Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Pou2f1-208ENSMUST00000160260 13022 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
Pcdhb7Q8CDY9 Gm43329-201ENSMUST00000200120 3232 ntBASIC5.09□□□□□ -1.59
Pcdhb7Q8CDY9 Vmn1r197-203ENSMUST00000227017 5158 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Pcdhb7Q8CDY9 Gm25538-201ENSMUST00000101943 107 ntBASIC5.09□□□□□ -1.59
Pcdhb7Q8CDY9 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Pcdhb7Q8CDY9 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Pcdhb7Q8CDY9 Mir465b-1-201ENSMUST00000103940 79 ntBASIC5.09□□□□□ -1.59
Pcdhb7Q8CDY9 Gm24172-201ENSMUST00000104127 117 ntBASIC5.09□□□□□ -1.59
Pcdhb7Q8CDY9 Mir465b-2-201ENSMUST00000104662 79 ntBASIC5.09□□□□□ -1.59
Pcdhb7Q8CDY9 Gm21637-201ENSMUST00000105124 778 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Pcdhb7Q8CDY9 Rps15a-ps4-201ENSMUST00000119415 392 ntBASIC5.09□□□□□ -1.59
Pcdhb7Q8CDY9 Gm14521-201ENSMUST00000119545 350 ntBASIC5.09□□□□□ -1.59
Pcdhb7Q8CDY9 Gm14714-201ENSMUST00000119743 439 ntBASIC5.09□□□□□ -1.59
Pcdhb7Q8CDY9 Gm13557-201ENSMUST00000120771 382 ntBASIC5.09□□□□□ -1.59
Pcdhb7Q8CDY9 Gm23250-201ENSMUST00000157444 267 ntBASIC5.09□□□□□ -1.59
Pcdhb7Q8CDY9 Gm23219-201ENSMUST00000158123 87 ntBASIC5.09□□□□□ -1.59
Pcdhb7Q8CDY9 Gas5-209ENSMUST00000159663 346 ntTSL 3 BASIC5.09□□□□□ -1.59
Pcdhb7Q8CDY9 Aste1-207ENSMUST00000176940 1151 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
Pcdhb7Q8CDY9 Gm20651-201ENSMUST00000177219 329 ntBASIC5.09□□□□□ -1.59
Pcdhb7Q8CDY9 Gm5285-201ENSMUST00000193089 666 ntBASIC5.09□□□□□ -1.59
Pcdhb7Q8CDY9 Ighv1-27-201ENSMUST00000194473 340 ntBASIC5.09□□□□□ -1.59
Pcdhb7Q8CDY9 1700063I16Rik-201ENSMUST00000194611 611 ntBASIC5.09□□□□□ -1.59
Pcdhb7Q8CDY9 Gm4321-201ENSMUST00000200520 442 ntBASIC5.09□□□□□ -1.59
Pcdhb7Q8CDY9 Gm32222-201ENSMUST00000203296 298 ntBASIC5.09□□□□□ -1.59
Pcdhb7Q8CDY9 Gm7468-201ENSMUST00000203900 652 ntBASIC5.09□□□□□ -1.59
Pcdhb7Q8CDY9 Gm43955-201ENSMUST00000204332 142 ntBASIC5.09□□□□□ -1.59
Pcdhb7Q8CDY9 Gm17811-201ENSMUST00000206193 387 ntBASIC5.09□□□□□ -1.59
Pcdhb7Q8CDY9 AC154636.2-201ENSMUST00000222538 161 ntBASIC5.09□□□□□ -1.59
Pcdhb7Q8CDY9 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Pcdhb7Q8CDY9 Gm26454-201ENSMUST00000082682 107 ntBASIC5.09□□□□□ -1.59
Pcdhb7Q8CDY9 Gm26163-201ENSMUST00000083792 178 ntBASIC5.09□□□□□ -1.59
Pcdhb7Q8CDY9 Vmn2r-ps102-201ENSMUST00000222577 2203 ntBASIC5.09□□□□□ -1.59
Pcdhb7Q8CDY9 Gm38260-201ENSMUST00000193573 3995 ntBASIC5.09□□□□□ -1.6
Pcdhb7Q8CDY9 Vmn1r34-202ENSMUST00000226262 2952 ntAPPRIS P1 BASIC5.09□□□□□ -1.6
Pcdhb7Q8CDY9 Gm38010-201ENSMUST00000192592 2784 ntBASIC5.09□□□□□ -1.6
Pcdhb7Q8CDY9 AC122840.2-201ENSMUST00000221030 2659 ntBASIC5.09□□□□□ -1.6
Pcdhb7Q8CDY9 Vmn1r62-201ENSMUST00000173956 1757 ntAPPRIS P1 BASIC5.09□□□□□ -1.6
Pcdhb7Q8CDY9 Serpini1-201ENSMUST00000029423 4091 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Pcdhb7Q8CDY9 Olfr1459-202ENSMUST00000213493 8854 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Pcdhb7Q8CDY9 Btf3l4-204ENSMUST00000102742 3141 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Pcdhb7Q8CDY9 Olfr1389-202ENSMUST00000216641 3707 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Pcdhb7Q8CDY9 Fat1-206ENSMUST00000215588 13938 ntTSL 5 BASIC5.08□□□□□ -1.6
Pcdhb7Q8CDY9 Gm45321-201ENSMUST00000209286 2863 ntTSL 5 BASIC5.08□□□□□ -1.6
Pcdhb7Q8CDY9 Gm26869-201ENSMUST00000181241 3523 ntTSL 2 BASIC5.08□□□□□ -1.6
Pcdhb7Q8CDY9 Vmn2r109-201ENSMUST00000167093 2577 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Pcdhb7Q8CDY9 Gm24429-201ENSMUST00000104076 132 ntBASIC5.08□□□□□ -1.6
Pcdhb7Q8CDY9 Gm24230-201ENSMUST00000104313 129 ntBASIC5.08□□□□□ -1.6
Pcdhb7Q8CDY9 Gm11971-201ENSMUST00000117715 288 ntBASIC5.08□□□□□ -1.6
Pcdhb7Q8CDY9 Gm15313-201ENSMUST00000119179 282 ntBASIC5.08□□□□□ -1.6
Pcdhb7Q8CDY9 Gm11481-201ENSMUST00000120069 255 ntBASIC5.08□□□□□ -1.6
Pcdhb7Q8CDY9 Defa-ps8-201ENSMUST00000120972 279 ntBASIC5.08□□□□□ -1.6
Pcdhb7Q8CDY9 Gm16220-201ENSMUST00000131874 405 ntTSL 3 BASIC5.08□□□□□ -1.6
Pcdhb7Q8CDY9 Gm26414-201ENSMUST00000157674 269 ntBASIC5.08□□□□□ -1.6
Pcdhb7Q8CDY9 Gm24392-201ENSMUST00000158136 103 ntBASIC5.08□□□□□ -1.6
Pcdhb7Q8CDY9 Gm24006-201ENSMUST00000158462 132 ntBASIC5.08□□□□□ -1.6
Pcdhb7Q8CDY9 Gm24885-201ENSMUST00000158783 270 ntBASIC5.08□□□□□ -1.6
Pcdhb7Q8CDY9 Gm24667-201ENSMUST00000158938 103 ntBASIC5.08□□□□□ -1.6
Pcdhb7Q8CDY9 Gm2950-201ENSMUST00000185530 520 ntBASIC5.08□□□□□ -1.6
Pcdhb7Q8CDY9 Gm37624-201ENSMUST00000193751 219 ntBASIC5.08□□□□□ -1.6
Pcdhb7Q8CDY9 Igkv9-128-201ENSMUST00000196602 353 ntBASIC5.08□□□□□ -1.6
Pcdhb7Q8CDY9 Gm36535-201ENSMUST00000198395 511 ntTSL 3 BASIC5.08□□□□□ -1.6
Pcdhb7Q8CDY9 4930487D11Rik-201ENSMUST00000201983 295 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Pcdhb7Q8CDY9 Gm43945-201ENSMUST00000203595 754 ntBASIC5.08□□□□□ -1.6
Pcdhb7Q8CDY9 AC123803.1-201ENSMUST00000216093 189 ntBASIC5.08□□□□□ -1.6
Pcdhb7Q8CDY9 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC5.08□□□□□ -1.6
Pcdhb7Q8CDY9 AC157515.1-201ENSMUST00000220953 450 ntBASIC5.08□□□□□ -1.6
Pcdhb7Q8CDY9 AC121599.1-201ENSMUST00000224276 449 ntBASIC5.08□□□□□ -1.6
Pcdhb7Q8CDY9 AC154276.2-201ENSMUST00000227707 309 ntBASIC5.08□□□□□ -1.6
Pcdhb7Q8CDY9 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Pcdhb7Q8CDY9 AC154846.2-201ENSMUST00000228805 424 ntBASIC5.08□□□□□ -1.6
Pcdhb7Q8CDY9 Gm25081-201ENSMUST00000082534 108 ntBASIC5.08□□□□□ -1.6
Pcdhb7Q8CDY9 Gm23330-201ENSMUST00000082660 164 ntBASIC5.08□□□□□ -1.6
Pcdhb7Q8CDY9 Gm25698-201ENSMUST00000082897 107 ntBASIC5.08□□□□□ -1.6
Pcdhb7Q8CDY9 Gm26204-201ENSMUST00000082906 107 ntBASIC5.08□□□□□ -1.6
Pcdhb7Q8CDY9 Gm25260-201ENSMUST00000083053 134 ntBASIC5.08□□□□□ -1.6
Pcdhb7Q8CDY9 Mir20a-201ENSMUST00000083508 107 ntBASIC5.08□□□□□ -1.6
Pcdhb7Q8CDY9 Olfr32-204ENSMUST00000215153 3117 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
Pcdhb7Q8CDY9 AC112274.1-201ENSMUST00000218957 4274 ntBASIC5.08□□□□□ -1.6
Pcdhb7Q8CDY9 Gm38020-201ENSMUST00000193066 4676 ntBASIC5.08□□□□□ -1.6
Pcdhb7Q8CDY9 Ccr9-204ENSMUST00000168910 2888 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Pcdhb7Q8CDY9 Olfr1286-202ENSMUST00000184954 3398 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
Pcdhb7Q8CDY9 Acsm3-204ENSMUST00000106528 2755 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Pcdhb7Q8CDY9 Gm21032-201ENSMUST00000208108 2578 ntBASIC5.08□□□□□ -1.6
Pcdhb7Q8CDY9 Ctps2-204ENSMUST00000112301 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Pcdhb7Q8CDY9 Vcam1-201ENSMUST00000029574 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Pcdhb7Q8CDY9 Gm10635-201ENSMUST00000217201 3721 ntTSL 2 BASIC5.07□□□□□ -1.6
Pcdhb7Q8CDY9 Olfr584-202ENSMUST00000214215 3152 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Pcdhb7Q8CDY9 Gm43913-201ENSMUST00000203924 3029 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Pcdhb7Q8CDY9 Vmn1r124-201ENSMUST00000105200 924 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Pcdhb7Q8CDY9 Gm14560-201ENSMUST00000118672 375 ntBASIC5.07□□□□□ -1.6
Pcdhb7Q8CDY9 Gm14871-201ENSMUST00000119056 194 ntBASIC5.07□□□□□ -1.6
Pcdhb7Q8CDY9 Gm24594-201ENSMUST00000122502 99 ntBASIC5.07□□□□□ -1.6
Pcdhb7Q8CDY9 n-R5s61-201ENSMUST00000122711 118 ntBASIC5.07□□□□□ -1.6
Pcdhb7Q8CDY9 Gm22447-201ENSMUST00000158155 92 ntBASIC5.07□□□□□ -1.6
Pcdhb7Q8CDY9 Gm25223-201ENSMUST00000158200 110 ntBASIC5.07□□□□□ -1.6
Pcdhb7Q8CDY9 Vmn1r103-201ENSMUST00000163461 918 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Pcdhb7Q8CDY9 Vmn1r151-201ENSMUST00000166079 918 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Pcdhb7Q8CDY9 Gm27688-201ENSMUST00000183634 91 ntBASIC5.07□□□□□ -1.6
Pcdhb7Q8CDY9 Ighv1-46-201ENSMUST00000193988 351 ntBASIC5.07□□□□□ -1.6
Pcdhb7Q8CDY9 Ighv1-21-1-201ENSMUST00000195790 351 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 86.4 ms