000172877 423 ntBASIC2.05□□□□□ -2.08
P06328 Gm25476-201ENSMUST00000175125 185 ntBASIC2.05□□□□□ -2.08
P06328 Mir6541-201ENSMUST00000183649 110 ntBASIC2.05□□□□□ -2.08
P06328 Gm33819-201ENSMUST00000194008 1221 ntTSL 3 BASIC2.05□□□□□ -2.08
P06328 Gm42565-201ENSMUST00000197839 572 ntTSL 5 BASIC2.05□□□□□ -2.08
P06328 Gm44118-201ENSMUST00000204665 229 ntBASIC2.05□□□□□ -2.08
P06328 Olfr1464-ps1-201ENSMUST00000208760 923 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
P06328 Gm44594-201ENSMUST00000208982 407 ntBASIC2.05□□□□□ -2.08
P06328 Gm45462-201ENSMUST00000211267 792 ntTSL 5 BASIC2.05□□□□□ -2.08
P06328 Gm35548-201ENSMUST00000214348 441 ntTSL 5 BASIC2.05□□□□□ -2.08
P06328 Gm46436-201ENSMUST00000221851 1294 ntBASIC2.05□□□□□ -2.08
P06328 AL590503.1-201ENSMUST00000222053 321 ntBASIC2.05□□□□□ -2.08
P06328 AC154576.2-202ENSMUST00000223916 688 ntBASIC2.05□□□□□ -2.08
P06328 AC121114.1-201ENSMUST00000228522 570 ntBASIC2.05□□□□□ -2.08
P06328 AC154532.2-201ENSMUST00000228947 598 ntBASIC2.05□□□□□ -2.08
P06328 Tshb-201ENSMUST00000029450 605 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
P06328 Olfr339-201ENSMUST00000071437 930 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 78.3 ms