Protein–RNA interactions for Protein: Q9ER60

Scn4a, Sodium channel protein type 4 subunit alpha, mousemouse

Predictions only

Length 1,841 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4aQ9ER60 Defa-ps6-201ENSMUST00000122172 282 ntBASIC3.35□□□□□ -1.87
Scn4aQ9ER60 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC3.35□□□□□ -1.87
Scn4aQ9ER60 Gm37543-201ENSMUST00000192443 1031 ntBASIC3.35□□□□□ -1.87
Scn4aQ9ER60 AC124399.1-201ENSMUST00000218334 590 ntBASIC3.35□□□□□ -1.87
Scn4aQ9ER60 AC153662.1-201ENSMUST00000222220 270 ntBASIC3.35□□□□□ -1.87
Scn4aQ9ER60 AC173481.1-201ENSMUST00000223351 270 ntBASIC3.35□□□□□ -1.87
Scn4aQ9ER60 Olfr1052-201ENSMUST00000054746 940 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Scn4aQ9ER60 mt-Nd2-201ENSMUST00000082396 1038 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Scn4aQ9ER60 Olfr812-203ENSMUST00000205013 1718 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Scn4aQ9ER60 Gm5653-201ENSMUST00000223393 1337 ntBASIC3.35□□□□□ -1.87
Scn4aQ9ER60 Gm15195-201ENSMUST00000118775 263 ntBASIC3.35□□□□□ -1.87
Scn4aQ9ER60 Gm14898-201ENSMUST00000120202 645 ntBASIC3.35□□□□□ -1.87
Scn4aQ9ER60 Gm24840-201ENSMUST00000122603 147 ntBASIC3.35□□□□□ -1.87
Scn4aQ9ER60 Gm3848-202ENSMUST00000151564 301 ntTSL 3 BASIC3.35□□□□□ -1.87
Scn4aQ9ER60 Gm25836-201ENSMUST00000158918 123 ntBASIC3.35□□□□□ -1.87
Scn4aQ9ER60 Gm16243-201ENSMUST00000160351 494 ntTSL 3 BASIC3.35□□□□□ -1.87
Scn4aQ9ER60 Gm17194-201ENSMUST00000164610 348 ntBASIC3.35□□□□□ -1.87
Scn4aQ9ER60 Gm21865-201ENSMUST00000177713 498 ntTSL 5 BASIC3.35□□□□□ -1.87
Scn4aQ9ER60 Gm26864-201ENSMUST00000181346 156 ntBASIC3.35□□□□□ -1.87
Scn4aQ9ER60 Mir1892-201ENSMUST00000197752 80 ntBASIC3.35□□□□□ -1.87
Scn4aQ9ER60 Gm42474-201ENSMUST00000201073 505 ntBASIC3.35□□□□□ -1.87
Scn4aQ9ER60 Gm18268-201ENSMUST00000208445 943 ntBASIC3.35□□□□□ -1.87
Scn4aQ9ER60 Ube2v2-201ENSMUST00000096234 609 ntTSL 3 BASIC3.35□□□□□ -1.87
Scn4aQ9ER60 Olfr1129-203ENSMUST00000214773 2403 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Scn4aQ9ER60 Vmn1r89-202ENSMUST00000226717 4120 ntAPPRIS P2 BASIC3.34□□□□□ -1.87
Scn4aQ9ER60 Gm32014-201ENSMUST00000214779 5145 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Scn4aQ9ER60 Gm6215-201ENSMUST00000119297 1386 ntBASIC3.34□□□□□ -1.87
Scn4aQ9ER60 Olfr1052-202ENSMUST00000215090 1526 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Scn4aQ9ER60 Mir92-1-201ENSMUST00000102108 80 ntBASIC3.34□□□□□ -1.87
Scn4aQ9ER60 Gm24273-201ENSMUST00000102332 164 ntBASIC3.34□□□□□ -1.87
Scn4aQ9ER60 Gm23063-201ENSMUST00000102350 93 ntBASIC3.34□□□□□ -1.87
Scn4aQ9ER60 Gm14905-201ENSMUST00000122351 639 ntBASIC3.34□□□□□ -1.87
Scn4aQ9ER60 Gm16147-201ENSMUST00000162143 373 ntBASIC3.34□□□□□ -1.87
