Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 Gm24037-201ENSMUST00000082871 180 ntBASIC4.42□□□□□ -1.7
Ushbp1Q8R370 Gm25792-201ENSMUST00000083289 100 ntBASIC4.42□□□□□ -1.7
Ushbp1Q8R370 Olfr992-201ENSMUST00000099927 930 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Ushbp1Q8R370 Olfr301-201ENSMUST00000174362 1937 ntAPPRIS P1 TSL 3 BASIC4.42□□□□□ -1.7
Ushbp1Q8R370 Skint3-201ENSMUST00000038455 3627 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
Ushbp1Q8R370 Adam5-201ENSMUST00000050300 2560 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
Ushbp1Q8R370 Jmjd1c-206ENSMUST00000173689 8609 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
Ushbp1Q8R370 Olfr665-202ENSMUST00000215761 2522 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Ushbp1Q8R370 Gm26396-201ENSMUST00000104093 132 ntBASIC4.41□□□□□ -1.7
Ushbp1Q8R370 Gm13268-201ENSMUST00000117485 433 ntBASIC4.41□□□□□ -1.7
Ushbp1Q8R370 Gm11322-201ENSMUST00000118095 435 ntBASIC4.41□□□□□ -1.7
Ushbp1Q8R370 Gm13475-201ENSMUST00000119290 234 ntBASIC4.41□□□□□ -1.7
Ushbp1Q8R370 Gm12137-201ENSMUST00000119565 346 ntBASIC4.41□□□□□ -1.7
Ushbp1Q8R370 Gm15037-201ENSMUST00000120358 259 ntBASIC4.41□□□□□ -1.7
Ushbp1Q8R370 Gm14364-201ENSMUST00000129209 267 ntBASIC4.41□□□□□ -1.7
Ushbp1Q8R370 Gm24850-201ENSMUST00000158029 119 ntBASIC4.41□□□□□ -1.7
Ushbp1Q8R370 Gm24810-201ENSMUST00000175317 70 ntBASIC4.41□□□□□ -1.7
Ushbp1Q8R370 Gm22120-201ENSMUST00000175590 70 ntBASIC4.41□□□□□ -1.7
Ushbp1Q8R370 Fam107b-206ENSMUST00000176254 300 ntTSL 5 BASIC4.41□□□□□ -1.7
Ushbp1Q8R370 Gm25314-201ENSMUST00000178810 79 ntBASIC4.41□□□□□ -1.7
Ushbp1Q8R370 Gm26556-201ENSMUST00000180645 320 ntBASIC4.41□□□□□ -1.7
Ushbp1Q8R370 Gm27028-201ENSMUST00000182303 399 ntBASIC4.41□□□□□ -1.7
Ushbp1Q8R370 Gm19243-201ENSMUST00000198592 269 ntBASIC4.41□□□□□ -1.7
Ushbp1Q8R370 Gm19726-201ENSMUST00000205008 240 ntBASIC4.41□□□□□ -1.7
Ushbp1Q8R370 Fth-ps3-201ENSMUST00000210405 358 ntBASIC4.41□□□□□ -1.7
Ushbp1Q8R370 Gm18252-201ENSMUST00000214814 527 ntTSL 5 BASIC4.41□□□□□ -1.7
Ushbp1Q8R370 AC136976.1-201ENSMUST00000221440 381 ntTSL 3 BASIC4.41□□□□□ -1.7
Ushbp1Q8R370 AC165366.1-201ENSMUST00000225905 505 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Ushbp1Q8R370 Defb14-201ENSMUST00000052601 204 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Ushbp1Q8R370 Gm42447-201ENSMUST00000200102 2903 ntBASIC4.41□□□□□ -1.7
Ushbp1Q8R370 Glra3-201ENSMUST00000000275 6508 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Ushbp1Q8R370 Gm37802-201ENSMUST00000194998 2643 ntBASIC4.41□□□□□ -1.7
Ushbp1Q8R370 AC158805.1-201ENSMUST00000218197 2631 ntBASIC4.41□□□□□ -1.7
Ushbp1Q8R370 Gm43924-201ENSMUST00000204851 1736 ntBASIC4.41□□□□□ -1.7
