Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Prl3c1-202ENSMUST00000110364 850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
Cstf3Q99LI7 Klra10-201ENSMUST00000112020 823 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Cstf3Q99LI7 Gm14579-201ENSMUST00000117068 283 ntBASIC3.42□□□□□ -1.86
Cstf3Q99LI7 Olfr1078-ps1-201ENSMUST00000117978 632 ntBASIC3.42□□□□□ -1.86
Cstf3Q99LI7 Gm11704-201ENSMUST00000120031 214 ntBASIC3.42□□□□□ -1.86
Cstf3Q99LI7 Gm14656-201ENSMUST00000120342 502 ntBASIC3.42□□□□□ -1.86
Cstf3Q99LI7 Gm16005-201ENSMUST00000120515 269 ntBASIC3.42□□□□□ -1.86
Cstf3Q99LI7 Gm14362-201ENSMUST00000121679 273 ntBASIC3.42□□□□□ -1.86
Cstf3Q99LI7 Gm15671-201ENSMUST00000124160 576 ntTSL 5 BASIC3.42□□□□□ -1.86
Cstf3Q99LI7 Gm13667-201ENSMUST00000132332 617 ntTSL 5 BASIC3.42□□□□□ -1.86
Cstf3Q99LI7 Gm5958-201ENSMUST00000147698 297 ntBASIC3.42□□□□□ -1.86
Cstf3Q99LI7 Gm15254-201ENSMUST00000149567 273 ntBASIC3.42□□□□□ -1.86
Cstf3Q99LI7 Gm25341-201ENSMUST00000157461 268 ntBASIC3.42□□□□□ -1.86
Cstf3Q99LI7 Gm23078-201ENSMUST00000157848 148 ntBASIC3.42□□□□□ -1.86
Cstf3Q99LI7 Gm23782-201ENSMUST00000157939 120 ntBASIC3.42□□□□□ -1.86
Cstf3Q99LI7 Gm25438-201ENSMUST00000158281 110 ntBASIC3.42□□□□□ -1.86
Cstf3Q99LI7 Gm15564-202ENSMUST00000173605 402 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Cstf3Q99LI7 Gm24713-201ENSMUST00000178850 107 ntBASIC3.42□□□□□ -1.86
Cstf3Q99LI7 Gm28010-201ENSMUST00000179485 126 ntBASIC3.42□□□□□ -1.86
Cstf3Q99LI7 Gm25448-201ENSMUST00000180065 107 ntBASIC3.42□□□□□ -1.86
Cstf3Q99LI7 Pnrc2-203ENSMUST00000180300 171 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Cstf3Q99LI7 Gm27028-201ENSMUST00000182303 399 ntBASIC3.42□□□□□ -1.86
Cstf3Q99LI7 Gm8197-201ENSMUST00000192906 363 ntTSL 5 BASIC3.42□□□□□ -1.86
Cstf3Q99LI7 Gm42832-201ENSMUST00000196361 745 ntBASIC3.42□□□□□ -1.86
Cstf3Q99LI7 Igkv13-74-1-201ENSMUST00000200611 242 ntBASIC3.42□□□□□ -1.86
Cstf3Q99LI7 Gm17906-201ENSMUST00000202480 901 ntBASIC3.42□□□□□ -1.86
Cstf3Q99LI7 AC140254.1-201ENSMUST00000220063 331 ntBASIC3.42□□□□□ -1.86
Cstf3Q99LI7 1700024I08Rik-203ENSMUST00000222372 754 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Cstf3Q99LI7 AC173482.2-201ENSMUST00000224044 750 ntBASIC3.42□□□□□ -1.86
Cstf3Q99LI7 CT010480.5-201ENSMUST00000225026 217 ntBASIC3.42□□□□□ -1.86
Cstf3Q99LI7 AC112972.1-201ENSMUST00000227329 365 ntBASIC3.42□□□□□ -1.86
Cstf3Q99LI7 S100a11-201ENSMUST00000029515 511 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Cstf3Q99LI7 Olfr1151-201ENSMUST00000061081 927 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Cstf3Q99LI7 Tas2r114-201ENSMUST00000080619 930 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Cstf3Q99LI7 Gm23848-201ENSMUST00000083826 106 ntBASIC3.42□□□□□ -1.86
