Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Gm13483-201ENSMUST00000123699 664 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
Scrt1Q99M85 Gm16274-201ENSMUST00000139251 592 ntBASIC2.87□□□□□ -1.95
Scrt1Q99M85 Gm12226-201ENSMUST00000144172 876 ntBASIC2.87□□□□□ -1.95
Scrt1Q99M85 Gm14651-201ENSMUST00000147192 442 ntBASIC2.87□□□□□ -1.95
Scrt1Q99M85 Gm11917-201ENSMUST00000154813 373 ntTSL 2 BASIC2.87□□□□□ -1.95
Scrt1Q99M85 Gm24910-201ENSMUST00000157289 272 ntBASIC2.87□□□□□ -1.95
Scrt1Q99M85 Gm24438-201ENSMUST00000157893 115 ntBASIC2.87□□□□□ -1.95
Scrt1Q99M85 Gm22841-201ENSMUST00000158443 62 ntBASIC2.87□□□□□ -1.95
Scrt1Q99M85 Gm23702-201ENSMUST00000158840 130 ntBASIC2.87□□□□□ -1.95
Scrt1Q99M85 Vmn1r-ps65-201ENSMUST00000174235 951 ntBASIC2.87□□□□□ -1.95
Scrt1Q99M85 Vmn1r-ps26-201ENSMUST00000174239 840 ntBASIC2.87□□□□□ -1.95
Scrt1Q99M85 Snord116l12-201ENSMUST00000179816 94 ntBASIC2.87□□□□□ -1.95
Scrt1Q99M85 Rpl31-ps21-201ENSMUST00000181182 374 ntBASIC2.87□□□□□ -1.95
Scrt1Q99M85 Mir6413-201ENSMUST00000184049 108 ntBASIC2.87□□□□□ -1.95
Scrt1Q99M85 Ms4a4a-201ENSMUST00000188995 836 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
Scrt1Q99M85 Gm20832-201ENSMUST00000189076 665 ntBASIC2.87□□□□□ -1.95
Scrt1Q99M85 Gm8403-201ENSMUST00000189712 1298 ntBASIC2.87□□□□□ -1.95
Scrt1Q99M85 Gm28675-201ENSMUST00000191096 675 ntTSL 5 BASIC2.87□□□□□ -1.95
Scrt1Q99M85 Gm38109-201ENSMUST00000195386 181 ntBASIC2.87□□□□□ -1.95
Scrt1Q99M85 Gm30638-201ENSMUST00000195570 656 ntBASIC2.87□□□□□ -1.95
Scrt1Q99M85 Gm36728-201ENSMUST00000195782 665 ntBASIC2.87□□□□□ -1.95
Scrt1Q99M85 Trav15d-3-201ENSMUST00000198604 167 ntBASIC2.87□□□□□ -1.95
Scrt1Q99M85 Gm19457-201ENSMUST00000200995 448 ntBASIC2.87□□□□□ -1.95
Scrt1Q99M85 Gm44256-201ENSMUST00000203304 335 ntBASIC2.87□□□□□ -1.95
Scrt1Q99M85 Olfr1435-ps1-201ENSMUST00000207773 249 ntBASIC2.87□□□□□ -1.95
Scrt1Q99M85 Gm17991-201ENSMUST00000208139 297 ntBASIC2.87□□□□□ -1.95
Scrt1Q99M85 Gm34783-201ENSMUST00000209159 303 ntBASIC2.87□□□□□ -1.95
Scrt1Q99M85 Olfr953-ps1-201ENSMUST00000214463 892 ntBASIC2.87□□□□□ -1.95
Scrt1Q99M85 Gm8125-201ENSMUST00000216602 738 ntBASIC2.87□□□□□ -1.95
Scrt1Q99M85 Olfr946-ps1-201ENSMUST00000217547 341 ntBASIC2.87□□□□□ -1.95
Scrt1Q99M85 Gm29809-201ENSMUST00000218423 493 ntBASIC2.87□□□□□ -1.95
Scrt1Q99M85 9130015A21Rik-201ENSMUST00000221491 651 ntTSL 2 BASIC2.87□□□□□ -1.95
Scrt1Q99M85 AC125223.1-203ENSMUST00000225304 498 ntBASIC2.87□□□□□ -1.95
Scrt1Q99M85 AC170810.3-201ENSMUST00000226177 374 ntBASIC2.87□□□□□ -1.95
Scrt1Q99M85 AC166344.2-201ENSMUST00000226747 374 ntBASIC2.87□□□□□ -1.95
Scrt1Q99M85 Fbxw28-201ENSMUST00000112039 1497 ntAPPRIS P4 TSL 1 (best) BASIC2.87□□□□□ -1.95