Ushbp1Q8R370 St8sia4-204ENSMUST00000189556 10027 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
Ushbp1Q8R370 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
Ushbp1Q8R370 Gm3584-201ENSMUST00000173822 2565 ntBASIC4.4□□□□□ -1.7
Ushbp1Q8R370 Olfr1102-202ENSMUST00000214002 1806 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
Ushbp1Q8R370 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC4.4□□□□□ -1.7
Ushbp1Q8R370 Ddi1-201ENSMUST00000051706 7114 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Ushbp1Q8R370 Nlrp4c-201ENSMUST00000037728 3615 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Ushbp1Q8R370 Ighv1-47-201ENSMUST00000103518 294 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Ushbp1Q8R370 Rpl10-ps4-201ENSMUST00000117120 286 ntBASIC4.4□□□□□ -1.71
Ushbp1Q8R370 Gm14987-201ENSMUST00000117820 676 ntBASIC4.4□□□□□ -1.71
Ushbp1Q8R370 Gm11813-201ENSMUST00000118586 291 ntBASIC4.4□□□□□ -1.71
Ushbp1Q8R370 Gm12294-201ENSMUST00000119723 490 ntBASIC4.4□□□□□ -1.71
Ushbp1Q8R370 Gm13852-201ENSMUST00000122350 242 ntBASIC4.4□□□□□ -1.71
Ushbp1Q8R370 Gm4916-201ENSMUST00000126139 642 ntBASIC4.4□□□□□ -1.71
Ushbp1Q8R370 Gm22769-201ENSMUST00000158367 98 ntBASIC4.4□□□□□ -1.71
Ushbp1Q8R370 Gm23198-201ENSMUST00000158811 91 ntBASIC4.4□□□□□ -1.71
Ushbp1Q8R370 Spin2g-201ENSMUST00000178425 687 ntBASIC4.4□□□□□ -1.71
Ushbp1Q8R370 Gm25156-201ENSMUST00000179809 79 ntBASIC4.4□□□□□ -1.71
Ushbp1Q8R370 Rpl31-ps7-201ENSMUST00000180629 379 ntBASIC4.4□□□□□ -1.71
Ushbp1Q8R370 Gm37104-201ENSMUST00000193278 196 ntBASIC4.4□□□□□ -1.71
Ushbp1Q8R370 Gm8747-201ENSMUST00000195392 751 ntBASIC4.4□□□□□ -1.71
Ushbp1Q8R370 Olfr1176-201ENSMUST00000057439 949 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Ushbp1Q8R370 Snord14e-201ENSMUST00000082857 90 ntBASIC4.4□□□□□ -1.71
Ushbp1Q8R370 Gm23345-201ENSMUST00000083817 150 ntBASIC4.4□□□□□ -1.71
Ushbp1Q8R370 Gm3867-201ENSMUST00000086108 279 ntBASIC4.4□□□□□ -1.71
Ushbp1Q8R370 Olfr713-201ENSMUST00000098139 975 ntBASIC4.4□□□□□ -1.71
Ushbp1Q8R370 1810006J02Rik-201ENSMUST00000186473 1687 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Ushbp1Q8R370 Gm43327-201ENSMUST00000199285 4055 ntBASIC4.4□□□□□ -1.71
Ushbp1Q8R370 Olfr194-203ENSMUST00000216519 3705 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Ushbp1Q8R370 Senp8-203ENSMUST00000177963 3792 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
Ushbp1Q8R370 Vmn1r174-202ENSMUST00000228331 9058 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Ushbp1Q8R370 AC167360.1-201ENSMUST00000222596 2494 ntBASIC4.39□□□□□ -1.71
Ushbp1Q8R370 Gm14636-202ENSMUST00000150801 5060 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Ushbp1Q8R370 Vmn1r46-202ENSMUST00000205088 10770 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
