Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 AC118639.1-204ENSMUST00000226401 694 ntBASIC3.16□□□□□ -1.9
Ccdc40Q8BI79 Ly96-201ENSMUST00000026881 632 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Ccdc40Q8BI79 Gm9845-201ENSMUST00000056409 598 ntBASIC3.16□□□□□ -1.9
Ccdc40Q8BI79 Olfr561-201ENSMUST00000098217 1071 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Ccdc40Q8BI79 Btbd35f3-201ENSMUST00000140300 1943 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Ccdc40Q8BI79 AC104897.1-201ENSMUST00000222638 3628 ntBASIC3.16□□□□□ -1.9
Ccdc40Q8BI79 Krtap24-1-201ENSMUST00000052512 1571 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Ccdc40Q8BI79 Ccdc18-201ENSMUST00000047677 5336 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Ccdc40Q8BI79 Gm43379-201ENSMUST00000196253 7726 ntBASIC3.16□□□□□ -1.9
Ccdc40Q8BI79 Gm42684-201ENSMUST00000197663 3615 ntBASIC3.15□□□□□ -1.9
Ccdc40Q8BI79 Gpr174-203ENSMUST00000118820 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
Ccdc40Q8BI79 Olfr1161-202ENSMUST00000214438 3675 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
Ccdc40Q8BI79 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.9
Ccdc40Q8BI79 Gm24118-201ENSMUST00000103972 126 ntBASIC3.15□□□□□ -1.91
Ccdc40Q8BI79 Gm14448-201ENSMUST00000116383 210 ntBASIC3.15□□□□□ -1.91
Ccdc40Q8BI79 Gm25292-201ENSMUST00000122797 322 ntBASIC3.15□□□□□ -1.91
Ccdc40Q8BI79 Vmn2r-ps76-201ENSMUST00000173876 739 ntBASIC3.15□□□□□ -1.91
Ccdc40Q8BI79 Gm20673-201ENSMUST00000177167 430 ntBASIC3.15□□□□□ -1.91
Ccdc40Q8BI79 Gm26844-201ENSMUST00000181690 673 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Ccdc40Q8BI79 Ranbp2-ps12-201ENSMUST00000197110 386 ntBASIC3.15□□□□□ -1.91
Ccdc40Q8BI79 Gm43619-201ENSMUST00000197267 914 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Ccdc40Q8BI79 Olfr278-ps1-201ENSMUST00000205676 238 ntBASIC3.15□□□□□ -1.91
Ccdc40Q8BI79 AC120540.1-201ENSMUST00000221879 324 ntBASIC3.15□□□□□ -1.91
Ccdc40Q8BI79 AC127371.1-202ENSMUST00000228923 306 ntBASIC3.15□□□□□ -1.91
Ccdc40Q8BI79 Spata45-201ENSMUST00000077889 432 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
Ccdc40Q8BI79 Olfr1099-201ENSMUST00000099871 1031 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Ccdc40Q8BI79 Gm44625-201ENSMUST00000207838 1561 ntBASIC3.15□□□□□ -1.91
Ccdc40Q8BI79 Olfr1051-202ENSMUST00000216432 2807 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Ccdc40Q8BI79 Olfr1051-203ENSMUST00000217245 2821 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Ccdc40Q8BI79 Gm15975-201ENSMUST00000122385 1402 ntBASIC3.14□□□□□ -1.91
Ccdc40Q8BI79 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC3.14□□□□□ -1.91
