Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm46194-201ENSMUST00000218136 320 ntBASIC5.38□□□□□ -1.55
Trim47Q8C0E3 Snord14e-201ENSMUST00000082857 90 ntBASIC5.38□□□□□ -1.55
Trim47Q8C0E3 Gm22826-201ENSMUST00000083774 165 ntBASIC5.38□□□□□ -1.55
Trim47Q8C0E3 Olfr827-202ENSMUST00000213568 8457 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Trim47Q8C0E3 Olfr427-202ENSMUST00000213832 3866 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Trim47Q8C0E3 Alg11-201ENSMUST00000072572 4960 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Trim47Q8C0E3 Adgrg2-201ENSMUST00000112398 3418 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Trim47Q8C0E3 Olfr695-201ENSMUST00000216868 3953 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Trim47Q8C0E3 Lin7c-201ENSMUST00000028583 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Trim47Q8C0E3 Olfr1389-202ENSMUST00000216641 3707 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Trim47Q8C0E3 Epha7-201ENSMUST00000029964 6746 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
Trim47Q8C0E3 Gm44668-201ENSMUST00000207911 3265 ntBASIC5.38□□□□□ -1.55
Trim47Q8C0E3 AC167420.1-201ENSMUST00000222999 2121 ntBASIC5.38□□□□□ -1.55
Trim47Q8C0E3 Vmn1r63-201ENSMUST00000075085 2172 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Trim47Q8C0E3 Gm37363-201ENSMUST00000192336 2233 ntBASIC5.38□□□□□ -1.55
Trim47Q8C0E3 Fam71d-205ENSMUST00000219551 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
Trim47Q8C0E3 Pi15-201ENSMUST00000088476 6923 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Trim47Q8C0E3 Ptgs2-201ENSMUST00000035065 4453 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Trim47Q8C0E3 Sult1d1-201ENSMUST00000113314 2420 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Trim47Q8C0E3 Slc6a15-201ENSMUST00000074204 3607 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Trim47Q8C0E3 Mir292-201ENSMUST00000104847 82 ntBASIC5.37□□□□□ -1.55
Trim47Q8C0E3 Gm13491-201ENSMUST00000118267 235 ntBASIC5.37□□□□□ -1.55
Trim47Q8C0E3 Gm13132-201ENSMUST00000121194 472 ntBASIC5.37□□□□□ -1.55
Trim47Q8C0E3 Rpl12-ps2-201ENSMUST00000121298 321 ntBASIC5.37□□□□□ -1.55
Trim47Q8C0E3 Gm22345-201ENSMUST00000122644 107 ntBASIC5.37□□□□□ -1.55
Trim47Q8C0E3 Gm22984-201ENSMUST00000122751 122 ntBASIC5.37□□□□□ -1.55
Trim47Q8C0E3 Gm24931-201ENSMUST00000158324 107 ntBASIC5.37□□□□□ -1.55
Trim47Q8C0E3 Gm24006-201ENSMUST00000158462 132 ntBASIC5.37□□□□□ -1.55
Trim47Q8C0E3 Gm24876-201ENSMUST00000158780 92 ntBASIC5.37□□□□□ -1.55
Trim47Q8C0E3 4930570N18Rik-201ENSMUST00000159273 332 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Trim47Q8C0E3 Gm22118-201ENSMUST00000175593 171 ntBASIC5.37□□□□□ -1.55
