Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Defb7-201ENSMUST00000047851 306 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Chmp7Q8R1T1 Gm23677-201ENSMUST00000083156 104 ntBASIC5.43□□□□□ -1.54
Chmp7Q8R1T1 Gm23451-201ENSMUST00000083328 122 ntBASIC5.43□□□□□ -1.54
Chmp7Q8R1T1 Cd300ld2-201ENSMUST00000092463 381 ntTSL 5 BASIC5.43□□□□□ -1.54
Chmp7Q8R1T1 Olfr575-202ENSMUST00000213477 3512 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Chmp7Q8R1T1 Vmn2r35-201ENSMUST00000169683 2586 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Chmp7Q8R1T1 Gm43260-201ENSMUST00000197378 2430 ntBASIC5.43□□□□□ -1.54
Chmp7Q8R1T1 Gm15304-201ENSMUST00000122150 2640 ntBASIC5.43□□□□□ -1.54
Chmp7Q8R1T1 Vmn1r184-204ENSMUST00000227534 4807 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Chmp7Q8R1T1 Peli1-202ENSMUST00000101477 3703 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Chmp7Q8R1T1 Gm14429-201ENSMUST00000121881 2024 ntBASIC5.42□□□□□ -1.54
Chmp7Q8R1T1 Olfr1366-202ENSMUST00000175637 3045 ntAPPRIS ALT2 TSL 3 BASIC5.42□□□□□ -1.54
Chmp7Q8R1T1 Gm15151-201ENSMUST00000117106 177 ntBASIC5.42□□□□□ -1.54
Chmp7Q8R1T1 Gm11576-201ENSMUST00000117433 417 ntBASIC5.42□□□□□ -1.54
Chmp7Q8R1T1 Gm15994-201ENSMUST00000118029 402 ntBASIC5.42□□□□□ -1.54
Chmp7Q8R1T1 Gm15553-201ENSMUST00000118757 430 ntBASIC5.42□□□□□ -1.54
Chmp7Q8R1T1 Gm8217-201ENSMUST00000119136 465 ntBASIC5.42□□□□□ -1.54
Chmp7Q8R1T1 Gm22958-201ENSMUST00000122512 184 ntBASIC5.42□□□□□ -1.54
Chmp7Q8R1T1 Gm4916-201ENSMUST00000126139 642 ntBASIC5.42□□□□□ -1.54
Chmp7Q8R1T1 Gm16155-201ENSMUST00000155180 338 ntTSL 3 BASIC5.42□□□□□ -1.54
Chmp7Q8R1T1 Gm23098-201ENSMUST00000157552 299 ntBASIC5.42□□□□□ -1.54
Chmp7Q8R1T1 Gm22891-201ENSMUST00000158641 164 ntBASIC5.42□□□□□ -1.54
Chmp7Q8R1T1 Gm25643-201ENSMUST00000158874 103 ntBASIC5.42□□□□□ -1.54
Chmp7Q8R1T1 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Chmp7Q8R1T1 Gm9022-202ENSMUST00000183285 483 ntBASIC5.42□□□□□ -1.54
Chmp7Q8R1T1 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
Chmp7Q8R1T1 Ighv1-17-1-201ENSMUST00000194849 351 ntBASIC5.42□□□□□ -1.54
Chmp7Q8R1T1 Mir691-201ENSMUST00000199719 78 ntBASIC5.42□□□□□ -1.54
Chmp7Q8R1T1 Gm44583-201ENSMUST00000207478 281 ntBASIC5.42□□□□□ -1.54
Chmp7Q8R1T1 Gm35552-201ENSMUST00000214355 396 ntTSL 5 BASIC5.42□□□□□ -1.54
Chmp7Q8R1T1 AC153361.2-201ENSMUST00000218188 481 ntTSL 5 BASIC5.42□□□□□ -1.54
Chmp7Q8R1T1 Gm29774-201ENSMUST00000219270 436 ntBASIC5.42□□□□□ -1.54
Chmp7Q8R1T1 CT025536.1-201ENSMUST00000226744 844 ntBASIC5.42□□□□□ -1.54
Chmp7Q8R1T1 Vmn2r6-201ENSMUST00000165012 2484 ntAPPRIS P2 TSL 5 BASIC5.42□□□□□ -1.54
Chmp7Q8R1T1 Vmn2r7-203ENSMUST00000168072 2484 ntAPPRIS P2 TSL 5 BASIC5.42□□□□□ -1.54