Ccdc40Q8BI79 Gm15103-201ENSMUST00000119893 871 ntBASIC3.14□□□□□ -1.91
Ccdc40Q8BI79 Gm12876-201ENSMUST00000120975 408 ntBASIC3.14□□□□□ -1.91
Ccdc40Q8BI79 Gm15381-201ENSMUST00000121501 1156 ntBASIC3.14□□□□□ -1.91
Ccdc40Q8BI79 Gm13555-201ENSMUST00000121668 319 ntBASIC3.14□□□□□ -1.91
Ccdc40Q8BI79 Gm7209-201ENSMUST00000122339 333 ntBASIC3.14□□□□□ -1.91
Ccdc40Q8BI79 Gm13274-202ENSMUST00000137624 271 ntTSL 3 BASIC3.14□□□□□ -1.91
Ccdc40Q8BI79 Gm26101-201ENSMUST00000157246 105 ntBASIC3.14□□□□□ -1.91
Ccdc40Q8BI79 Gm16117-201ENSMUST00000160544 324 ntTSL 5 BASIC3.14□□□□□ -1.91
Ccdc40Q8BI79 Vmn1r14-201ENSMUST00000177435 912 ntAPPRIS P2 BASIC3.14□□□□□ -1.91
Ccdc40Q8BI79 Mir6402-201ENSMUST00000183406 80 ntBASIC3.14□□□□□ -1.91
Ccdc40Q8BI79 Mir8118-201ENSMUST00000183962 129 ntBASIC3.14□□□□□ -1.91
Ccdc40Q8BI79 Ighv3-7-201ENSMUST00000193370 348 ntBASIC3.14□□□□□ -1.91
Ccdc40Q8BI79 Gm34732-201ENSMUST00000195441 445 ntTSL 3 BASIC3.14□□□□□ -1.91
Ccdc40Q8BI79 Gm42818-201ENSMUST00000198869 987 ntBASIC3.14□□□□□ -1.91
Ccdc40Q8BI79 Gm43746-201ENSMUST00000200028 317 ntBASIC3.14□□□□□ -1.91
Ccdc40Q8BI79 Gm43500-201ENSMUST00000201067 312 ntTSL 5 BASIC3.14□□□□□ -1.91
Ccdc40Q8BI79 2900060B14Rik-201ENSMUST00000203191 616 ntBASIC3.14□□□□□ -1.91
Ccdc40Q8BI79 Gm17850-201ENSMUST00000210023 1154 ntBASIC3.14□□□□□ -1.91
Ccdc40Q8BI79 Gm45400-201ENSMUST00000211603 653 ntBASIC3.14□□□□□ -1.91
Ccdc40Q8BI79 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Ccdc40Q8BI79 AC166113.1-201ENSMUST00000225258 475 ntBASIC3.14□□□□□ -1.91
Ccdc40Q8BI79 AC154262.1-201ENSMUST00000225976 286 ntBASIC3.14□□□□□ -1.91
Ccdc40Q8BI79 Pmch-201ENSMUST00000048621 749 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Ccdc40Q8BI79 Olfr1369-ps1-202ENSMUST00000213326 3707 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Ccdc40Q8BI79 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Ccdc40Q8BI79 Olfr58-202ENSMUST00000215112 2454 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
Ccdc40Q8BI79 Gm13627-201ENSMUST00000119700 706 ntBASIC3.13□□□□□ -1.91
Ccdc40Q8BI79 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC3.13□□□□□ -1.91
Ccdc40Q8BI79 Crem-231ENSMUST00000152108 654 ntTSL 5 BASIC3.13□□□□□ -1.91
Ccdc40Q8BI79 Gm24730-201ENSMUST00000158228 117 ntBASIC3.13□□□□□ -1.91
Ccdc40Q8BI79 Gm24553-201ENSMUST00000158653 131 ntBASIC3.13□□□□□ -1.91
Ccdc40Q8BI79 Vmn2r-ps58-201ENSMUST00000173044 242 ntBASIC3.13□□□□□ -1.91
Ccdc40Q8BI79 Gm26297-201ENSMUST00000179464 132 ntBASIC3.13□□□□□ -1.91
Ccdc40Q8BI79 Gm7329-201ENSMUST00000185915 210 ntBASIC3.13□□□□□ -1.91
Ccdc40Q8BI79 Gm28779-201ENSMUST00000189678 323 ntBASIC3.13□□□□□ -1.91
Ccdc40Q8BI79 Gm17916-203ENSMUST00000189918 324 ntTSL 5 BASIC3.13□□□□□ -1.91
