Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm16068-201ENSMUST00000136557 504 ntTSL 3 BASIC5.22□□□□□ -1.57
Usp40Q8BWR4 Gm20399-201ENSMUST00000174652 132 ntBASIC5.22□□□□□ -1.57
Usp40Q8BWR4 D030025E07Rik-205ENSMUST00000198478 418 ntTSL 3 BASIC5.22□□□□□ -1.57
Usp40Q8BWR4 Gm44083-201ENSMUST00000203114 337 ntBASIC5.22□□□□□ -1.57
Usp40Q8BWR4 Gm45368-202ENSMUST00000210944 416 ntTSL 5 BASIC5.22□□□□□ -1.57
Usp40Q8BWR4 Gm45829-201ENSMUST00000212466 334 ntTSL 5 BASIC5.22□□□□□ -1.57
Usp40Q8BWR4 Gm5265-201ENSMUST00000076828 342 ntBASIC5.22□□□□□ -1.57
Usp40Q8BWR4 Gm10287-202ENSMUST00000180599 4059 ntBASIC5.22□□□□□ -1.57
Usp40Q8BWR4 Adam34-201ENSMUST00000110411 2584 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Usp40Q8BWR4 Neat1-201ENSMUST00000173672 20771 ntBASIC5.22□□□□□ -1.57
Usp40Q8BWR4 Fam169a-202ENSMUST00000169863 6013 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Usp40Q8BWR4 Olfr1012-203ENSMUST00000214958 3076 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
Usp40Q8BWR4 Vmn1r80-204ENSMUST00000227471 6368 ntBASIC5.22□□□□□ -1.57
Usp40Q8BWR4 Vmn1r51-207ENSMUST00000227766 4218 ntAPPRIS P1 BASIC5.21□□□□□ -1.57
Usp40Q8BWR4 Tenm1-203ENSMUST00000115059 12879 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.57
Usp40Q8BWR4 Mmp12-201ENSMUST00000005950 3607 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.57
Usp40Q8BWR4 Erbin-207ENSMUST00000191275 5552 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
Usp40Q8BWR4 Olfr1130-201ENSMUST00000213103 2643 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
Usp40Q8BWR4 Olfr1130-202ENSMUST00000216580 2648 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Usp40Q8BWR4 B230334C09Rik-201ENSMUST00000200255 8927 ntBASIC5.21□□□□□ -1.58
Usp40Q8BWR4 Abi3bp-203ENSMUST00000096013 4495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Usp40Q8BWR4 Gm24987-201ENSMUST00000104453 134 ntBASIC5.21□□□□□ -1.58
Usp40Q8BWR4 Scml1-201ENSMUST00000136860 576 ntTSL 3 BASIC5.21□□□□□ -1.58
Usp40Q8BWR4 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Usp40Q8BWR4 Gm22859-201ENSMUST00000174978 122 ntBASIC5.21□□□□□ -1.58
Usp40Q8BWR4 Gm25194-201ENSMUST00000177987 79 ntBASIC5.21□□□□□ -1.58
Usp40Q8BWR4 Rnu6-ps2-201ENSMUST00000178059 107 ntBASIC5.21□□□□□ -1.58
Usp40Q8BWR4 Mir6938-201ENSMUST00000184173 63 ntBASIC5.21□□□□□ -1.58
Usp40Q8BWR4 Gm28654-201ENSMUST00000189801 379 ntBASIC5.21□□□□□ -1.58
Usp40Q8BWR4 Gm29433-201ENSMUST00000191241 253 ntTSL 5 BASIC5.21□□□□□ -1.58
Usp40Q8BWR4 2210017I01Rik-201ENSMUST00000195278 822 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Usp40Q8BWR4 Gm44063-201ENSMUST00000203307 376 ntBASIC5.21□□□□□ -1.58