Chmp7Q8R1T1 Cnot2-213ENSMUST00000169921 2120 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Chmp7Q8R1T1 Olfr1226-203ENSMUST00000215562 2669 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Chmp7Q8R1T1 Chst9-201ENSMUST00000053017 1620 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Chmp7Q8R1T1 Pot1a-203ENSMUST00000115330 3151 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Chmp7Q8R1T1 Olfr353-203ENSMUST00000217215 4173 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Chmp7Q8R1T1 Mdn1-201ENSMUST00000071642 17970 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
Chmp7Q8R1T1 Gm20667-201ENSMUST00000175674 1930 ntBASIC5.41□□□□□ -1.54
Chmp7Q8R1T1 Gm23941-201ENSMUST00000101953 107 ntBASIC5.41□□□□□ -1.54
Chmp7Q8R1T1 Ighv1-34-201ENSMUST00000103512 388 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Chmp7Q8R1T1 Gm26075-201ENSMUST00000104062 121 ntBASIC5.41□□□□□ -1.54
Chmp7Q8R1T1 Gm23226-201ENSMUST00000116927 103 ntBASIC5.41□□□□□ -1.54
Chmp7Q8R1T1 Gm23988-201ENSMUST00000117034 122 ntBASIC5.41□□□□□ -1.54
Chmp7Q8R1T1 Gm14868-201ENSMUST00000117840 216 ntBASIC5.41□□□□□ -1.54
Chmp7Q8R1T1 Gm13880-201ENSMUST00000118421 474 ntBASIC5.41□□□□□ -1.54
Chmp7Q8R1T1 Gm14269-201ENSMUST00000120455 306 ntBASIC5.41□□□□□ -1.54
Chmp7Q8R1T1 Gm15263-201ENSMUST00000121556 642 ntBASIC5.41□□□□□ -1.54
Chmp7Q8R1T1 Gm11931-201ENSMUST00000121630 447 ntBASIC5.41□□□□□ -1.54
Chmp7Q8R1T1 Gm22849-201ENSMUST00000157713 307 ntBASIC5.41□□□□□ -1.54
Chmp7Q8R1T1 Gm22156-201ENSMUST00000158409 141 ntBASIC5.41□□□□□ -1.54
Chmp7Q8R1T1 Gm27410-201ENSMUST00000183851 115 ntBASIC5.41□□□□□ -1.54
Chmp7Q8R1T1 Gm5368-201ENSMUST00000189012 589 ntBASIC5.41□□□□□ -1.54
Chmp7Q8R1T1 Igkv13-64-201ENSMUST00000198143 343 ntBASIC5.41□□□□□ -1.54
Chmp7Q8R1T1 Olfr580-ps1-201ENSMUST00000210528 943 ntBASIC5.41□□□□□ -1.54
Chmp7Q8R1T1 AC159629.1-201ENSMUST00000220698 568 ntTSL 2 BASIC5.41□□□□□ -1.54
Chmp7Q8R1T1 AC139750.2-201ENSMUST00000224424 386 ntBASIC5.41□□□□□ -1.54
Chmp7Q8R1T1 AC154618.1-201ENSMUST00000227451 303 ntBASIC5.41□□□□□ -1.54
Chmp7Q8R1T1 Sprr2i-201ENSMUST00000047264 617 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Chmp7Q8R1T1 Gm25801-201ENSMUST00000082638 106 ntBASIC5.41□□□□□ -1.54
Chmp7Q8R1T1 Gm25755-201ENSMUST00000083396 107 ntBASIC5.41□□□□□ -1.54
Chmp7Q8R1T1 Gm25207-201ENSMUST00000093745 107 ntBASIC5.41□□□□□ -1.54
Chmp7Q8R1T1 0610010F05Rik-202ENSMUST00000093267 3646 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
Chmp7Q8R1T1 Tenm1-202ENSMUST00000115058 12837 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