Scrt1Q99M85 4930533N22Rik-201ENSMUST00000206433 3509 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
Scrt1Q99M85 Olfr69-201ENSMUST00000106878 2829 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
Scrt1Q99M85 AC164297.6-201ENSMUST00000224643 1568 ntBASIC2.87□□□□□ -1.95
Scrt1Q99M85 AI504432-201ENSMUST00000070085 5569 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
Scrt1Q99M85 Olfr1143-202ENSMUST00000099852 2028 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Scrt1Q99M85 Gm45662-201ENSMUST00000210054 2098 ntBASIC2.86□□□□□ -1.95
Scrt1Q99M85 Gm15773-201ENSMUST00000118665 1448 ntBASIC2.86□□□□□ -1.95
Scrt1Q99M85 Sacs-203ENSMUST00000119943 14991 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
Scrt1Q99M85 Gm29221-201ENSMUST00000186092 2894 ntTSL 5 BASIC2.86□□□□□ -1.95
Scrt1Q99M85 Olfr965-202ENSMUST00000213335 1700 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Scrt1Q99M85 Gm25876-201ENSMUST00000104329 119 ntBASIC2.86□□□□□ -1.95
Scrt1Q99M85 Gm25507-201ENSMUST00000116981 144 ntBASIC2.86□□□□□ -1.95
Scrt1Q99M85 Mir1198-201ENSMUST00000116995 121 ntBASIC2.86□□□□□ -1.95
Scrt1Q99M85 Gm15266-201ENSMUST00000119635 255 ntBASIC2.86□□□□□ -1.95
Scrt1Q99M85 Gm13661-201ENSMUST00000154297 318 ntTSL 3 BASIC2.86□□□□□ -1.95
Scrt1Q99M85 Gm22836-201ENSMUST00000158441 61 ntBASIC2.86□□□□□ -1.95
Scrt1Q99M85 Gm20612-201ENSMUST00000176318 236 ntBASIC2.86□□□□□ -1.95
Scrt1Q99M85 Gm7173-203ENSMUST00000179788 1254 ntTSL 5 BASIC2.86□□□□□ -1.95
Scrt1Q99M85 Smr2-202ENSMUST00000196070 813 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
Scrt1Q99M85 Gm9379-201ENSMUST00000196790 646 ntBASIC2.86□□□□□ -1.95
Scrt1Q99M85 Igkv13-56-1-201ENSMUST00000198481 209 ntBASIC2.86□□□□□ -1.95
Scrt1Q99M85 Gm44320-201ENSMUST00000199276 86 ntBASIC2.86□□□□□ -1.95
Scrt1Q99M85 Gm44966-201ENSMUST00000208096 157 ntBASIC2.86□□□□□ -1.95
Scrt1Q99M85 Gm29884-201ENSMUST00000218403 453 ntBASIC2.86□□□□□ -1.95
Scrt1Q99M85 CT030161.1-201ENSMUST00000218411 124 ntBASIC2.86□□□□□ -1.95
Scrt1Q99M85 AC153564.2-201ENSMUST00000219464 273 ntBASIC2.86□□□□□ -1.95
Scrt1Q99M85 AC164117.2-201ENSMUST00000222090 327 ntBASIC2.86□□□□□ -1.95
Scrt1Q99M85 AC160958.1-201ENSMUST00000224833 368 ntBASIC2.86□□□□□ -1.95
Scrt1Q99M85 AL590614.1-201ENSMUST00000226037 268 ntBASIC2.86□□□□□ -1.95
Scrt1Q99M85 AC115291.1-201ENSMUST00000226803 258 ntBASIC2.86□□□□□ -1.95
Scrt1Q99M85 Tgif2lx2-201ENSMUST00000072518 1030 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
Scrt1Q99M85 Tgif2lx1-201ENSMUST00000073857 1030 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
Scrt1Q99M85 Gm23460-201ENSMUST00000083258 109 ntBASIC2.86□□□□□ -1.95
