Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Vmn1r52-201ENSMUST00000079832 930 ntAPPRIS P1 BASIC2.15□□□□□ -2.06
Col5a1O88207 Gm24207-201ENSMUST00000082781 108 ntBASIC2.15□□□□□ -2.06
Col5a1O88207 Gm24319-201ENSMUST00000083389 107 ntBASIC2.15□□□□□ -2.06
Col5a1O88207 Olfr833-ps1-201ENSMUST00000086493 913 ntBASIC2.15□□□□□ -2.06
Col5a1O88207 1700017N19Rik-207ENSMUST00000190708 1945 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.06
Col5a1O88207 Gm45263-201ENSMUST00000210377 1375 ntBASIC2.15□□□□□ -2.07
Col5a1O88207 Olfr777-202ENSMUST00000204573 5407 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
Col5a1O88207 Gm22149-201ENSMUST00000104442 136 ntBASIC2.14□□□□□ -2.07
Col5a1O88207 Gm14579-201ENSMUST00000117068 283 ntBASIC2.14□□□□□ -2.07
Col5a1O88207 Mup-ps14-201ENSMUST00000118437 532 ntBASIC2.14□□□□□ -2.07
Col5a1O88207 Rpl30-ps11-201ENSMUST00000119630 345 ntBASIC2.14□□□□□ -2.07
Col5a1O88207 Mup-ps4-201ENSMUST00000151005 539 ntBASIC2.14□□□□□ -2.07
Col5a1O88207 Gm23387-201ENSMUST00000158586 107 ntBASIC2.14□□□□□ -2.07
Col5a1O88207 Gm2966-201ENSMUST00000166052 481 ntBASIC2.14□□□□□ -2.07
Col5a1O88207 Gm17204-201ENSMUST00000167936 478 ntBASIC2.14□□□□□ -2.07
Col5a1O88207 Vmn1r88-201ENSMUST00000171783 951 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Col5a1O88207 Gm25525-201ENSMUST00000177701 107 ntBASIC2.14□□□□□ -2.07
Col5a1O88207 Gm26178-201ENSMUST00000177706 107 ntBASIC2.14□□□□□ -2.07
Col5a1O88207 Gm26465-201ENSMUST00000178517 107 ntBASIC2.14□□□□□ -2.07
Col5a1O88207 Gm25021-201ENSMUST00000179184 107 ntBASIC2.14□□□□□ -2.07
Col5a1O88207 Gm21900-201ENSMUST00000179612 543 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Col5a1O88207 Gm22995-201ENSMUST00000179670 107 ntBASIC2.14□□□□□ -2.07
Col5a1O88207 Gm24424-201ENSMUST00000179714 107 ntBASIC2.14□□□□□ -2.07
Col5a1O88207 Gm24389-201ENSMUST00000179962 107 ntBASIC2.14□□□□□ -2.07
Col5a1O88207 Gm25672-201ENSMUST00000180111 107 ntBASIC2.14□□□□□ -2.07
Col5a1O88207 Mir6353-201ENSMUST00000183596 113 ntBASIC2.14□□□□□ -2.07
Col5a1O88207 Gm29534-201ENSMUST00000187328 382 ntBASIC2.14□□□□□ -2.07
Col5a1O88207 Gm29163-201ENSMUST00000188029 107 ntBASIC2.14□□□□□ -2.07
Col5a1O88207 4921511E07Rik-201ENSMUST00000194790 827 ntBASIC2.14□□□□□ -2.07
Col5a1O88207 Gm43494-201ENSMUST00000197672 388 ntBASIC2.14□□□□□ -2.07
Col5a1O88207 Gm42976-201ENSMUST00000200313 222 ntBASIC2.14□□□□□ -2.07
Col5a1O88207 Gm45380-201ENSMUST00000210465 315 ntBASIC2.14□□□□□ -2.07
Col5a1O88207 Gm18892-201ENSMUST00000217628 881 ntBASIC2.14□□□□□ -2.07
Col5a1O88207 AC116726.2-201ENSMUST00000217629 986 ntBASIC2.14□□□□□ -2.07
Col5a1O88207 AC105407.3-201ENSMUST00000224161 648 ntBASIC2.14□□□□□ -2.07
Col5a1O88207 Vmn1r20-201ENSMUST00000226808 912 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Col5a1O88207 Defb10-201ENSMUST00000054162 298 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
Col5a1O88207 Olfr820-201ENSMUST00000059244 1061 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Col5a1O88207 Olfr921-201ENSMUST00000071681 1181 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Col5a1O88207 Gm23815-201ENSMUST00000083231 107 ntBASIC2.14□□□□□ -2.07
Col5a1O88207 Gm23520-201ENSMUST00000093736 107 ntBASIC2.14□□□□□ -2.07
Col5a1O88207 Olfr172-201ENSMUST00000095991 1089 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Col5a1O88207 Gm7648-201ENSMUST00000173036 1658 ntBASIC2.14□□□□□ -2.07
Col5a1O88207 Olfr1052-203ENSMUST00000217166 1694 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Col5a1O88207 Adam29-201ENSMUST00000053441 2726 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
Col5a1O88207 Gulp1-206ENSMUST00000162600 2798 ntTSL 5 BASIC2.14□□□□□ -2.07
Col5a1O88207 Gm10477-201ENSMUST00000101552 165 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Col5a1O88207 Gm12584-201ENSMUST00000117109 1105 ntBASIC2.14□□□□□ -2.07
Col5a1O88207 Gm15148-201ENSMUST00000117602 156 ntBASIC2.14□□□□□ -2.07
Col5a1O88207 Gm2003-201ENSMUST00000118537 636 ntBASIC2.14□□□□□ -2.07
