Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 AC153662.1-201ENSMUST00000222220 270 ntBASIC2.9□□□□□ -1.94
Usp47Q8BY87 AC173481.1-201ENSMUST00000223351 270 ntBASIC2.9□□□□□ -1.94
Usp47Q8BY87 AC140210.1-201ENSMUST00000224961 534 ntBASIC2.9□□□□□ -1.94
Usp47Q8BY87 AC134335.1-201ENSMUST00000227626 329 ntBASIC2.9□□□□□ -1.94
Usp47Q8BY87 Acer3-202ENSMUST00000120520 3964 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
Usp47Q8BY87 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC2.9□□□□□ -1.95
Usp47Q8BY87 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC2.9□□□□□ -1.95
Usp47Q8BY87 Spata31-201ENSMUST00000070216 3232 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Usp47Q8BY87 Klra10-201ENSMUST00000112020 823 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Usp47Q8BY87 Gm5396-201ENSMUST00000121222 532 ntBASIC2.89□□□□□ -1.95
Usp47Q8BY87 n-R5s191-201ENSMUST00000122724 116 ntBASIC2.89□□□□□ -1.95
Usp47Q8BY87 Gm18354-201ENSMUST00000173515 1068 ntBASIC2.89□□□□□ -1.95
Usp47Q8BY87 Gm27898-201ENSMUST00000183987 80 ntBASIC2.89□□□□□ -1.95
Usp47Q8BY87 Gm28191-201ENSMUST00000189112 211 ntBASIC2.89□□□□□ -1.95
Usp47Q8BY87 Gm37219-201ENSMUST00000192036 926 ntBASIC2.89□□□□□ -1.95
Usp47Q8BY87 Gm43316-201ENSMUST00000197252 1295 ntBASIC2.89□□□□□ -1.95
Usp47Q8BY87 Gm17850-201ENSMUST00000210023 1154 ntBASIC2.89□□□□□ -1.95
Usp47Q8BY87 CT009713.6-201ENSMUST00000223615 294 ntBASIC2.89□□□□□ -1.95
Usp47Q8BY87 AC183092.2-201ENSMUST00000225542 1153 ntBASIC2.89□□□□□ -1.95
Usp47Q8BY87 1110015O18Rik-202ENSMUST00000183944 1533 ntTSL 3 BASIC2.89□□□□□ -1.95
Usp47Q8BY87 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Usp47Q8BY87 Gm18300-201ENSMUST00000192792 1406 ntBASIC2.89□□□□□ -1.95
Usp47Q8BY87 Gm37602-201ENSMUST00000195187 3310 ntBASIC2.89□□□□□ -1.95
Usp47Q8BY87 Gm14444-202ENSMUST00000109070 1281 ntAPPRIS P1 TSL 3 BASIC2.88□□□□□ -1.95
Usp47Q8BY87 Cmc4-202ENSMUST00000120286 516 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
Usp47Q8BY87 Mir669n-201ENSMUST00000158636 54 ntBASIC2.88□□□□□ -1.95
Usp47Q8BY87 Gm37479-201ENSMUST00000194169 3841 ntBASIC2.88□□□□□ -1.95
Usp47Q8BY87 Gm43427-201ENSMUST00000198188 331 ntBASIC2.88□□□□□ -1.95
Usp47Q8BY87 Gm20559-201ENSMUST00000201032 433 ntTSL 3 BASIC2.88□□□□□ -1.95
Usp47Q8BY87 Olfr1479-ps1-201ENSMUST00000207752 382 ntBASIC2.88□□□□□ -1.95
Usp47Q8BY87 Gm45296-201ENSMUST00000209625 205 ntBASIC2.88□□□□□ -1.95
Usp47Q8BY87 Gm45654-201ENSMUST00000210980 123 ntBASIC2.88□□□□□ -1.95
Usp47Q8BY87 Gm18015-201ENSMUST00000214879 316 ntBASIC2.88□□□□□ -1.95
Usp47Q8BY87 Olfr746-202ENSMUST00000218546 987 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
Usp47Q8BY87 Gm7214-201ENSMUST00000222428 272 ntBASIC2.88□□□□□ -1.95
Usp47Q8BY87 AC129085.5-201ENSMUST00000225468 400 ntBASIC2.88□□□□□ -1.95
Usp47Q8BY87 Stfa1-201ENSMUST00000042097 418 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
Usp47Q8BY87 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
Usp47Q8BY87 Gm25421-201ENSMUST00000104218 164 ntBASIC2.87□□□□□ -1.95
Usp47Q8BY87 Olfr1288-201ENSMUST00000104889 939 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Usp47Q8BY87 Gm3676-201ENSMUST00000111869 899 ntAPPRIS P1 TSL 3 BASIC2.87□□□□□ -1.95
Usp47Q8BY87 Gm22486-201ENSMUST00000116815 137 ntBASIC2.87□□□□□ -1.95
Usp47Q8BY87 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC2.87□□□□□ -1.95
Usp47Q8BY87 Gm14907-201ENSMUST00000121948 854 ntBASIC2.87□□□□□ -1.95
Usp47Q8BY87 Gm22107-201ENSMUST00000122548 100 ntBASIC2.87□□□□□ -1.95
Usp47Q8BY87 Ear-ps12-201ENSMUST00000161720 451 ntBASIC2.87□□□□□ -1.95
Usp47Q8BY87 Vmn1r224-201ENSMUST00000170076 897 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Usp47Q8BY87 Vmn1r7-201ENSMUST00000176252 1219 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Usp47Q8BY87 1700001F09Rik-201ENSMUST00000178178 884 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
Usp47Q8BY87 Mir7016-201ENSMUST00000184308 72 ntBASIC2.87□□□□□ -1.95
Usp47Q8BY87 Gm28627-201ENSMUST00000186141 453 ntBASIC2.87□□□□□ -1.95