Usp40Q8BWR4 Gm18194-201ENSMUST00000210455 481 ntBASIC5.21□□□□□ -1.58
Usp40Q8BWR4 Gm45616-201ENSMUST00000211711 319 ntBASIC5.21□□□□□ -1.58
Usp40Q8BWR4 Gm45735-201ENSMUST00000212779 319 ntBASIC5.21□□□□□ -1.58
Usp40Q8BWR4 Gm29674-201ENSMUST00000218791 1139 ntTSL 5 BASIC5.21□□□□□ -1.58
Usp40Q8BWR4 AC153979.1-201ENSMUST00000219684 242 ntTSL 5 BASIC5.21□□□□□ -1.58
Usp40Q8BWR4 Gm9318-201ENSMUST00000222444 438 ntBASIC5.21□□□□□ -1.58
Usp40Q8BWR4 AC154552.1-201ENSMUST00000222969 202 ntBASIC5.21□□□□□ -1.58
Usp40Q8BWR4 Gm25205-201ENSMUST00000082841 103 ntBASIC5.21□□□□□ -1.58
Usp40Q8BWR4 Mir133a-2-201ENSMUST00000083526 104 ntBASIC5.21□□□□□ -1.58
Usp40Q8BWR4 Gm23731-201ENSMUST00000083749 107 ntBASIC5.21□□□□□ -1.58
Usp40Q8BWR4 Olfr124-202ENSMUST00000215168 4497 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Usp40Q8BWR4 Clk1-201ENSMUST00000034868 1796 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Usp40Q8BWR4 Ankrd31-201ENSMUST00000207464 5146 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Usp40Q8BWR4 Themis-202ENSMUST00000060409 2278 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Usp40Q8BWR4 Ccnb3-201ENSMUST00000056725 4475 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Usp40Q8BWR4 A430106G13Rik-201ENSMUST00000182158 3388 ntBASIC5.2□□□□□ -1.58
Usp40Q8BWR4 Gm23322-201ENSMUST00000104464 167 ntBASIC5.2□□□□□ -1.58
Usp40Q8BWR4 Gm12782-201ENSMUST00000117519 727 ntBASIC5.2□□□□□ -1.58
Usp40Q8BWR4 Gm8217-201ENSMUST00000119136 465 ntBASIC5.2□□□□□ -1.58
Usp40Q8BWR4 Gm15212-201ENSMUST00000122403 466 ntBASIC5.2□□□□□ -1.58
Usp40Q8BWR4 Gm24836-201ENSMUST00000122609 108 ntBASIC5.2□□□□□ -1.58
Usp40Q8BWR4 Gm22310-201ENSMUST00000157509 116 ntBASIC5.2□□□□□ -1.58
Usp40Q8BWR4 Gm25425-201ENSMUST00000157611 96 ntBASIC5.2□□□□□ -1.58
Usp40Q8BWR4 Gm24008-201ENSMUST00000157733 138 ntBASIC5.2□□□□□ -1.58
Usp40Q8BWR4 Mir1934-201ENSMUST00000158127 83 ntBASIC5.2□□□□□ -1.58
Usp40Q8BWR4 Gm22646-201ENSMUST00000175130 115 ntBASIC5.2□□□□□ -1.58
Usp40Q8BWR4 Gm4761-201ENSMUST00000178086 582 ntBASIC5.2□□□□□ -1.58
Usp40Q8BWR4 Gm28744-201ENSMUST00000189939 340 ntBASIC5.2□□□□□ -1.58
Usp40Q8BWR4 Rhoay-ps1-201ENSMUST00000191243 581 ntBASIC5.2□□□□□ -1.58
Usp40Q8BWR4 Olfr289-ps1-201ENSMUST00000192834 369 ntBASIC5.2□□□□□ -1.58
Usp40Q8BWR4 Gm37202-201ENSMUST00000193679 361 ntTSL 3 BASIC5.2□□□□□ -1.58
Usp40Q8BWR4 Gm44059-201ENSMUST00000204048 351 ntBASIC5.2□□□□□ -1.58
Usp40Q8BWR4 Gm45498-201ENSMUST00000210346 283 ntBASIC5.2□□□□□ -1.58
Usp40Q8BWR4 Olfr1114-ps1-201ENSMUST00000213896 456 ntBASIC5.2□□□□□ -1.58
Usp40Q8BWR4 CT571268.1-201ENSMUST00000222320 407 ntBASIC5.2□□□□□ -1.58