Scn4aQ9ER60 Defa27-201ENSMUST00000167683 282 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Scn4aQ9ER60 Gm24969-201ENSMUST00000180331 79 ntBASIC3.34□□□□□ -1.87
Scn4aQ9ER60 Gm44703-201ENSMUST00000205724 248 ntBASIC3.34□□□□□ -1.87
Scn4aQ9ER60 AC139845.2-201ENSMUST00000227504 436 ntBASIC3.34□□□□□ -1.87
Scn4aQ9ER60 Olfr952-201ENSMUST00000073895 1056 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Scn4aQ9ER60 Sult3a1-201ENSMUST00000092597 1047 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Scn4aQ9ER60 Olfr617-202ENSMUST00000215755 3000 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Scn4aQ9ER60 Pak3-202ENSMUST00000112863 8657 ntAPPRIS ALT1 TSL 5 BASIC3.34□□□□□ -1.87
Scn4aQ9ER60 Olfr298-204ENSMUST00000217110 3549 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
Scn4aQ9ER60 Olfr109-204ENSMUST00000217602 5437 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
Scn4aQ9ER60 Zfy2-201ENSMUST00000115891 2816 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
Scn4aQ9ER60 Mir592-201ENSMUST00000102113 96 ntBASIC3.33□□□□□ -1.88
Scn4aQ9ER60 Gm22543-201ENSMUST00000104347 94 ntBASIC3.33□□□□□ -1.88
Scn4aQ9ER60 Gm14880-201ENSMUST00000117581 292 ntBASIC3.33□□□□□ -1.88
Scn4aQ9ER60 Gm12495-201ENSMUST00000119750 447 ntBASIC3.33□□□□□ -1.88
Scn4aQ9ER60 Gm13219-202ENSMUST00000152599 685 ntTSL 3 BASIC3.33□□□□□ -1.88
Scn4aQ9ER60 Gm24876-201ENSMUST00000158780 92 ntBASIC3.33□□□□□ -1.88
Scn4aQ9ER60 Gm20405-201ENSMUST00000174002 229 ntTSL 5 BASIC3.33□□□□□ -1.88
Scn4aQ9ER60 Gm28706-201ENSMUST00000186830 355 ntTSL 2 BASIC3.33□□□□□ -1.88
Scn4aQ9ER60 1700052H01Rik-202ENSMUST00000196973 429 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Scn4aQ9ER60 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC3.33□□□□□ -1.88
Scn4aQ9ER60 AC122924.2-201ENSMUST00000220799 298 ntBASIC3.33□□□□□ -1.88
Scn4aQ9ER60 9130015A21Rik-201ENSMUST00000221491 651 ntTSL 2 BASIC3.33□□□□□ -1.88
Scn4aQ9ER60 AC154224.1-201ENSMUST00000224367 403 ntBASIC3.33□□□□□ -1.88
Scn4aQ9ER60 AC133598.4-202ENSMUST00000225267 469 ntBASIC3.33□□□□□ -1.88
Scn4aQ9ER60 AC115735.3-201ENSMUST00000227757 513 ntBASIC3.33□□□□□ -1.88
Scn4aQ9ER60 Vmn1r25-202ENSMUST00000228585 909 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Scn4aQ9ER60 Defb7-201ENSMUST00000047851 306 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Scn4aQ9ER60 Olfr344-201ENSMUST00000075474 930 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Scn4aQ9ER60 Gm23264-201ENSMUST00000083372 107 ntBASIC3.33□□□□□ -1.88
Scn4aQ9ER60 Olfr1229-202ENSMUST00000213883 3594 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Scn4aQ9ER60 Fam111a-203ENSMUST00000144662 3912 ntAPPRIS P3 TSL 5 BASIC3.33□□□□□ -1.88