Ushbp1Q8R370 A430106G13Rik-201ENSMUST00000182158 3388 ntBASIC4.39□□□□□ -1.71
Ushbp1Q8R370 Gm45792-201ENSMUST00000207795 4268 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Ushbp1Q8R370 Vmn1r216-203ENSMUST00000228389 10213 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Ushbp1Q8R370 Gm45176-201ENSMUST00000207696 4096 ntBASIC4.39□□□□□ -1.71
Ushbp1Q8R370 Olfr1369-ps1-203ENSMUST00000213922 3930 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Ushbp1Q8R370 9530051G07Rik-201ENSMUST00000127673 4414 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Ushbp1Q8R370 Gm29221-201ENSMUST00000186092 2894 ntTSL 5 BASIC4.39□□□□□ -1.71
Ushbp1Q8R370 Gm26273-201ENSMUST00000104180 131 ntBASIC4.39□□□□□ -1.71
Ushbp1Q8R370 Gm3443-201ENSMUST00000112772 285 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
Ushbp1Q8R370 Rpl31-ps5-201ENSMUST00000118086 375 ntBASIC4.39□□□□□ -1.71
Ushbp1Q8R370 Gm14282-201ENSMUST00000119484 240 ntBASIC4.39□□□□□ -1.71
Ushbp1Q8R370 Gm7308-201ENSMUST00000121087 447 ntBASIC4.39□□□□□ -1.71
Ushbp1Q8R370 Tarbp2-207ENSMUST00000142114 420 ntTSL 5 BASIC4.39□□□□□ -1.71
Ushbp1Q8R370 Gm24418-201ENSMUST00000177597 79 ntBASIC4.39□□□□□ -1.71
Ushbp1Q8R370 Gm24639-201ENSMUST00000178518 79 ntBASIC4.39□□□□□ -1.71
Ushbp1Q8R370 Gm23076-201ENSMUST00000179082 79 ntBASIC4.39□□□□□ -1.71
Ushbp1Q8R370 Gm25077-201ENSMUST00000179157 79 ntBASIC4.39□□□□□ -1.71
Ushbp1Q8R370 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC4.39□□□□□ -1.71
Ushbp1Q8R370 1700024B18Rik-201ENSMUST00000190088 423 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Ushbp1Q8R370 Gm17781-201ENSMUST00000195232 649 ntBASIC4.39□□□□□ -1.71
Ushbp1Q8R370 Gm43424-201ENSMUST00000200484 253 ntBASIC4.39□□□□□ -1.71
Ushbp1Q8R370 Gm43976-201ENSMUST00000203637 235 ntBASIC4.39□□□□□ -1.71
Ushbp1Q8R370 Gm44687-201ENSMUST00000204975 235 ntBASIC4.39□□□□□ -1.71
Ushbp1Q8R370 AC160865.1-201ENSMUST00000219873 151 ntBASIC4.39□□□□□ -1.71
Ushbp1Q8R370 AC133076.1-201ENSMUST00000228074 484 ntBASIC4.39□□□□□ -1.71
Ushbp1Q8R370 Olfr835-201ENSMUST00000059315 936 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Ushbp1Q8R370 Gm7984-201ENSMUST00000060640 538 ntBASIC4.39□□□□□ -1.71
Ushbp1Q8R370 Gm22868-201ENSMUST00000083955 164 ntBASIC4.39□□□□□ -1.71
Ushbp1Q8R370 Olfr910-201ENSMUST00000215122 1996 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Ushbp1Q8R370 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Ushbp1Q8R370 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Ushbp1Q8R370 Klra2-201ENSMUST00000032306 1799 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 94.3 ms