Ccdc40Q8BI79 Igkv2-105-201ENSMUST00000196931 377 ntBASIC3.13□□□□□ -1.91
Ccdc40Q8BI79 Gm44041-201ENSMUST00000203678 396 ntBASIC3.13□□□□□ -1.91
Ccdc40Q8BI79 4930528H21Rik-201ENSMUST00000204264 495 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Ccdc40Q8BI79 Gm44600-201ENSMUST00000208540 111 ntBASIC3.13□□□□□ -1.91
Ccdc40Q8BI79 Gm45439-201ENSMUST00000211723 359 ntBASIC3.13□□□□□ -1.91
Ccdc40Q8BI79 Gm7422-201ENSMUST00000220115 640 ntBASIC3.13□□□□□ -1.91
Ccdc40Q8BI79 Gm5265-201ENSMUST00000076828 342 ntBASIC3.13□□□□□ -1.91
Ccdc40Q8BI79 Olfr295-201ENSMUST00000078447 930 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Ccdc40Q8BI79 Olfr814-201ENSMUST00000081367 933 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Ccdc40Q8BI79 Gm25202-201ENSMUST00000082838 191 ntBASIC3.13□□□□□ -1.91
Ccdc40Q8BI79 Gm43300-201ENSMUST00000198540 2043 ntBASIC3.13□□□□□ -1.91
Ccdc40Q8BI79 Olfr1256-203ENSMUST00000213833 6081 ntAPPRIS P1 TSL 3 BASIC3.13□□□□□ -1.91
Ccdc40Q8BI79 Olfr1487-204ENSMUST00000216688 2038 ntTSL 5 BASIC3.13□□□□□ -1.91
Ccdc40Q8BI79 Vmn1r13-203ENSMUST00000227298 5203 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Ccdc40Q8BI79 Gm7869-201ENSMUST00000121457 1322 ntBASIC3.13□□□□□ -1.91
Ccdc40Q8BI79 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Ccdc40Q8BI79 Olfr1234-203ENSMUST00000137692 3827 ntAPPRIS P1 TSL 3 BASIC3.13□□□□□ -1.91
Ccdc40Q8BI79 AC164164.1-201ENSMUST00000223245 2340 ntBASIC3.13□□□□□ -1.91
Ccdc40Q8BI79 Zfp946-204ENSMUST00000167740 1572 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Ccdc40Q8BI79 Gm44049-201ENSMUST00000204905 2984 ntBASIC3.12□□□□□ -1.91
Ccdc40Q8BI79 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
Ccdc40Q8BI79 Gm43896-201ENSMUST00000203440 2032 ntBASIC3.12□□□□□ -1.91
Ccdc40Q8BI79 Sult2a8-203ENSMUST00000168252 2097 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Ccdc40Q8BI79 Sycp3-203ENSMUST00000125612 1169 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
Ccdc40Q8BI79 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC3.12□□□□□ -1.91
Ccdc40Q8BI79 B230216N24Rik-202ENSMUST00000159353 345 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Ccdc40Q8BI79 Vmn1r-ps61-201ENSMUST00000173771 822 ntBASIC3.12□□□□□ -1.91
Ccdc40Q8BI79 Gm28072-202ENSMUST00000190486 352 ntTSL 5 BASIC3.12□□□□□ -1.91
Ccdc40Q8BI79 Gm37692-201ENSMUST00000192633 232 ntBASIC3.12□□□□□ -1.91
Ccdc40Q8BI79 Ighv1-40-201ENSMUST00000194231 345 ntBASIC3.12□□□□□ -1.91
Ccdc40Q8BI79 Gm43355-201ENSMUST00000196541 346 ntBASIC3.12□□□□□ -1.91
Ccdc40Q8BI79 4930595L18Rik-201ENSMUST00000204069 506 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Ccdc40Q8BI79 Gm45395-201ENSMUST00000209891 559 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 10.6 ms