Scn4aQ9ER60 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Scn4aQ9ER60 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC3.33□□□□□ -1.88
Scn4aQ9ER60 Gm24671-201ENSMUST00000104159 158 ntBASIC3.33□□□□□ -1.88
Scn4aQ9ER60 Gm25560-201ENSMUST00000104606 176 ntBASIC3.33□□□□□ -1.88
Scn4aQ9ER60 AI847159-204ENSMUST00000148997 753 ntTSL 3 BASIC3.33□□□□□ -1.88
Scn4aQ9ER60 Gm5538-201ENSMUST00000168156 1235 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Scn4aQ9ER60 Gm10925-201ENSMUST00000189941 678 ntBASIC3.33□□□□□ -1.88
Scn4aQ9ER60 Gm9373-201ENSMUST00000208724 599 ntBASIC3.33□□□□□ -1.88
Scn4aQ9ER60 Gm23447-201ENSMUST00000082798 163 ntBASIC3.33□□□□□ -1.88
Scn4aQ9ER60 Gm23460-201ENSMUST00000083258 109 ntBASIC3.33□□□□□ -1.88
Scn4aQ9ER60 Olfr1040-201ENSMUST00000099909 942 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Scn4aQ9ER60 Gm43047-201ENSMUST00000200089 3460 ntBASIC3.32□□□□□ -1.88
Scn4aQ9ER60 4930440C22Rik-201ENSMUST00000185490 1565 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Scn4aQ9ER60 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Scn4aQ9ER60 Gm25832-201ENSMUST00000104140 130 ntBASIC3.32□□□□□ -1.88
Scn4aQ9ER60 Gm12106-201ENSMUST00000116006 1200 ntBASIC3.32□□□□□ -1.88
Scn4aQ9ER60 Gm15933-201ENSMUST00000117215 616 ntBASIC3.32□□□□□ -1.88
Scn4aQ9ER60 Gm13349-201ENSMUST00000118436 411 ntBASIC3.32□□□□□ -1.88
Scn4aQ9ER60 Gm22693-201ENSMUST00000175049 442 ntBASIC3.32□□□□□ -1.88
Scn4aQ9ER60 Gm22252-201ENSMUST00000179316 79 ntBASIC3.32□□□□□ -1.88
Scn4aQ9ER60 4930401A07Rik-201ENSMUST00000214657 746 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Scn4aQ9ER60 Gm19233-201ENSMUST00000219772 936 ntBASIC3.32□□□□□ -1.88
Scn4aQ9ER60 AC126043.1-201ENSMUST00000221304 1141 ntBASIC3.32□□□□□ -1.88
Scn4aQ9ER60 AC183092.2-201ENSMUST00000225542 1153 ntBASIC3.32□□□□□ -1.88
Scn4aQ9ER60 Gm26922-201ENSMUST00000082687 72 ntBASIC3.32□□□□□ -1.88
Scn4aQ9ER60 n-R5s220-201ENSMUST00000082926 120 ntBASIC3.32□□□□□ -1.88
Scn4aQ9ER60 Gm22575-201ENSMUST00000082981 110 ntBASIC3.32□□□□□ -1.88
Scn4aQ9ER60 5930409G06Rik-201ENSMUST00000192347 1544 ntBASIC3.32□□□□□ -1.88
Scn4aQ9ER60 Olfr1226-204ENSMUST00000215987 3251 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Scn4aQ9ER60 Gm37788-201ENSMUST00000193958 2705 ntBASIC3.31□□□□□ -1.88
Scn4aQ9ER60 Uty-205ENSMUST00000143286 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
Scn4aQ9ER60 Tcrg-C1-201ENSMUST00000103558 924 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Scn4aQ9ER60 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC3.31□□□□□ -1.88
Scn4aQ9ER60 Gm18397-201ENSMUST00000176704 587 ntBASIC3.31□□□□□ -1.88
Scn4aQ9ER60 Gm26621-201ENSMUST00000180413 700 ntTSL 2 BASIC3.31□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 89.2 ms