Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Gm12902-201ENSMUST00000118389 322 ntBASIC4□□□□□ -1.77
Rnf220Q6PDX6 Gm13687-201ENSMUST00000119857 282 ntBASIC4□□□□□ -1.77
Rnf220Q6PDX6 Gm12837-201ENSMUST00000120131 373 ntBASIC4□□□□□ -1.77
Rnf220Q6PDX6 Gm14287-201ENSMUST00000121060 117 ntBASIC4□□□□□ -1.77
Rnf220Q6PDX6 Gm13868-201ENSMUST00000122411 294 ntBASIC4□□□□□ -1.77
Rnf220Q6PDX6 Gm8840-201ENSMUST00000122454 386 ntBASIC4□□□□□ -1.77
Rnf220Q6PDX6 Gm22534-201ENSMUST00000158173 104 ntBASIC4□□□□□ -1.77
Rnf220Q6PDX6 Gm25923-201ENSMUST00000158312 138 ntBASIC4□□□□□ -1.77
Rnf220Q6PDX6 Gm22891-201ENSMUST00000158641 164 ntBASIC4□□□□□ -1.77
Rnf220Q6PDX6 Gm22668-201ENSMUST00000158716 260 ntBASIC4□□□□□ -1.77
Rnf220Q6PDX6 Gm21776-201ENSMUST00000177676 1083 ntAPPRIS P1 BASIC4□□□□□ -1.77
Rnf220Q6PDX6 Gm23660-201ENSMUST00000178362 79 ntBASIC4□□□□□ -1.77
Rnf220Q6PDX6 Gm24088-201ENSMUST00000179100 79 ntBASIC4□□□□□ -1.77
Rnf220Q6PDX6 Gm21850-201ENSMUST00000179792 359 ntBASIC4□□□□□ -1.77
Rnf220Q6PDX6 Gm21913-201ENSMUST00000179880 1083 ntAPPRIS P1 BASIC4□□□□□ -1.77
Rnf220Q6PDX6 Gm4854-201ENSMUST00000185902 574 ntBASIC4□□□□□ -1.77
Rnf220Q6PDX6 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC4□□□□□ -1.77
Rnf220Q6PDX6 Gm30097-201ENSMUST00000193581 447 ntTSL 5 BASIC4□□□□□ -1.77
Rnf220Q6PDX6 Gm29704-201ENSMUST00000196011 253 ntBASIC4□□□□□ -1.77
Rnf220Q6PDX6 Rps27-206ENSMUST00000197361 329 ntTSL 3 BASIC4□□□□□ -1.77
Rnf220Q6PDX6 Gm42526-201ENSMUST00000198956 393 ntBASIC4□□□□□ -1.77
Rnf220Q6PDX6 4930500F04Rik-202ENSMUST00000202156 251 ntTSL 3 BASIC4□□□□□ -1.77
Rnf220Q6PDX6 Gm10445-201ENSMUST00000203521 762 ntTSL 2 BASIC4□□□□□ -1.77
Rnf220Q6PDX6 Gm43955-201ENSMUST00000204332 142 ntBASIC4□□□□□ -1.77
Rnf220Q6PDX6 AC158803.1-201ENSMUST00000219495 316 ntBASIC4□□□□□ -1.77
Rnf220Q6PDX6 Gm46190-201ENSMUST00000219650 427 ntBASIC4□□□□□ -1.77
Rnf220Q6PDX6 n-R5s173-201ENSMUST00000082620 119 ntBASIC4□□□□□ -1.77
Rnf220Q6PDX6 Nlrp4c-201ENSMUST00000037728 3615 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Rnf220Q6PDX6 Gm43870-201ENSMUST00000205102 4369 ntBASIC4□□□□□ -1.77
Rnf220Q6PDX6 Gm37916-201ENSMUST00000192153 2435 ntBASIC4□□□□□ -1.77
Rnf220Q6PDX6 Vmn2r-ps49-201ENSMUST00000173160 3551 ntBASIC3.99□□□□□ -1.77
Rnf220Q6PDX6 Btbd35f12-201ENSMUST00000178827 1908 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Rnf220Q6PDX6 Olfr1196-203ENSMUST00000216977 4225 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Rnf220Q6PDX6 Gm2042-207ENSMUST00000181326 2440 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
Rnf220Q6PDX6 Hdx-201ENSMUST00000038472 9385 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Rnf220Q6PDX6 Lrif1-201ENSMUST00000098750 3103 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Rnf220Q6PDX6 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Rnf220Q6PDX6 Gm3443-201ENSMUST00000112772 285 ntAPPRIS P1 TSL 3 BASIC3.99□□□□□ -1.77
Rnf220Q6PDX6 Gm5483-201ENSMUST00000114858 414 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Rnf220Q6PDX6 Gm13085-201ENSMUST00000118356 171 ntBASIC3.99□□□□□ -1.77
Rnf220Q6PDX6 Gm13510-201ENSMUST00000118659 429 ntBASIC3.99□□□□□ -1.77
Rnf220Q6PDX6 Cyp4b1-ps1-201ENSMUST00000118753 315 ntBASIC3.99□□□□□ -1.77
