Protein–RNA interactions for Protein: O55017

Cacna1b, Voltage-dependent N-type calcium channel subunit alpha-1B, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1bO55017 Obox1-206ENSMUST00000181001 1217 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Cacna1bO55017 Gm7909-201ENSMUST00000182688 614 ntBASIC1.82□□□□□ -2.12
Cacna1bO55017 Mir8103-201ENSMUST00000183945 107 ntBASIC1.82□□□□□ -2.12
Cacna1bO55017 Mir7059-201ENSMUST00000184825 59 ntBASIC1.82□□□□□ -2.12
Cacna1bO55017 AC154851.2-201ENSMUST00000222172 644 ntBASIC1.82□□□□□ -2.12
Cacna1bO55017 Olfr775-201ENSMUST00000097163 939 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
Cacna1bO55017 Gm44897-201ENSMUST00000206187 1341 ntBASIC1.82□□□□□ -2.12
Cacna1bO55017 Vmn2r-ps94-201ENSMUST00000116665 1456 ntBASIC1.82□□□□□ -2.12
Cacna1bO55017 Olfr679-204ENSMUST00000215704 5018 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Cacna1bO55017 Olfr1242-202ENSMUST00000111540 2189 ntAPPRIS P1 TSL 3 BASIC1.82□□□□□ -2.12
Cacna1bO55017 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
Cacna1bO55017 Ssxb8-201ENSMUST00000101690 518 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Cacna1bO55017 Gm23708-201ENSMUST00000104367 123 ntBASIC1.82□□□□□ -2.12
Cacna1bO55017 Gm14786-201ENSMUST00000117127 944 ntBASIC1.82□□□□□ -2.12
Cacna1bO55017 Gm14215-201ENSMUST00000120578 221 ntBASIC1.82□□□□□ -2.12
Cacna1bO55017 Gm6486-201ENSMUST00000166202 434 ntBASIC1.82□□□□□ -2.12
Cacna1bO55017 Gm17153-201ENSMUST00000171314 490 ntBASIC1.82□□□□□ -2.12
Cacna1bO55017 Mup-ps9-201ENSMUST00000178847 545 ntBASIC1.82□□□□□ -2.12
Cacna1bO55017 Trbv18-201ENSMUST00000194256 294 ntBASIC1.82□□□□□ -2.12
Cacna1bO55017 Gm43967-201ENSMUST00000203787 301 ntBASIC1.82□□□□□ -2.12
Cacna1bO55017 Gm3690-201ENSMUST00000211341 262 ntBASIC1.82□□□□□ -2.12
Cacna1bO55017 Nat1-202ENSMUST00000212171 1208 ntAPPRIS ALT1 TSL 5 BASIC1.82□□□□□ -2.12
Cacna1bO55017 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
Cacna1bO55017 Snord71-201ENSMUST00000104361 85 ntBASIC1.81□□□□□ -2.12
Cacna1bO55017 Gm9785-202ENSMUST00000144563 593 ntBASIC1.81□□□□□ -2.12
Cacna1bO55017 Snora81-201ENSMUST00000157310 178 ntBASIC1.81□□□□□ -2.12
Cacna1bO55017 Gm8292-201ENSMUST00000162574 396 ntBASIC1.81□□□□□ -2.12
Cacna1bO55017 1700006P03Rik-201ENSMUST00000191810 409 ntBASIC1.81□□□□□ -2.12
Cacna1bO55017 Gm45830-201ENSMUST00000212945 344 ntTSL 5 BASIC1.81□□□□□ -2.12
Cacna1bO55017 E330017A01Rik-201ENSMUST00000053249 1108 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
Cacna1bO55017 Olfr340-201ENSMUST00000072854 939 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