Cstf3Q99LI7 Macf1-203ENSMUST00000097897 23495 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
Cstf3Q99LI7 Evi2b-201ENSMUST00000179322 1858 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Cstf3Q99LI7 Olfr1129-202ENSMUST00000213315 2255 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
Cstf3Q99LI7 Olfr470-203ENSMUST00000220193 3080 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Cstf3Q99LI7 Olfr1370-203ENSMUST00000215357 4285 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Cstf3Q99LI7 Npy6r-201ENSMUST00000042747 2567 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Cstf3Q99LI7 Olfr361-202ENSMUST00000214969 2749 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Cstf3Q99LI7 Vmn2r-ps104-201ENSMUST00000099416 1671 ntTSL 5 BASIC3.41□□□□□ -1.86
Cstf3Q99LI7 Tcrg-V5-201ENSMUST00000103556 293 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Cstf3Q99LI7 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Cstf3Q99LI7 Gm25169-201ENSMUST00000104190 129 ntBASIC3.41□□□□□ -1.86
Cstf3Q99LI7 Igkv13-87-201ENSMUST00000114214 286 ntBASIC3.41□□□□□ -1.86
Cstf3Q99LI7 Rpl10-ps4-201ENSMUST00000117120 286 ntBASIC3.41□□□□□ -1.86
Cstf3Q99LI7 Gm14868-201ENSMUST00000117840 216 ntBASIC3.41□□□□□ -1.86
Cstf3Q99LI7 Vmn1r-ps127-201ENSMUST00000118007 478 ntBASIC3.41□□□□□ -1.86
Cstf3Q99LI7 Gm12902-201ENSMUST00000118389 322 ntBASIC3.41□□□□□ -1.86
Cstf3Q99LI7 Gm15030-201ENSMUST00000119804 484 ntBASIC3.41□□□□□ -1.86
Cstf3Q99LI7 Gm11876-201ENSMUST00000120002 269 ntBASIC3.41□□□□□ -1.86
Cstf3Q99LI7 Mup-ps17-201ENSMUST00000120723 218 ntBASIC3.41□□□□□ -1.86
Cstf3Q99LI7 Gm15244-201ENSMUST00000121122 130 ntBASIC3.41□□□□□ -1.86
Cstf3Q99LI7 Gm14694-201ENSMUST00000121856 282 ntBASIC3.41□□□□□ -1.86
Cstf3Q99LI7 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC3.41□□□□□ -1.86
Cstf3Q99LI7 4930421P07Rik-201ENSMUST00000147322 399 ntBASIC3.41□□□□□ -1.86
Cstf3Q99LI7 Gm22516-201ENSMUST00000158266 124 ntBASIC3.41□□□□□ -1.86
Cstf3Q99LI7 Gm21758-201ENSMUST00000179336 819 ntBASIC3.41□□□□□ -1.86
Cstf3Q99LI7 Gm28364-201ENSMUST00000187908 334 ntTSL 3 BASIC3.41□□□□□ -1.86
Cstf3Q99LI7 Gm20832-201ENSMUST00000189076 665 ntBASIC3.41□□□□□ -1.86
Cstf3Q99LI7 Gm28404-201ENSMUST00000190242 453 ntBASIC3.41□□□□□ -1.86
Cstf3Q99LI7 Gm28241-201ENSMUST00000190916 235 ntBASIC3.41□□□□□ -1.86
Cstf3Q99LI7 Gm31511-201ENSMUST00000193134 657 ntBASIC3.41□□□□□ -1.86
Cstf3Q99LI7 Gm37239-201ENSMUST00000193510 141 ntBASIC3.41□□□□□ -1.86