Usp40Q8BWR4 Defb7-201ENSMUST00000047851 306 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Usp40Q8BWR4 Gm25480-201ENSMUST00000083217 133 ntBASIC5.2□□□□□ -1.58
Usp40Q8BWR4 Slco1a5-201ENSMUST00000081380 2572 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Usp40Q8BWR4 C87499-203ENSMUST00000107143 1431 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
Usp40Q8BWR4 Ogt-201ENSMUST00000044475 5384 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
Usp40Q8BWR4 Pde1a-206ENSMUST00000102655 4258 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Usp40Q8BWR4 Obox1-201ENSMUST00000067288 1512 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Usp40Q8BWR4 Gm29114-201ENSMUST00000187100 2508 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Usp40Q8BWR4 Olfr1404-203ENSMUST00000217374 3686 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Usp40Q8BWR4 Gm25213-201ENSMUST00000102388 113 ntBASIC5.19□□□□□ -1.58
Usp40Q8BWR4 Trav12d-2-201ENSMUST00000103593 341 ntAPPRIS ALT2 BASIC5.19□□□□□ -1.58
Usp40Q8BWR4 Trav12n-2-201ENSMUST00000103619 341 ntAPPRIS ALT2 BASIC5.19□□□□□ -1.58
Usp40Q8BWR4 Gm15382-201ENSMUST00000118011 537 ntBASIC5.19□□□□□ -1.58
Usp40Q8BWR4 Gm11704-201ENSMUST00000120031 214 ntBASIC5.19□□□□□ -1.58
Usp40Q8BWR4 Gm15177-201ENSMUST00000120491 577 ntBASIC5.19□□□□□ -1.58
Usp40Q8BWR4 Gm16005-201ENSMUST00000120515 269 ntBASIC5.19□□□□□ -1.58
Usp40Q8BWR4 Gm6079-201ENSMUST00000121356 404 ntBASIC5.19□□□□□ -1.58
Usp40Q8BWR4 4930555B12Rik-201ENSMUST00000135444 283 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Usp40Q8BWR4 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Usp40Q8BWR4 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC5.19□□□□□ -1.58
Usp40Q8BWR4 Mir3070b-201ENSMUST00000175205 89 ntBASIC5.19□□□□□ -1.58
Usp40Q8BWR4 Gm27903-201ENSMUST00000175482 126 ntBASIC5.19□□□□□ -1.58
Usp40Q8BWR4 Gm23191-201ENSMUST00000179147 107 ntBASIC5.19□□□□□ -1.58
Usp40Q8BWR4 Gm10717-208ENSMUST00000179839 681 ntTSL 5 BASIC5.19□□□□□ -1.58
Usp40Q8BWR4 Gm10717-209ENSMUST00000179982 681 ntTSL 5 BASIC5.19□□□□□ -1.58
Usp40Q8BWR4 Gm28717-201ENSMUST00000189950 315 ntBASIC5.19□□□□□ -1.58
Usp40Q8BWR4 Mug-ps1-203ENSMUST00000190643 655 ntTSL 3 BASIC5.19□□□□□ -1.58
Usp40Q8BWR4 Gm18403-201ENSMUST00000192907 529 ntBASIC5.19□□□□□ -1.58
Usp40Q8BWR4 Gm43739-201ENSMUST00000198294 307 ntBASIC5.19□□□□□ -1.58
Usp40Q8BWR4 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC5.19□□□□□ -1.58
Usp40Q8BWR4 Gm8249-201ENSMUST00000219225 465 ntBASIC5.19□□□□□ -1.58
Usp40Q8BWR4 CT025536.1-201ENSMUST00000226744 844 ntBASIC5.19□□□□□ -1.58
Usp40Q8BWR4 Gm22229-201ENSMUST00000082987 108 ntBASIC5.19□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms