Protein–RNA interactions for Protein: O55028

Bckdk, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, mousemouse

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BckdkO55028 Gm16053-201ENSMUST00000120511 188 ntBASIC2.55□□□□□ -2
BckdkO55028 Vmn1r-ps106-201ENSMUST00000120587 824 ntBASIC2.55□□□□□ -2
BckdkO55028 Gm14979-201ENSMUST00000121561 1035 ntBASIC2.55□□□□□ -2
BckdkO55028 Gm23463-201ENSMUST00000122468 99 ntBASIC2.55□□□□□ -2
BckdkO55028 Gm15969-201ENSMUST00000151967 236 ntTSL 3 BASIC2.55□□□□□ -2
BckdkO55028 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
BckdkO55028 Gm28650-201ENSMUST00000188413 411 ntBASIC2.55□□□□□ -2
BckdkO55028 Gm29460-201ENSMUST00000188607 714 ntBASIC2.55□□□□□ -2
BckdkO55028 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
BckdkO55028 C030015E24Rik-201ENSMUST00000198148 828 ntBASIC2.55□□□□□ -2
BckdkO55028 Gm42524-201ENSMUST00000202881 2214 ntTSL 1 (best) BASIC2.55□□□□□ -2
BckdkO55028 Gm44061-201ENSMUST00000203962 1195 ntBASIC2.55□□□□□ -2
BckdkO55028 Olfr785-201ENSMUST00000204402 2014 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
BckdkO55028 Gm17838-201ENSMUST00000205872 876 ntBASIC2.55□□□□□ -2
BckdkO55028 Gm44808-201ENSMUST00000208887 264 ntTSL 5 BASIC2.55□□□□□ -2
BckdkO55028 Gm20948-201ENSMUST00000211091 449 ntBASIC2.55□□□□□ -2
BckdkO55028 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
BckdkO55028 AC138027.1-201ENSMUST00000218324 472 ntTSL 5 BASIC2.55□□□□□ -2
BckdkO55028 AC166113.1-201ENSMUST00000225258 475 ntBASIC2.55□□□□□ -2
BckdkO55028 Gngt1-201ENSMUST00000031673 1183 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
BckdkO55028 Scgb1b2-201ENSMUST00000080635 424 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
BckdkO55028 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC2.55□□□□□ -2
BckdkO55028 Gm37236-201ENSMUST00000193670 3249 ntBASIC2.55□□□□□ -2
BckdkO55028 Vmn2r-ps69-201ENSMUST00000173382 2565 ntBASIC2.55□□□□□ -2
BckdkO55028 Vmn2r50-201ENSMUST00000074943 2586 ntAPPRIS P2 TSL 5 BASIC2.55□□□□□ -2
BckdkO55028 Gm9496-201ENSMUST00000191295 1601 ntBASIC2.54□□□□□ -2
BckdkO55028 Cpxcr1-201ENSMUST00000101269 1596 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
BckdkO55028 Gm19965-201ENSMUST00000179777 3030 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
BckdkO55028 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
BckdkO55028 Olfr1135-202ENSMUST00000213835 2648 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
BckdkO55028 Vmn2r74-201ENSMUST00000166355 2562 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
BckdkO55028 Mir344c-201ENSMUST00000103919 92 ntBASIC2.54□□□□□ -2
BckdkO55028 Gm24068-201ENSMUST00000104513 132 ntBASIC2.54□□□□□ -2
BckdkO55028 Mir1195-201ENSMUST00000116818 98 ntBASIC2.54□□□□□ -2
BckdkO55028 Gm14197-201ENSMUST00000117480 1049 ntBASIC2.54□□□□□ -2
BckdkO55028 Gm14897-201ENSMUST00000118213 207 ntBASIC2.54□□□□□ -2
BckdkO55028 Gm14469-201ENSMUST00000118363 202 ntBASIC2.54□□□□□ -2
BckdkO55028 Gm7429-201ENSMUST00000118664 348 ntBASIC2.54□□□□□ -2
BckdkO55028 Vmn1r-ps109-201ENSMUST00000119308 725 ntBASIC2.54□□□□□ -2
BckdkO55028 Gm7327-201ENSMUST00000120925 652 ntBASIC2.54□□□□□ -2
BckdkO55028 n-R5s192-201ENSMUST00000122577 119 ntBASIC2.54□□□□□ -2
BckdkO55028 Gm25270-201ENSMUST00000122606 138 ntBASIC2.54□□□□□ -2
BckdkO55028 Gm16533-201ENSMUST00000140035 228 ntBASIC2.54□□□□□ -2
BckdkO55028 Gm22839-201ENSMUST00000158436 304 ntBASIC2.54□□□□□ -2
BckdkO55028 Gm16236-201ENSMUST00000159588 379 ntBASIC2.54□□□□□ -2
BckdkO55028 Prl3d2-202ENSMUST00000164964 675 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
BckdkO55028 Snord53-201ENSMUST00000175146 78 ntBASIC2.54□□□□□ -2
BckdkO55028 Gm20619-204ENSMUST00000181343 786 ntTSL 5 BASIC2.54□□□□□ -2