Chmp7Q8R1T1 Vmn2r21-201ENSMUST00000163607 2562 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Chmp7Q8R1T1 Vmn2r20-201ENSMUST00000172199 2562 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Chmp7Q8R1T1 Pcsk2os2-201ENSMUST00000153878 3370 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Chmp7Q8R1T1 B230206I08Rik-201ENSMUST00000207479 3191 ntBASIC5.41□□□□□ -1.54
Chmp7Q8R1T1 Fam169a-202ENSMUST00000169863 6013 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Chmp7Q8R1T1 Zfp101-204ENSMUST00000174512 3743 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Chmp7Q8R1T1 Olfr113-201ENSMUST00000216181 1671 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Chmp7Q8R1T1 Tfpi-205ENSMUST00000111717 2962 ntTSL 5 BASIC5.4□□□□□ -1.54
Chmp7Q8R1T1 Olfr556-203ENSMUST00000217526 3741 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Chmp7Q8R1T1 Olfr393-202ENSMUST00000213365 4048 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Chmp7Q8R1T1 Igkv5-45-201ENSMUST00000103366 385 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Chmp7Q8R1T1 Mir105-201ENSMUST00000104655 80 ntBASIC5.4□□□□□ -1.54
Chmp7Q8R1T1 Spink2-202ENSMUST00000120429 594 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Chmp7Q8R1T1 Gm8880-201ENSMUST00000121800 454 ntBASIC5.4□□□□□ -1.54
Chmp7Q8R1T1 2310016D23Rik-201ENSMUST00000130082 388 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Chmp7Q8R1T1 4930406D18Rik-202ENSMUST00000152827 657 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Chmp7Q8R1T1 Gm24850-201ENSMUST00000158029 119 ntBASIC5.4□□□□□ -1.54
Chmp7Q8R1T1 Gm22435-201ENSMUST00000158552 128 ntBASIC5.4□□□□□ -1.54
Chmp7Q8R1T1 Gm22135-201ENSMUST00000158752 108 ntBASIC5.4□□□□□ -1.54
Chmp7Q8R1T1 Mir1251-201ENSMUST00000175486 84 ntBASIC5.4□□□□□ -1.54
Chmp7Q8R1T1 Gm3434-202ENSMUST00000184421 521 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Chmp7Q8R1T1 4930532M18Rik-202ENSMUST00000190980 534 ntTSL 3 BASIC5.4□□□□□ -1.54
Chmp7Q8R1T1 Gm37568-201ENSMUST00000191755 364 ntBASIC5.4□□□□□ -1.54
Chmp7Q8R1T1 Gm8939-201ENSMUST00000192577 964 ntBASIC5.4□□□□□ -1.54
Chmp7Q8R1T1 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC5.4□□□□□ -1.54
Chmp7Q8R1T1 Fth-ps3-201ENSMUST00000210405 358 ntBASIC5.4□□□□□ -1.54
Chmp7Q8R1T1 Gm45313-201ENSMUST00000210584 178 ntBASIC5.4□□□□□ -1.54
Chmp7Q8R1T1 Gm46389-201ENSMUST00000223199 392 ntBASIC5.4□□□□□ -1.54
Chmp7Q8R1T1 AC154358.1-201ENSMUST00000224871 218 ntBASIC5.4□□□□□ -1.54
Chmp7Q8R1T1 AC154515.2-201ENSMUST00000226093 406 ntBASIC5.4□□□□□ -1.54
Chmp7Q8R1T1 S100a11-201ENSMUST00000029515 511 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Chmp7Q8R1T1 Mir132-201ENSMUST00000083603 66 ntBASIC5.4□□□□□ -1.54
Chmp7Q8R1T1 Cnot4-203ENSMUST00000114993 3473 ntAPPRIS P4 TSL 1 (best) BASIC5.4□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 87.1 ms