Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm7308-201ENSMUST00000121087 447 ntBASIC4.06□□□□□ -1.76
Pcdh1F7BJK1 Gm10059-201ENSMUST00000131139 171 ntBASIC4.06□□□□□ -1.76
Pcdh1F7BJK1 Gm13092-201ENSMUST00000136346 260 ntBASIC4.06□□□□□ -1.76
Pcdh1F7BJK1 Gm23960-201ENSMUST00000157206 131 ntBASIC4.06□□□□□ -1.76
Pcdh1F7BJK1 Gm16232-201ENSMUST00000162856 167 ntBASIC4.06□□□□□ -1.76
Pcdh1F7BJK1 Gm17072-201ENSMUST00000166673 658 ntBASIC4.06□□□□□ -1.76
Pcdh1F7BJK1 Stx5a-215ENSMUST00000176570 563 ntTSL 2 BASIC4.06□□□□□ -1.76
Pcdh1F7BJK1 Gm6214-201ENSMUST00000178845 541 ntBASIC4.06□□□□□ -1.76
Pcdh1F7BJK1 Gm27254-201ENSMUST00000183926 517 ntBASIC4.06□□□□□ -1.76
Pcdh1F7BJK1 Gm27521-201ENSMUST00000184022 64 ntBASIC4.06□□□□□ -1.76
Pcdh1F7BJK1 2610044O15Rik8-203ENSMUST00000188757 413 ntTSL 2 BASIC4.06□□□□□ -1.76
Pcdh1F7BJK1 Gm44157-201ENSMUST00000204720 410 ntBASIC4.06□□□□□ -1.76
Pcdh1F7BJK1 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC4.06□□□□□ -1.76
Pcdh1F7BJK1 Gm29154-234ENSMUST00000215272 750 ntTSL 5 BASIC4.06□□□□□ -1.76
Pcdh1F7BJK1 AC158606.1-201ENSMUST00000220078 325 ntBASIC4.06□□□□□ -1.76
Pcdh1F7BJK1 AC133598.4-202ENSMUST00000225267 469 ntBASIC4.06□□□□□ -1.76
Pcdh1F7BJK1 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Pcdh1F7BJK1 Gm4987-201ENSMUST00000078326 408 ntBASIC4.06□□□□□ -1.76
Pcdh1F7BJK1 Olfr1490-201ENSMUST00000080162 951 ntAPPRIS P2 BASIC4.06□□□□□ -1.76
Pcdh1F7BJK1 mt-Ti-201ENSMUST00000082393 69 ntBASIC4.06□□□□□ -1.76
Pcdh1F7BJK1 Vmn2r7-202ENSMUST00000161972 3583 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
Pcdh1F7BJK1 Vmn1r169-203ENSMUST00000227547 2322 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Pcdh1F7BJK1 Gm3972-201ENSMUST00000173960 2861 ntBASIC4.06□□□□□ -1.76
Pcdh1F7BJK1 AC156560.3-201ENSMUST00000222978 3841 ntBASIC4.06□□□□□ -1.76
Pcdh1F7BJK1 Vmn1r43-203ENSMUST00000226741 12542 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Pcdh1F7BJK1 4930528J11Rik-201ENSMUST00000201689 3611 ntBASIC4.06□□□□□ -1.76
Pcdh1F7BJK1 Cntn3-201ENSMUST00000032159 5183 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
Pcdh1F7BJK1 Chrdl1-201ENSMUST00000063029 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
Pcdh1F7BJK1 Lipo5-201ENSMUST00000156818 2003 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Pcdh1F7BJK1 Vmn1r77-203ENSMUST00000227320 8308 ntAPPRIS P2 BASIC4.05□□□□□ -1.76
Pcdh1F7BJK1 Gtf3c3-201ENSMUST00000041638 4582 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Pcdh1F7BJK1 Gm37742-201ENSMUST00000193263 3979 ntBASIC4.05□□□□□ -1.76
Pcdh1F7BJK1 Ncoa7-207ENSMUST00000215740 7043 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