Trim47Q8C0E3 Gm11007-201ENSMUST00000177700 195 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Trim47Q8C0E3 Gm2007-201ENSMUST00000177981 195 ntTSL 5 BASIC5.37□□□□□ -1.55
Trim47Q8C0E3 Gm25175-201ENSMUST00000178712 79 ntBASIC5.37□□□□□ -1.55
Trim47Q8C0E3 Gm23922-201ENSMUST00000178792 79 ntBASIC5.37□□□□□ -1.55
Trim47Q8C0E3 Gm24657-201ENSMUST00000180085 79 ntBASIC5.37□□□□□ -1.55
Trim47Q8C0E3 Gm22996-201ENSMUST00000180236 79 ntBASIC5.37□□□□□ -1.55
Trim47Q8C0E3 Mir6344-201ENSMUST00000183462 104 ntBASIC5.37□□□□□ -1.55
Trim47Q8C0E3 Gm29484-201ENSMUST00000186067 324 ntBASIC5.37□□□□□ -1.55
Trim47Q8C0E3 Rnu3a-202ENSMUST00000196710 213 ntBASIC5.37□□□□□ -1.55
Trim47Q8C0E3 Gm44072-201ENSMUST00000203666 383 ntTSL 3 BASIC5.37□□□□□ -1.55
Trim47Q8C0E3 Gm44470-201ENSMUST00000203913 142 ntBASIC5.37□□□□□ -1.55
Trim47Q8C0E3 Gm44657-201ENSMUST00000208568 450 ntBASIC5.37□□□□□ -1.55
Trim47Q8C0E3 Gm18320-201ENSMUST00000211304 595 ntBASIC5.37□□□□□ -1.55
Trim47Q8C0E3 Gm6842-201ENSMUST00000211361 390 ntBASIC5.37□□□□□ -1.55
Trim47Q8C0E3 Calml4-203ENSMUST00000213643 710 ntTSL 2 BASIC5.37□□□□□ -1.55
Trim47Q8C0E3 AC087891.1-201ENSMUST00000217867 318 ntTSL 5 BASIC5.37□□□□□ -1.55
Trim47Q8C0E3 AC151902.2-201ENSMUST00000226419 301 ntBASIC5.37□□□□□ -1.55
Trim47Q8C0E3 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC5.37□□□□□ -1.55
Trim47Q8C0E3 Olfr211-201ENSMUST00000065786 930 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Trim47Q8C0E3 Olfr943-201ENSMUST00000071617 1079 ntAPPRIS P2 TSL 3 BASIC5.37□□□□□ -1.55
Trim47Q8C0E3 Rnu3a-201ENSMUST00000083936 214 ntBASIC5.37□□□□□ -1.55
Trim47Q8C0E3 Trps1-202ENSMUST00000165201 9859 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
Trim47Q8C0E3 Olfr303-204ENSMUST00000215733 3914 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Trim47Q8C0E3 Ccr2-204ENSMUST00000171719 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Trim47Q8C0E3 Il5ra-202ENSMUST00000204659 3575 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Trim47Q8C0E3 Gm14325-201ENSMUST00000108939 1576 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
Trim47Q8C0E3 Ifit2-201ENSMUST00000102826 3818 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Trim47Q8C0E3 Olfr1200-202ENSMUST00000217588 4996 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Trim47Q8C0E3 Olfr1191-ps1-201ENSMUST00000120598 4677 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Trim47Q8C0E3 Abcb11-201ENSMUST00000102709 5025 ntAPPRIS P2 TSL 5 BASIC5.36□□□□□ -1.55
Trim47Q8C0E3 Olfr597-202ENSMUST00000216456 2727 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Trim47Q8C0E3 Gm43085-201ENSMUST00000202859 3132 ntBASIC5.36□□□□□ -1.55
Trim47Q8C0E3 Mtm1-213ENSMUST00000171933 3488 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Trim47Q8C0E3 Gm24124-201ENSMUST00000104103 132 ntBASIC5.36□□□□□ -1.55