Cstf3Q99LI7 Gm30638-201ENSMUST00000195570 656 ntBASIC3.41□□□□□ -1.86
Cstf3Q99LI7 Gm36728-201ENSMUST00000195782 665 ntBASIC3.41□□□□□ -1.86
Cstf3Q99LI7 Gm18429-201ENSMUST00000198707 421 ntBASIC3.41□□□□□ -1.86
Cstf3Q99LI7 Gm38395-201ENSMUST00000199904 830 ntBASIC3.41□□□□□ -1.86
Cstf3Q99LI7 Gm5322-201ENSMUST00000206142 699 ntBASIC3.41□□□□□ -1.86
Cstf3Q99LI7 Gm2676-201ENSMUST00000207279 606 ntBASIC3.41□□□□□ -1.86
Cstf3Q99LI7 Gm45341-201ENSMUST00000210850 1104 ntTSL 5 BASIC3.41□□□□□ -1.86
Cstf3Q99LI7 AC123062.1-201ENSMUST00000221287 481 ntBASIC3.41□□□□□ -1.86
Cstf3Q99LI7 Gm18921-201ENSMUST00000221798 366 ntBASIC3.41□□□□□ -1.86
Cstf3Q99LI7 AC164297.5-201ENSMUST00000224365 198 ntBASIC3.41□□□□□ -1.86
Cstf3Q99LI7 AC139350.4-201ENSMUST00000228483 798 ntBASIC3.41□□□□□ -1.86
Cstf3Q99LI7 Olfr308-201ENSMUST00000044256 1056 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Cstf3Q99LI7 Defb37-201ENSMUST00000066282 352 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Cstf3Q99LI7 Gm22245-201ENSMUST00000082479 103 ntBASIC3.41□□□□□ -1.86
Cstf3Q99LI7 Gm22229-201ENSMUST00000082987 108 ntBASIC3.41□□□□□ -1.86
Cstf3Q99LI7 Gm26055-201ENSMUST00000083038 107 ntBASIC3.41□□□□□ -1.86
Cstf3Q99LI7 Mir21a-201ENSMUST00000083521 92 ntBASIC3.41□□□□□ -1.86
Cstf3Q99LI7 Gm44120-201ENSMUST00000203022 3023 ntBASIC3.41□□□□□ -1.86
Cstf3Q99LI7 Olfr1477-201ENSMUST00000214274 3913 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
Cstf3Q99LI7 Olfr1466-202ENSMUST00000207124 1981 ntAPPRIS P1 TSL 3 BASIC3.4□□□□□ -1.86
Cstf3Q99LI7 Vmn2r49-201ENSMUST00000108550 2559 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
Cstf3Q99LI7 Vmn2r47-201ENSMUST00000170131 2559 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
Cstf3Q99LI7 Gm14657-201ENSMUST00000117461 302 ntBASIC3.4□□□□□ -1.87
Cstf3Q99LI7 Gm12492-201ENSMUST00000117665 564 ntBASIC3.4□□□□□ -1.87
Cstf3Q99LI7 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC3.4□□□□□ -1.87
Cstf3Q99LI7 Gm13122-201ENSMUST00000118380 453 ntBASIC3.4□□□□□ -1.87
Cstf3Q99LI7 Gm13804-201ENSMUST00000119552 172 ntBASIC3.4□□□□□ -1.87
Cstf3Q99LI7 Gm14049-201ENSMUST00000121009 636 ntBASIC3.4□□□□□ -1.87
Cstf3Q99LI7 Gm14810-201ENSMUST00000121628 486 ntBASIC3.4□□□□□ -1.87
Cstf3Q99LI7 Gm13565-201ENSMUST00000133596 700 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Cstf3Q99LI7 Gm11337-201ENSMUST00000144770 335 ntTSL 2 BASIC3.4□□□□□ -1.87
Cstf3Q99LI7 Gm26276-201ENSMUST00000157099 109 ntBASIC3.4□□□□□ -1.87
Cstf3Q99LI7 Gm24061-201ENSMUST00000157489 120 ntBASIC3.4□□□□□ -1.87
Cstf3Q99LI7 Gm24784-201ENSMUST00000157640 62 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 75.9 ms