Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Gm23084-201ENSMUST00000157850 114 ntBASIC3.55□□□□□ -1.84
Npc1O35604 Gm14596-201ENSMUST00000180268 537 ntBASIC3.55□□□□□ -1.84
Npc1O35604 Gm14595-201ENSMUST00000180335 537 ntBASIC3.55□□□□□ -1.84
Npc1O35604 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC3.55□□□□□ -1.84
Npc1O35604 Gm6651-201ENSMUST00000189471 271 ntBASIC3.55□□□□□ -1.84
Npc1O35604 Gm19498-201ENSMUST00000191128 331 ntBASIC3.55□□□□□ -1.84
Npc1O35604 Gm18403-201ENSMUST00000192907 529 ntBASIC3.55□□□□□ -1.84
Npc1O35604 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
Npc1O35604 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
Npc1O35604 Gm43994-201ENSMUST00000203809 227 ntTSL 5 BASIC3.55□□□□□ -1.84
Npc1O35604 Gm45020-201ENSMUST00000205356 381 ntTSL 3 BASIC3.55□□□□□ -1.84
Npc1O35604 Gm45245-201ENSMUST00000210082 376 ntBASIC3.55□□□□□ -1.84
Npc1O35604 AC153361.2-201ENSMUST00000218188 481 ntTSL 5 BASIC3.55□□□□□ -1.84
Npc1O35604 AC157494.1-201ENSMUST00000221127 549 ntTSL 5 BASIC3.55□□□□□ -1.84
Npc1O35604 Gm35558-203ENSMUST00000222264 204 ntBASIC3.55□□□□□ -1.84
Npc1O35604 AC154603.1-201ENSMUST00000224355 313 ntBASIC3.55□□□□□ -1.84
Npc1O35604 AC131029.2-202ENSMUST00000228430 496 ntBASIC3.55□□□□□ -1.84
Npc1O35604 Ly6a-201ENSMUST00000023248 819 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Npc1O35604 Olfr747-201ENSMUST00000078075 955 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Npc1O35604 Rps17-201ENSMUST00000080813 494 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Npc1O35604 Mir26a-1-201ENSMUST00000083579 90 ntBASIC3.55□□□□□ -1.84
Npc1O35604 Smr2-201ENSMUST00000087043 676 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
Npc1O35604 Olfr577-203ENSMUST00000215237 3144 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Npc1O35604 Zfp131-202ENSMUST00000178271 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
Npc1O35604 Cd46-203ENSMUST00000162650 6288 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Npc1O35604 Olfr146-203ENSMUST00000214410 1651 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Npc1O35604 Gm37320-201ENSMUST00000192781 4953 ntBASIC3.55□□□□□ -1.84
Npc1O35604 Gm3095-201ENSMUST00000164696 1568 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Npc1O35604 AC163660.3-201ENSMUST00000224253 1563 ntBASIC3.55□□□□□ -1.84
Npc1O35604 Sult2a8-203ENSMUST00000168252 2097 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Npc1O35604 Csnka2ip-202ENSMUST00000209382 2859 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
Npc1O35604 AC159193.2-201ENSMUST00000220865 4251 ntBASIC3.54□□□□□ -1.84
Npc1O35604 Olfr644-203ENSMUST00000213991 3506 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Npc1O35604 Defa-ps9-201ENSMUST00000118264 276 ntBASIC3.54□□□□□ -1.84
Npc1O35604 Gm1993-201ENSMUST00000120268 1131 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Npc1O35604 Gm5958-201ENSMUST00000147698 297 ntBASIC3.54□□□□□ -1.84
Npc1O35604 Gm24061-201ENSMUST00000157489 120 ntBASIC3.54□□□□□ -1.84
Npc1O35604 Gm25369-201ENSMUST00000158848 132 ntBASIC3.54□□□□□ -1.84
Npc1O35604 Nron-204ENSMUST00000158971 370 ntBASIC3.54□□□□□ -1.84
Npc1O35604 Spin2g-201ENSMUST00000178425 687 ntBASIC3.54□□□□□ -1.84
Npc1O35604 Gm24100-201ENSMUST00000178592 79 ntBASIC3.54□□□□□ -1.84
Npc1O35604 Gm24137-201ENSMUST00000180055 79 ntBASIC3.54□□□□□ -1.84
Npc1O35604 Gm22391-201ENSMUST00000180356 79 ntBASIC3.54□□□□□ -1.84
Npc1O35604 Gm8151-201ENSMUST00000184817 871 ntBASIC3.54□□□□□ -1.84
Npc1O35604 Gm21858-202ENSMUST00000185713 923 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Npc1O35604 Gm29380-201ENSMUST00000185898 416 ntTSL 5 BASIC3.54□□□□□ -1.84
Npc1O35604 Gm21409-201ENSMUST00000186110 923 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Npc1O35604 Gm28961-201ENSMUST00000190573 923 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Npc1O35604 Gm5829-201ENSMUST00000191383 351 ntBASIC3.54□□□□□ -1.84
Npc1O35604 Gm18956-201ENSMUST00000192857 480 ntBASIC3.54□□□□□ -1.84
Npc1O35604 Gm13266-203ENSMUST00000193364 421 ntTSL 3 BASIC3.54□□□□□ -1.84