Scrt1Q99M85 Gm24928-201ENSMUST00000083399 107 ntBASIC2.86□□□□□ -1.95
Scrt1Q99M85 Gm25897-201ENSMUST00000083709 107 ntBASIC2.86□□□□□ -1.95
Scrt1Q99M85 Gm37064-201ENSMUST00000193851 2231 ntBASIC2.86□□□□□ -1.95
Scrt1Q99M85 Zfp62-212ENSMUST00000180016 3964 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Scrt1Q99M85 Olfr358-202ENSMUST00000216437 4962 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Scrt1Q99M85 Gm36969-201ENSMUST00000194551 2809 ntBASIC2.86□□□□□ -1.95
Scrt1Q99M85 Gm6325-201ENSMUST00000122015 3114 ntBASIC2.86□□□□□ -1.95
Scrt1Q99M85 Gm21814-203ENSMUST00000203729 1352 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
Scrt1Q99M85 Vmn1r45-203ENSMUST00000227122 2861 ntBASIC2.86□□□□□ -1.95
Scrt1Q99M85 Olfr729-203ENSMUST00000215327 4220 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
Scrt1Q99M85 Olfr729-204ENSMUST00000215451 4236 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
Scrt1Q99M85 Themis-201ENSMUST00000056097 5082 ntAPPRIS P2 TSL 1 (best) BASIC2.85□□□□□ -1.95
Scrt1Q99M85 Gm2093-201ENSMUST00000180518 3526 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
Scrt1Q99M85 Nlrp9a-202ENSMUST00000108387 3336 ntAPPRIS P4 TSL 1 (best) BASIC2.85□□□□□ -1.95
Scrt1Q99M85 Olfr681-204ENSMUST00000215564 4487 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
Scrt1Q99M85 Olfr1211-204ENSMUST00000215205 4220 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
Scrt1Q99M85 Gm2912-201ENSMUST00000223472 1799 ntTSL 5 BASIC2.85□□□□□ -1.95
Scrt1Q99M85 Vmn1r56-201ENSMUST00000169556 1832 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
Scrt1Q99M85 Trav10n-201ENSMUST00000103612 343 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
Scrt1Q99M85 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC2.85□□□□□ -1.95
Scrt1Q99M85 Gm24430-201ENSMUST00000104077 104 ntBASIC2.85□□□□□ -1.95
Scrt1Q99M85 Pbsn-202ENSMUST00000114041 697 ntTSL 2 BASIC2.85□□□□□ -1.95
Scrt1Q99M85 Gm13504-201ENSMUST00000117490 316 ntBASIC2.85□□□□□ -1.95
Scrt1Q99M85 Gm15951-201ENSMUST00000118377 400 ntBASIC2.85□□□□□ -1.95
Scrt1Q99M85 Gm12016-201ENSMUST00000119079 681 ntBASIC2.85□□□□□ -1.95
Scrt1Q99M85 Gm7071-201ENSMUST00000120458 462 ntBASIC2.85□□□□□ -1.95
Scrt1Q99M85 Vmn1r-ps135-201ENSMUST00000120909 595 ntBASIC2.85□□□□□ -1.95
Scrt1Q99M85 Junos-205ENSMUST00000130684 614 ntTSL 3 BASIC2.85□□□□□ -1.95
Scrt1Q99M85 Gm13324-201ENSMUST00000148607 569 ntTSL 3 BASIC2.85□□□□□ -1.95
Scrt1Q99M85 Gm22755-201ENSMUST00000157143 100 ntBASIC2.85□□□□□ -1.95
Scrt1Q99M85 Gm22322-201ENSMUST00000157151 111 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 76,532 protein–RNA pairs in 99.2 ms