Pcdh1F7BJK1 Gm44532-201ENSMUST00000207723 2598 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Pcdh1F7BJK1 Gm14296-202ENSMUST00000108931 750 ntBASIC4.05□□□□□ -1.76
Pcdh1F7BJK1 Gm15526-201ENSMUST00000112504 204 ntBASIC4.05□□□□□ -1.76
Pcdh1F7BJK1 Gm15058-201ENSMUST00000117689 458 ntBASIC4.05□□□□□ -1.76
Pcdh1F7BJK1 Gm14792-201ENSMUST00000119725 258 ntBASIC4.05□□□□□ -1.76
Pcdh1F7BJK1 Gm13396-201ENSMUST00000120617 271 ntBASIC4.05□□□□□ -1.76
Pcdh1F7BJK1 Gm14841-201ENSMUST00000121067 758 ntBASIC4.05□□□□□ -1.76
Pcdh1F7BJK1 Gm14500-201ENSMUST00000121647 113 ntBASIC4.05□□□□□ -1.76
Pcdh1F7BJK1 Gm25103-201ENSMUST00000122671 318 ntBASIC4.05□□□□□ -1.76
Pcdh1F7BJK1 Gm14298-201ENSMUST00000139032 237 ntBASIC4.05□□□□□ -1.76
Pcdh1F7BJK1 Gm16356-201ENSMUST00000143300 169 ntBASIC4.05□□□□□ -1.76
Pcdh1F7BJK1 Gm16365-204ENSMUST00000143877 779 ntTSL 2 BASIC4.05□□□□□ -1.76
Pcdh1F7BJK1 Gm11466-201ENSMUST00000148017 291 ntTSL 3 BASIC4.05□□□□□ -1.76
Pcdh1F7BJK1 Platr32-201ENSMUST00000148597 394 ntTSL 5 BASIC4.05□□□□□ -1.76
Pcdh1F7BJK1 Gm26149-201ENSMUST00000157432 108 ntBASIC4.05□□□□□ -1.76
Pcdh1F7BJK1 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC4.05□□□□□ -1.76
Pcdh1F7BJK1 Gm17162-201ENSMUST00000168538 473 ntBASIC4.05□□□□□ -1.76
Pcdh1F7BJK1 Lockd-204ENSMUST00000184991 243 ntTSL 5 BASIC4.05□□□□□ -1.76
Pcdh1F7BJK1 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC4.05□□□□□ -1.76
Pcdh1F7BJK1 Gm7871-201ENSMUST00000195346 618 ntBASIC4.05□□□□□ -1.76
Pcdh1F7BJK1 Gm42830-201ENSMUST00000196642 313 ntBASIC4.05□□□□□ -1.76
Pcdh1F7BJK1 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC4.05□□□□□ -1.76
Pcdh1F7BJK1 Gm43028-201ENSMUST00000202561 481 ntBASIC4.05□□□□□ -1.76
Pcdh1F7BJK1 Gm44941-201ENSMUST00000204216 627 ntTSL 2 BASIC4.05□□□□□ -1.76
Pcdh1F7BJK1 Gm44543-201ENSMUST00000209136 396 ntBASIC4.05□□□□□ -1.76
Pcdh1F7BJK1 AC166902.1-201ENSMUST00000216653 517 ntBASIC4.05□□□□□ -1.76
Pcdh1F7BJK1 Gm33680-201ENSMUST00000219336 576 ntTSL 5 BASIC4.05□□□□□ -1.76
Pcdh1F7BJK1 Selenok-ps6-201ENSMUST00000221812 283 ntBASIC4.05□□□□□ -1.76
Pcdh1F7BJK1 Olfr1002-201ENSMUST00000099920 957 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Pcdh1F7BJK1 Olfr811-202ENSMUST00000215058 2508 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Pcdh1F7BJK1 Gm26814-201ENSMUST00000181178 4149 ntBASIC4.05□□□□□ -1.76