Cacna1bO55017 Gm10794-201ENSMUST00000099624 207 ntBASIC1.81□□□□□ -2.12
Cacna1bO55017 Olfr172-202ENSMUST00000214139 1778 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
Cacna1bO55017 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC1.8□□□□□ -2.12
Cacna1bO55017 Mir147-201ENSMUST00000102354 79 ntBASIC1.8□□□□□ -2.12
Cacna1bO55017 Sval2-201ENSMUST00000014248 585 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
Cacna1bO55017 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.8□□□□□ -2.12
Cacna1bO55017 Gm16326-201ENSMUST00000162843 414 ntBASIC1.8□□□□□ -2.12
Cacna1bO55017 Vmn1r14-201ENSMUST00000177435 912 ntAPPRIS P2 BASIC1.8□□□□□ -2.12
Cacna1bO55017 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
Cacna1bO55017 Gm26652-202ENSMUST00000181672 475 ntBASIC1.8□□□□□ -2.12
Cacna1bO55017 Gm27952-201ENSMUST00000184748 105 ntBASIC1.8□□□□□ -2.12
Cacna1bO55017 Traj59-202ENSMUST00000197589 62 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
Cacna1bO55017 AC129202.2-201ENSMUST00000225123 177 ntBASIC1.8□□□□□ -2.12
Cacna1bO55017 CT030662.3-201ENSMUST00000228751 476 ntBASIC1.8□□□□□ -2.12
Cacna1bO55017 Gm25124-201ENSMUST00000083345 164 ntBASIC1.8□□□□□ -2.12
Cacna1bO55017 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
Cacna1bO55017 Gm26280-201ENSMUST00000157096 101 ntBASIC1.8□□□□□ -2.12
Cacna1bO55017 Gm2389-201ENSMUST00000160487 189 ntBASIC1.8□□□□□ -2.12
Cacna1bO55017 Gm21139-201ENSMUST00000186594 877 ntBASIC1.8□□□□□ -2.12
Cacna1bO55017 Gm21742-201ENSMUST00000189352 548 ntBASIC1.8□□□□□ -2.12
Cacna1bO55017 Gm43582-201ENSMUST00000196149 343 ntBASIC1.8□□□□□ -2.12
Cacna1bO55017 Olfr840-ps1-201ENSMUST00000211827 917 ntBASIC1.8□□□□□ -2.12
Cacna1bO55017 Gm34983-201ENSMUST00000219484 396 ntTSL 3 BASIC1.8□□□□□ -2.12
Cacna1bO55017 AC239878.1-201ENSMUST00000224212 506 ntBASIC1.8□□□□□ -2.12
Cacna1bO55017 Olfr509-201ENSMUST00000061690 1075 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
Cacna1bO55017 Gm24319-201ENSMUST00000083389 107 ntBASIC1.8□□□□□ -2.12
Cacna1bO55017 Mir344-201ENSMUST00000083634 95 ntBASIC1.8□□□□□ -2.12
Cacna1bO55017 Olfr1437-202ENSMUST00000207241 3751 ntAPPRIS P1 TSL 2 BASIC1.8□□□□□ -2.12
Cacna1bO55017 Olfr794-202ENSMUST00000204820 3044 ntAPPRIS P1 TSL 2 BASIC1.79□□□□□ -2.12
Cacna1bO55017 Olfr1318-202ENSMUST00000214063 3556 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
Cacna1bO55017 Gm11268-201ENSMUST00000118347 267 ntBASIC1.79□□□□□ -2.12
Cacna1bO55017 Gm22225-201ENSMUST00000157358 278 ntBASIC1.79□□□□□ -2.12
Cacna1bO55017 Gm26355-201ENSMUST00000158220 105 ntBASIC1.79□□□□□ -2.12
Cacna1bO55017 Gm22519-201ENSMUST00000158270 178 ntBASIC1.79□□□□□ -2.12