BckdkO55028 Gm27599-201ENSMUST00000183758 174 ntBASIC2.54□□□□□ -2
BckdkO55028 Gm19257-201ENSMUST00000186121 183 ntBASIC2.54□□□□□ -2
BckdkO55028 Gm37866-201ENSMUST00000191950 696 ntBASIC2.54□□□□□ -2
BckdkO55028 Gm30341-201ENSMUST00000194363 289 ntBASIC2.54□□□□□ -2
BckdkO55028 Gm18551-201ENSMUST00000195594 642 ntBASIC2.54□□□□□ -2
BckdkO55028 4930584F24Rik-203ENSMUST00000197091 954 ntTSL 1 (best) BASIC2.54□□□□□ -2
BckdkO55028 Mir9-1-201ENSMUST00000199907 89 ntBASIC2.54□□□□□ -2
BckdkO55028 Gm44332-201ENSMUST00000203712 433 ntBASIC2.54□□□□□ -2
BckdkO55028 Gm7675-201ENSMUST00000208828 686 ntBASIC2.54□□□□□ -2
BckdkO55028 Gm44688-201ENSMUST00000209083 537 ntBASIC2.54□□□□□ -2
BckdkO55028 Gm45344-201ENSMUST00000211610 341 ntBASIC2.54□□□□□ -2
BckdkO55028 4930401A07Rik-201ENSMUST00000214657 746 ntTSL 1 (best) BASIC2.54□□□□□ -2
BckdkO55028 CT030135.1-201ENSMUST00000223760 570 ntBASIC2.54□□□□□ -2
BckdkO55028 AC125223.1-203ENSMUST00000225304 498 ntBASIC2.54□□□□□ -2
BckdkO55028 Olfr348-201ENSMUST00000056865 942 ntAPPRIS P1 BASIC2.54□□□□□ -2
BckdkO55028 Gm25856-201ENSMUST00000082786 75 ntBASIC2.54□□□□□ -2
BckdkO55028 Gm38382-201ENSMUST00000193790 2499 ntBASIC2.54□□□□□ -2
BckdkO55028 Olfr1370-204ENSMUST00000215806 4322 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
BckdkO55028 Gm43718-201ENSMUST00000197524 1857 ntBASIC2.54□□□□□ -2
BckdkO55028 AC115047.2-201ENSMUST00000214421 1848 ntBASIC2.54□□□□□ -2
BckdkO55028 Gm44230-201ENSMUST00000203032 3550 ntBASIC2.54□□□□□ -2
BckdkO55028 Gm42770-201ENSMUST00000199657 4155 ntBASIC2.53□□□□□ -2
BckdkO55028 Mir878-201ENSMUST00000104680 78 ntBASIC2.53□□□□□ -2
BckdkO55028 Gm14459-201ENSMUST00000115573 540 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
BckdkO55028 Gm7974-201ENSMUST00000117154 408 ntBASIC2.53□□□□□ -2
BckdkO55028 Gm14566-201ENSMUST00000118915 321 ntBASIC2.53□□□□□ -2
BckdkO55028 Gm5937-201ENSMUST00000119715 643 ntBASIC2.53□□□□□ -2
BckdkO55028 Gm12640-201ENSMUST00000120097 310 ntBASIC2.53□□□□□ -2
BckdkO55028 Gm14821-201ENSMUST00000121975 435 ntBASIC2.53□□□□□ -2
BckdkO55028 Gm11819-201ENSMUST00000122192 372 ntBASIC2.53□□□□□ -2
BckdkO55028 Gm16351-201ENSMUST00000142008 250 ntTSL 3 BASIC2.53□□□□□ -2
BckdkO55028 Gm12801-201ENSMUST00000153228 263 ntTSL 3 BASIC2.53□□□□□ -2
BckdkO55028 Gm24879-201ENSMUST00000158386 143 ntBASIC2.53□□□□□ -2
BckdkO55028 Gm23473-201ENSMUST00000158883 116 ntBASIC2.53□□□□□ -2
BckdkO55028 Gm17166-201ENSMUST00000172006 431 ntBASIC2.53□□□□□ -2
BckdkO55028 Gm8649-201ENSMUST00000181799 233 ntBASIC2.53□□□□□ -2
BckdkO55028 Gm29658-201ENSMUST00000185404 230 ntBASIC2.53□□□□□ -2
BckdkO55028 Gm29597-201ENSMUST00000188035 308 ntBASIC2.53□□□□□ -2
BckdkO55028 Gm37768-201ENSMUST00000192748 887 ntTSL 3 BASIC2.53□□□□□ -2
BckdkO55028 Gm37616-201ENSMUST00000193974 322 ntBASIC2.53□□□□□ -2
BckdkO55028 Gm44526-201ENSMUST00000204664 121 ntBASIC2.53□□□□□ -2
BckdkO55028 Gm33501-202ENSMUST00000209983 706 ntTSL 5 BASIC2.53□□□□□ -2
BckdkO55028 Gm45614-201ENSMUST00000209994 721 ntBASIC2.53□□□□□ -2
BckdkO55028 CT030184.1-201ENSMUST00000222393 416 ntBASIC2.53□□□□□ -2
BckdkO55028 AC154527.5-201ENSMUST00000224448 496 ntBASIC2.53□□□□□ -2
BckdkO55028 AC158395.1-201ENSMUST00000227206 452 ntBASIC2.53□□□□□ -2
BckdkO55028 Tas2r117-201ENSMUST00000068302 1158 ntAPPRIS P1 BASIC2.53□□□□□ -2
BckdkO55028 Gm6030-201ENSMUST00000078768 402 ntBASIC2.53□□□□□ -2
BckdkO55028 Gm22575-201ENSMUST00000082981 110 ntBASIC2.53□□□□□ -2
BckdkO55028 Olfr895-201ENSMUST00000093864 951 ntBASIC2.53□□□□□ -2
BckdkO55028 Olfr1141-201ENSMUST00000099846 936 ntAPPRIS P1 BASIC2.53□□□□□ -2
BckdkO55028 Olfr103-202ENSMUST00000173472 3079 ntAPPRIS P1 TSL 3 BASIC2.53□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 96.2 ms