Npc1O35604 Gm37617-201ENSMUST00000194309 159 ntBASIC3.54□□□□□ -1.84
Npc1O35604 Igkv14-118-2-201ENSMUST00000198287 339 ntBASIC3.54□□□□□ -1.84
Npc1O35604 Gm43431-201ENSMUST00000198577 340 ntBASIC3.54□□□□□ -1.84
Npc1O35604 Igkv14-126-1-201ENSMUST00000199899 346 ntBASIC3.54□□□□□ -1.84
Npc1O35604 Olfr436-ps1-201ENSMUST00000203108 284 ntBASIC3.54□□□□□ -1.84
Npc1O35604 AC147628.1-201ENSMUST00000228193 688 ntBASIC3.54□□□□□ -1.84
Npc1O35604 Tas2r123-201ENSMUST00000071696 1002 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Npc1O35604 Etd-201ENSMUST00000074232 478 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
Npc1O35604 Rpl32-ps-201ENSMUST00000091052 506 ntBASIC3.54□□□□□ -1.84
Npc1O35604 Olfr873-205ENSMUST00000215540 3784 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
Npc1O35604 Mctp1-202ENSMUST00000109589 1653 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Npc1O35604 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC3.54□□□□□ -1.84
Npc1O35604 Olfr617-202ENSMUST00000215755 3000 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Npc1O35604 Gm45352-201ENSMUST00000210140 1452 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Npc1O35604 Cntn6-202ENSMUST00000161070 3515 ntTSL 5 BASIC3.53□□□□□ -1.84
Npc1O35604 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Npc1O35604 Mkln1-201ENSMUST00000026699 11395 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Npc1O35604 Rab27b-203ENSMUST00000121693 6891 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Npc1O35604 Ccdc73-201ENSMUST00000111114 3944 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Npc1O35604 Serpinb3a-202ENSMUST00000112717 1611 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Npc1O35604 Olfr679-202ENSMUST00000214328 5184 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Npc1O35604 Gm38207-201ENSMUST00000193009 3505 ntBASIC3.53□□□□□ -1.84
Npc1O35604 Mir450-2-201ENSMUST00000102444 69 ntBASIC3.53□□□□□ -1.84
Npc1O35604 Rps24-201ENSMUST00000112384 468 ntAPPRIS ALT1 TSL 5 BASIC3.53□□□□□ -1.84
Npc1O35604 Rps24-ps3-201ENSMUST00000118723 402 ntBASIC3.53□□□□□ -1.84
Npc1O35604 Gm11842-201ENSMUST00000130117 556 ntTSL 5 BASIC3.53□□□□□ -1.84
Npc1O35604 1700036O09Rik-201ENSMUST00000136834 349 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Npc1O35604 Gm22755-201ENSMUST00000157143 100 ntBASIC3.53□□□□□ -1.84
Npc1O35604 Gm22563-201ENSMUST00000157333 269 ntBASIC3.53□□□□□ -1.84
Npc1O35604 Gm22310-201ENSMUST00000157509 116 ntBASIC3.53□□□□□ -1.84
Npc1O35604 Gm20693-201ENSMUST00000177431 211 ntBASIC3.53□□□□□ -1.84
Npc1O35604 Gm29139-201ENSMUST00000185794 248 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Npc1O35604 Gm36934-201ENSMUST00000192007 306 ntBASIC3.53□□□□□ -1.84
Npc1O35604 Gm19089-201ENSMUST00000197207 613 ntBASIC3.53□□□□□ -1.84
Npc1O35604 Gm42818-201ENSMUST00000198869 987 ntBASIC3.53□□□□□ -1.84
Npc1O35604 Gm8041-201ENSMUST00000199755 616 ntBASIC3.53□□□□□ -1.84
Npc1O35604 Gm44016-201ENSMUST00000203463 164 ntBASIC3.53□□□□□ -1.84
Npc1O35604 Gm44609-201ENSMUST00000207157 460 ntBASIC3.53□□□□□ -1.84
Npc1O35604 AC154245.1-201ENSMUST00000224615 601 ntBASIC3.53□□□□□ -1.84
Npc1O35604 AC187103.4-202ENSMUST00000225091 230 ntBASIC3.53□□□□□ -1.84
Npc1O35604 AC101945.3-201ENSMUST00000226568 153 ntBASIC3.53□□□□□ -1.84
Npc1O35604 n-R5s220-201ENSMUST00000082926 120 ntBASIC3.53□□□□□ -1.84
Npc1O35604 Gm25755-201ENSMUST00000083396 107 ntBASIC3.53□□□□□ -1.84
Npc1O35604 Gm31592-201ENSMUST00000217529 3471 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Npc1O35604 Fancb-201ENSMUST00000057150 2422 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
Npc1O35604 Gm32014-201ENSMUST00000214779 5145 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Npc1O35604 Glra2-201ENSMUST00000058787 3150 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.85
Npc1O35604 Evi2b-201ENSMUST00000179322 1858 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Npc1O35604 Ifi203-ps-201ENSMUST00000155076 2556 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 82.6 ms