Usp47Q8BY87 Gm17929-201ENSMUST00000186851 627 ntBASIC2.87□□□□□ -1.95
Usp47Q8BY87 4930440C22Rik-202ENSMUST00000190754 512 ntTSL 3 BASIC2.87□□□□□ -1.95
Usp47Q8BY87 AC138401.1-201ENSMUST00000221533 116 ntBASIC2.87□□□□□ -1.95
Usp47Q8BY87 V1ra8-201ENSMUST00000078371 890 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Usp47Q8BY87 1700008P02Rik-201ENSMUST00000091364 783 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
Usp47Q8BY87 Olfr1474-201ENSMUST00000096202 945 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Usp47Q8BY87 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
Usp47Q8BY87 AC154681.1-201ENSMUST00000225876 1735 ntBASIC2.87□□□□□ -1.95
Usp47Q8BY87 Olfr1186-201ENSMUST00000121619 1090 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Usp47Q8BY87 Mir8116-201ENSMUST00000184134 97 ntBASIC2.87□□□□□ -1.95
Usp47Q8BY87 Gm5731-201ENSMUST00000190969 481 ntBASIC2.87□□□□□ -1.95
Usp47Q8BY87 Gm37550-201ENSMUST00000193230 463 ntBASIC2.87□□□□□ -1.95
Usp47Q8BY87 Trbv18-201ENSMUST00000194256 294 ntBASIC2.87□□□□□ -1.95
Usp47Q8BY87 Ighv1-1-201ENSMUST00000194912 291 ntBASIC2.87□□□□□ -1.95
Usp47Q8BY87 Gm37431-201ENSMUST00000195102 111 ntBASIC2.87□□□□□ -1.95
Usp47Q8BY87 Olfr580-ps1-201ENSMUST00000210528 943 ntBASIC2.87□□□□□ -1.95
Usp47Q8BY87 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
Usp47Q8BY87 Mir410-201ENSMUST00000083563 81 ntBASIC2.87□□□□□ -1.95
Usp47Q8BY87 Gm42852-201ENSMUST00000202649 1379 ntBASIC2.86□□□□□ -1.95
Usp47Q8BY87 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
Usp47Q8BY87 Gm42659-201ENSMUST00000196955 1754 ntBASIC2.86□□□□□ -1.95
Usp47Q8BY87 Gm11009-201ENSMUST00000108961 417 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Usp47Q8BY87 Gm15140-201ENSMUST00000112565 984 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
Usp47Q8BY87 Gm13913-201ENSMUST00000121126 260 ntBASIC2.86□□□□□ -1.95
Usp47Q8BY87 Gm12910-201ENSMUST00000135902 724 ntTSL 5 BASIC2.86□□□□□ -1.95
Usp47Q8BY87 Gm20648-201ENSMUST00000175815 328 ntBASIC2.86□□□□□ -1.95
Usp47Q8BY87 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC2.86□□□□□ -1.95
Usp47Q8BY87 4921511M17Rik-201ENSMUST00000177994 984 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
Usp47Q8BY87 Samt1-201ENSMUST00000178342 984 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
Usp47Q8BY87 Samt1-202ENSMUST00000178698 834 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Usp47Q8BY87 4921511M17Rik-202ENSMUST00000179369 834 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Usp47Q8BY87 Gm37021-201ENSMUST00000195835 663 ntTSL 5 BASIC2.86□□□□□ -1.95
Usp47Q8BY87 Eif4e-205ENSMUST00000200100 729 ntTSL 3 BASIC2.86□□□□□ -1.95
Usp47Q8BY87 Gm36520-201ENSMUST00000200449 400 ntTSL 3 BASIC2.86□□□□□ -1.95
Usp47Q8BY87 Gm8249-201ENSMUST00000219225 465 ntBASIC2.86□□□□□ -1.95
Usp47Q8BY87 AC134468.2-201ENSMUST00000222549 672 ntBASIC2.86□□□□□ -1.95
Usp47Q8BY87 Olfr589-201ENSMUST00000061055 954 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
Usp47Q8BY87 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
Usp47Q8BY87 Olfr381-201ENSMUST00000078358 936 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
Usp47Q8BY87 Olfr1256-204ENSMUST00000215613 4543 ntAPPRIS P1 TSL 3 BASIC2.86□□□□□ -1.95
Usp47Q8BY87 Olfr1288-202ENSMUST00000214816 1326 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Usp47Q8BY87 Gm44925-201ENSMUST00000208879 2110 ntBASIC2.85□□□□□ -1.95
Usp47Q8BY87 Olfr1111-203ENSMUST00000216378 1636 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
Usp47Q8BY87 Gm37879-201ENSMUST00000193112 1995 ntBASIC2.85□□□□□ -1.95
Usp47Q8BY87 Gm13614-201ENSMUST00000117306 503 ntBASIC2.85□□□□□ -1.95
Usp47Q8BY87 Gm15760-201ENSMUST00000119553 283 ntBASIC2.85□□□□□ -1.95
Usp47Q8BY87 Gm12213-201ENSMUST00000119924 353 ntBASIC2.85□□□□□ -1.95
Usp47Q8BY87 Ear-ps7-201ENSMUST00000161287 442 ntBASIC2.85□□□□□ -1.95
Usp47Q8BY87 Cfap54-204ENSMUST00000164979 945 ntTSL 5 BASIC2.85□□□□□ -1.95
Retrieved 100 of 76,532 protein–RNA pairs in 83.2 ms