Trim47Q8C0E3 Gm22488-201ENSMUST00000116811 127 ntBASIC5.36□□□□□ -1.55
Trim47Q8C0E3 Gm16242-201ENSMUST00000117741 334 ntBASIC5.36□□□□□ -1.55
Trim47Q8C0E3 Gm14706-201ENSMUST00000117744 255 ntBASIC5.36□□□□□ -1.55
Trim47Q8C0E3 Gm15244-201ENSMUST00000121122 130 ntBASIC5.36□□□□□ -1.55
Trim47Q8C0E3 Gm12974-201ENSMUST00000129875 333 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Trim47Q8C0E3 Gm23964-201ENSMUST00000157966 107 ntBASIC5.36□□□□□ -1.55
Trim47Q8C0E3 Mir1947-201ENSMUST00000158235 85 ntBASIC5.36□□□□□ -1.55
Trim47Q8C0E3 Gm25605-201ENSMUST00000158364 124 ntBASIC5.36□□□□□ -1.55
Trim47Q8C0E3 Mir669k-201ENSMUST00000177742 127 ntBASIC5.36□□□□□ -1.55
Trim47Q8C0E3 Gm26337-201ENSMUST00000178000 79 ntBASIC5.36□□□□□ -1.55
Trim47Q8C0E3 Gm24487-201ENSMUST00000178017 63 ntBASIC5.36□□□□□ -1.55
Trim47Q8C0E3 Gm25673-201ENSMUST00000179957 127 ntBASIC5.36□□□□□ -1.55
Trim47Q8C0E3 Rpl31-ps18-201ENSMUST00000180885 377 ntBASIC5.36□□□□□ -1.55
Trim47Q8C0E3 Gm27414-201ENSMUST00000185033 381 ntBASIC5.36□□□□□ -1.55
Trim47Q8C0E3 Gm37732-201ENSMUST00000194377 316 ntBASIC5.36□□□□□ -1.55
Trim47Q8C0E3 Gm36954-201ENSMUST00000195362 363 ntBASIC5.36□□□□□ -1.55
Trim47Q8C0E3 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC5.36□□□□□ -1.55
Trim47Q8C0E3 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC5.36□□□□□ -1.55
Trim47Q8C0E3 Gm42567-201ENSMUST00000199268 352 ntTSL 3 BASIC5.36□□□□□ -1.55
Trim47Q8C0E3 AC192091.2-201ENSMUST00000217869 117 ntBASIC5.36□□□□□ -1.55
Trim47Q8C0E3 Gm23625-201ENSMUST00000082457 100 ntBASIC5.36□□□□□ -1.55
Trim47Q8C0E3 Cd300ld2-201ENSMUST00000092463 381 ntTSL 5 BASIC5.36□□□□□ -1.55
Trim47Q8C0E3 Olfr720-203ENSMUST00000216079 4692 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Trim47Q8C0E3 Mmp16-201ENSMUST00000029881 5011 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Trim47Q8C0E3 Gm37053-201ENSMUST00000192399 2087 ntBASIC5.36□□□□□ -1.55
Trim47Q8C0E3 Gm44860-201ENSMUST00000208473 2346 ntBASIC5.36□□□□□ -1.55
Trim47Q8C0E3 Abcg3-201ENSMUST00000031239 3035 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Trim47Q8C0E3 Gm43527-201ENSMUST00000198749 3178 ntBASIC5.36□□□□□ -1.55
Trim47Q8C0E3 Gm43000-201ENSMUST00000198482 3343 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Trim47Q8C0E3 AC158115.2-201ENSMUST00000221804 5563 ntTSL 5 BASIC5.36□□□□□ -1.55
Trim47Q8C0E3 Gm43696-201ENSMUST00000199385 6071 ntBASIC5.35□□□□□ -1.55
Trim47Q8C0E3 5330434G04Rik-202ENSMUST00000136406 3545 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Trim47Q8C0E3 Gm43185-201ENSMUST00000197507 2775 ntBASIC5.35□□□□□ -1.55
Trim47Q8C0E3 Gm43888-201ENSMUST00000204405 2587 ntBASIC5.35□□□□□ -1.55
Trim47Q8C0E3 Gm9611-201ENSMUST00000100698 231 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 84.5 ms