Cacna1bO55017 Gm26171-201ENSMUST00000158422 131 ntBASIC1.79□□□□□ -2.12
Cacna1bO55017 Gm9022-202ENSMUST00000183285 483 ntBASIC1.79□□□□□ -2.12
Cacna1bO55017 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
Cacna1bO55017 Gm42625-201ENSMUST00000198611 922 ntBASIC1.79□□□□□ -2.12
Cacna1bO55017 Tgif1-ps-201ENSMUST00000201864 736 ntBASIC1.79□□□□□ -2.12
Cacna1bO55017 Gm44877-201ENSMUST00000206485 274 ntTSL 5 BASIC1.79□□□□□ -2.12
Cacna1bO55017 Gm39388-201ENSMUST00000214502 1041 ntTSL 5 BASIC1.79□□□□□ -2.12
Cacna1bO55017 AC165415.1-201ENSMUST00000228924 273 ntBASIC1.79□□□□□ -2.12
Cacna1bO55017 Gm27013-202ENSMUST00000205067 1436 ntBASIC1.79□□□□□ -2.12
Cacna1bO55017 n-R5s52-201ENSMUST00000104614 113 ntBASIC1.79□□□□□ -2.12
Cacna1bO55017 Gm12509-201ENSMUST00000118033 609 ntBASIC1.79□□□□□ -2.12
Cacna1bO55017 Gm8080-201ENSMUST00000122046 1155 ntBASIC1.79□□□□□ -2.12
Cacna1bO55017 Gm13366-201ENSMUST00000122198 970 ntBASIC1.79□□□□□ -2.12
Cacna1bO55017 Gm23585-201ENSMUST00000157656 102 ntBASIC1.79□□□□□ -2.12
Cacna1bO55017 Gm23642-201ENSMUST00000157858 258 ntBASIC1.79□□□□□ -2.12
Cacna1bO55017 Gm25976-201ENSMUST00000158695 130 ntBASIC1.79□□□□□ -2.12
Cacna1bO55017 Vmn1r-ps143-201ENSMUST00000176730 604 ntBASIC1.79□□□□□ -2.12
Cacna1bO55017 Mir6353-201ENSMUST00000183596 113 ntBASIC1.79□□□□□ -2.12
Cacna1bO55017 Gm27864-201ENSMUST00000183704 190 ntBASIC1.79□□□□□ -2.12
Cacna1bO55017 Gm29137-201ENSMUST00000190301 520 ntTSL 5 BASIC1.79□□□□□ -2.12
Cacna1bO55017 AC154562.1-201ENSMUST00000226140 966 ntBASIC1.79□□□□□ -2.12
Cacna1bO55017 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.79□□□□□ -2.12
Cacna1bO55017 AC152951.2-201ENSMUST00000218293 3587 ntBASIC1.79□□□□□ -2.12
Cacna1bO55017 Gm43896-201ENSMUST00000203440 2032 ntBASIC1.79□□□□□ -2.12
Cacna1bO55017 Olfr821-202ENSMUST00000205181 1993 ntAPPRIS P1 TSL 2 BASIC1.78□□□□□ -2.12
Cacna1bO55017 Olfr792-202ENSMUST00000215436 2113 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
Cacna1bO55017 Tslrn1-201ENSMUST00000129479 747 ntTSL 3 BASIC1.78□□□□□ -2.12
Cacna1bO55017 Gm16510-201ENSMUST00000153501 249 ntBASIC1.78□□□□□ -2.12
Cacna1bO55017 Gm23116-201ENSMUST00000158481 67 ntBASIC1.78□□□□□ -2.12
Cacna1bO55017 Gm25996-201ENSMUST00000175393 117 ntBASIC1.78□□□□□ -2.12
Cacna1bO55017 Sult2a6-202ENSMUST00000184731 664 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
Cacna1bO55017 1700057G04Rik-206ENSMUST00000185580 842 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
Cacna1bO55017 Gm36997-201ENSMUST00000195090 707 ntBASIC1.78□□□□□ -2.12
Cacna1bO55017 Gm38018-201ENSMUST00000195651 540 ntBASIC1.78□□□□□ -2.12
Cacna1bO55017 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 88 ms