Pcdh1F7BJK1 Olfr810-204ENSMUST00000217283 4527 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Pcdh1F7BJK1 Olfr870-202ENSMUST00000215984 4091 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Pcdh1F7BJK1 Olfr784-202ENSMUST00000214064 3119 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Pcdh1F7BJK1 Olfr597-202ENSMUST00000216456 2727 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Pcdh1F7BJK1 Atp1b4-201ENSMUST00000016471 4201 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Pcdh1F7BJK1 9330159F19Rik-202ENSMUST00000213489 2992 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Pcdh1F7BJK1 Ptgs2os-202ENSMUST00000181915 2937 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Pcdh1F7BJK1 Gm32444-201ENSMUST00000195147 3511 ntBASIC4.04□□□□□ -1.76
Pcdh1F7BJK1 1810006J02Rik-201ENSMUST00000186473 1687 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Pcdh1F7BJK1 Nlrp4b-202ENSMUST00000117413 3326 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Pcdh1F7BJK1 Eya4-208ENSMUST00000220299 3615 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Pcdh1F7BJK1 Igkv1-35-201ENSMUST00000103374 359 ntAPPRIS ALT2 BASIC4.04□□□□□ -1.76
Pcdh1F7BJK1 Traj31-201ENSMUST00000103710 57 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Pcdh1F7BJK1 Gm13876-201ENSMUST00000118451 261 ntBASIC4.04□□□□□ -1.76
Pcdh1F7BJK1 Gm14627-201ENSMUST00000118931 567 ntBASIC4.04□□□□□ -1.76
Pcdh1F7BJK1 Gm12771-201ENSMUST00000120246 135 ntBASIC4.04□□□□□ -1.76
Pcdh1F7BJK1 Gm12685-201ENSMUST00000121702 214 ntBASIC4.04□□□□□ -1.76
Pcdh1F7BJK1 Gm14618-201ENSMUST00000149377 740 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Pcdh1F7BJK1 Gm25383-201ENSMUST00000157810 144 ntBASIC4.04□□□□□ -1.76
Pcdh1F7BJK1 Gm24751-201ENSMUST00000157844 102 ntBASIC4.04□□□□□ -1.76
Pcdh1F7BJK1 Gm17472-201ENSMUST00000167638 352 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Pcdh1F7BJK1 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC4.04□□□□□ -1.76
Pcdh1F7BJK1 Gm27165-201ENSMUST00000183951 232 ntBASIC4.04□□□□□ -1.76
Pcdh1F7BJK1 Gm29414-201ENSMUST00000185379 448 ntTSL 3 BASIC4.04□□□□□ -1.76
Pcdh1F7BJK1 Gm28623-201ENSMUST00000187219 192 ntBASIC4.04□□□□□ -1.76
Pcdh1F7BJK1 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC4.04□□□□□ -1.76
Pcdh1F7BJK1 Gm29262-201ENSMUST00000190084 196 ntBASIC4.04□□□□□ -1.76
Pcdh1F7BJK1 Gm8242-202ENSMUST00000193056 475 ntBASIC4.04□□□□□ -1.76
Pcdh1F7BJK1 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC4.04□□□□□ -1.76
Pcdh1F7BJK1 Gm42570-201ENSMUST00000195937 292 ntBASIC4.04□□□□□ -1.76
Pcdh1F7BJK1 Gm43828-201ENSMUST00000196890 639 ntBASIC4.04□□□□□ -1.76
Pcdh1F7BJK1 Igkv15-102-201ENSMUST00000197885 287 ntBASIC4.04□□□□□ -1.76
Pcdh1F7BJK1 Gm19908-201ENSMUST00000204684 391 ntBASIC4.04□□□□□ -1.76
Pcdh1F7BJK1 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC4.04□□□□□ -1.76
Pcdh1F7BJK1 Gm45508-201ENSMUST00000209298 299 ntBASIC4.04□□□□□ -1.76
Pcdh1F7BJK1 AC122225.1-201ENSMUST00000215641 369 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 97 ms