Col5a1O88207 Gm11835-201ENSMUST00000120635 663 ntBASIC2.14□□□□□ -2.07
Col5a1O88207 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC2.14□□□□□ -2.07
Col5a1O88207 Gm1989-201ENSMUST00000126244 636 ntBASIC2.14□□□□□ -2.07
Col5a1O88207 Olfr1242-203ENSMUST00000143935 2406 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Col5a1O88207 Gm25460-201ENSMUST00000157954 127 ntBASIC2.14□□□□□ -2.07
Col5a1O88207 Ighv1-78-201ENSMUST00000163670 294 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Col5a1O88207 Gm24754-201ENSMUST00000177997 107 ntBASIC2.14□□□□□ -2.07
Col5a1O88207 Gm27755-201ENSMUST00000184623 132 ntBASIC2.14□□□□□ -2.07
Col5a1O88207 Gm37578-201ENSMUST00000192256 1177 ntBASIC2.14□□□□□ -2.07
Col5a1O88207 Gm6615-201ENSMUST00000199426 631 ntBASIC2.14□□□□□ -2.07
Col5a1O88207 Gm5317-201ENSMUST00000204445 847 ntBASIC2.14□□□□□ -2.07
Col5a1O88207 Gm18598-201ENSMUST00000207724 597 ntBASIC2.14□□□□□ -2.07
Col5a1O88207 AL929285.1-201ENSMUST00000215522 229 ntBASIC2.14□□□□□ -2.07
Col5a1O88207 AC160016.1-201ENSMUST00000215589 448 ntBASIC2.14□□□□□ -2.07
Col5a1O88207 Olfr360-202ENSMUST00000216706 1816 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Col5a1O88207 Gm18557-201ENSMUST00000218710 433 ntBASIC2.14□□□□□ -2.07
Col5a1O88207 4930567K20Rik-203ENSMUST00000220108 646 ntTSL 5 BASIC2.14□□□□□ -2.07
Col5a1O88207 AC102352.1-201ENSMUST00000224187 582 ntBASIC2.14□□□□□ -2.07
Col5a1O88207 Olfr1102-201ENSMUST00000055129 1063 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Col5a1O88207 Olfr867-201ENSMUST00000060780 996 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Col5a1O88207 Olfr802-201ENSMUST00000074713 939 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Col5a1O88207 Gm22304-201ENSMUST00000082688 129 ntBASIC2.14□□□□□ -2.07
Col5a1O88207 Gm37387-201ENSMUST00000192201 1806 ntBASIC2.13□□□□□ -2.07
Col5a1O88207 Gm45130-201ENSMUST00000207574 3388 ntBASIC2.13□□□□□ -2.07
Col5a1O88207 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC2.13□□□□□ -2.07
Col5a1O88207 Gm44288-201ENSMUST00000205061 2795 ntBASIC2.13□□□□□ -2.07
Col5a1O88207 Skint9-201ENSMUST00000058605 1372 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
Col5a1O88207 Gm7869-201ENSMUST00000121457 1322 ntBASIC2.13□□□□□ -2.07
Col5a1O88207 Med21-203ENSMUST00000111650 572 ntTSL 2 BASIC2.13□□□□□ -2.07
Col5a1O88207 Gm13359-201ENSMUST00000119000 695 ntBASIC2.13□□□□□ -2.07
Col5a1O88207 Gm14898-201ENSMUST00000120202 645 ntBASIC2.13□□□□□ -2.07
Col5a1O88207 Sval2-201ENSMUST00000014248 585 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
Col5a1O88207 Krtap27-1-201ENSMUST00000165580 646 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
Col5a1O88207 Samd15-201ENSMUST00000169669 1194 ntBASIC2.13□□□□□ -2.07
Col5a1O88207 Vmn2r-ps73-201ENSMUST00000173890 1194 ntBASIC2.13□□□□□ -2.07
Col5a1O88207 Gm18397-201ENSMUST00000176704 587 ntBASIC2.13□□□□□ -2.07
Col5a1O88207 Vmn1r-ps49-201ENSMUST00000177009 879 ntBASIC2.13□□□□□ -2.07
Col5a1O88207 Gm25598-201ENSMUST00000179031 107 ntBASIC2.13□□□□□ -2.07
Col5a1O88207 Gm20594-201ENSMUST00000179797 449 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
Col5a1O88207 Gm29657-201ENSMUST00000189807 342 ntBASIC2.13□□□□□ -2.07
Col5a1O88207 Gm36997-201ENSMUST00000195090 707 ntBASIC2.13□□□□□ -2.07
Col5a1O88207 Csn1s2a-203ENSMUST00000196749 917 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
Col5a1O88207 Gm44300-201ENSMUST00000196792 121 ntBASIC2.13□□□□□ -2.07
Col5a1O88207 AL928567.1-201ENSMUST00000197891 138 ntBASIC2.13□□□□□ -2.07
Col5a1O88207 Gm30275-202ENSMUST00000198124 416 ntTSL 3 BASIC2.13□□□□□ -2.07
Col5a1O88207 Gm43440-201ENSMUST00000201957 729 ntBASIC2.13□□□□□ -2.07
Col5a1O88207 Gm18855-201ENSMUST00000206689 570 ntBASIC2.13□□□□□ -2.07
Col5a1O88207 Gm17987-201ENSMUST00000206902 603 ntBASIC2.13□□□□□ -2.07
Col5a1O88207 Gm18268-201ENSMUST00000208445 943 ntBASIC2.13□□□□□ -2.07
Col5a1O88207 Gm36485-201ENSMUST00000214286 464 ntTSL 3 BASIC2.13□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 88.2 ms