Rnf220Q6PDX6 Gm11606-201ENSMUST00000120706 617 ntBASIC3.99□□□□□ -1.77
Rnf220Q6PDX6 Gm23231-201ENSMUST00000157299 104 ntBASIC3.99□□□□□ -1.77
Rnf220Q6PDX6 Gm24739-201ENSMUST00000158855 292 ntBASIC3.99□□□□□ -1.77
Rnf220Q6PDX6 Arhgap39-209ENSMUST00000177026 371 ntTSL 5 BASIC3.99□□□□□ -1.77
Rnf220Q6PDX6 Gm27165-201ENSMUST00000183951 232 ntBASIC3.99□□□□□ -1.77
Rnf220Q6PDX6 4930553J12Rik-202ENSMUST00000187823 851 ntBASIC3.99□□□□□ -1.77
Rnf220Q6PDX6 Gm28061-201ENSMUST00000189085 807 ntBASIC3.99□□□□□ -1.77
Rnf220Q6PDX6 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Rnf220Q6PDX6 Gm29185-201ENSMUST00000190578 516 ntTSL 5 BASIC3.99□□□□□ -1.77
Rnf220Q6PDX6 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC3.99□□□□□ -1.77
Rnf220Q6PDX6 Gm44474-201ENSMUST00000196525 127 ntBASIC3.99□□□□□ -1.77
Rnf220Q6PDX6 Hcfc1r1-ps2-201ENSMUST00000199379 339 ntBASIC3.99□□□□□ -1.77
Rnf220Q6PDX6 Gm43730-201ENSMUST00000199863 372 ntBASIC3.99□□□□□ -1.77
Rnf220Q6PDX6 Gm45857-201ENSMUST00000212207 356 ntBASIC3.99□□□□□ -1.77
Rnf220Q6PDX6 Gm8942-201ENSMUST00000217892 400 ntBASIC3.99□□□□□ -1.77
Rnf220Q6PDX6 Vmn2r-ps104-201ENSMUST00000099416 1671 ntTSL 5 BASIC3.99□□□□□ -1.77
Rnf220Q6PDX6 Oog1-203ENSMUST00000222332 1464 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
Rnf220Q6PDX6 Gm45848-201ENSMUST00000212932 1871 ntTSL 5 BASIC3.98□□□□□ -1.77
Rnf220Q6PDX6 Olfr270-203ENSMUST00000215010 2502 ntAPPRIS ALT1 TSL 5 BASIC3.98□□□□□ -1.77
Rnf220Q6PDX6 Olfr112-201ENSMUST00000085548 3103 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Rnf220Q6PDX6 Olfr1313-202ENSMUST00000213577 2588 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Rnf220Q6PDX6 Gm37764-201ENSMUST00000194664 2150 ntBASIC3.98□□□□□ -1.77
Rnf220Q6PDX6 Gm38152-201ENSMUST00000195389 3566 ntBASIC3.98□□□□□ -1.77
Rnf220Q6PDX6 Gm25096-201ENSMUST00000104043 129 ntBASIC3.98□□□□□ -1.77
Rnf220Q6PDX6 Gm22021-201ENSMUST00000104353 107 ntBASIC3.98□□□□□ -1.77
Rnf220Q6PDX6 Mir743b-201ENSMUST00000104751 77 ntBASIC3.98□□□□□ -1.77
Rnf220Q6PDX6 Gm11859-201ENSMUST00000118099 455 ntBASIC3.98□□□□□ -1.77
Rnf220Q6PDX6 Gm6274-201ENSMUST00000118173 797 ntBASIC3.98□□□□□ -1.77
Rnf220Q6PDX6 Defa-ps15-201ENSMUST00000118178 477 ntBASIC3.98□□□□□ -1.77
Rnf220Q6PDX6 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC3.98□□□□□ -1.77
Rnf220Q6PDX6 Gm11456-201ENSMUST00000121070 256 ntBASIC3.98□□□□□ -1.77
Rnf220Q6PDX6 Gm14972-201ENSMUST00000121780 364 ntBASIC3.98□□□□□ -1.77
Rnf220Q6PDX6 Gm7840-201ENSMUST00000122086 533 ntBASIC3.98□□□□□ -1.77
Rnf220Q6PDX6 Gm12272-201ENSMUST00000138136 333 ntTSL 5 BASIC3.98□□□□□ -1.77
Rnf220Q6PDX6 Gm11376-201ENSMUST00000144541 231 ntTSL 5 BASIC3.98□□□□□ -1.77
Rnf220Q6PDX6 Gm15340-201ENSMUST00000144984 704 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Rnf220Q6PDX6 Gm24251-201ENSMUST00000157324 114 ntBASIC3.98□□□□□ -1.77
Rnf220Q6PDX6 Gm24217-201ENSMUST00000158260 133 ntBASIC3.98□□□□□ -1.77
Rnf220Q6PDX6 Gm22611-201ENSMUST00000158288 150 ntBASIC3.98□□□□□ -1.77
Rnf220Q6PDX6 Gm24499-201ENSMUST00000158446 104 ntBASIC3.98□□□□□ -1.77
Rnf220Q6PDX6 Ear10-201ENSMUST00000159175 678 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Rnf220Q6PDX6 Slc9c1-201ENSMUST00000159945 3836 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Rnf220Q6PDX6 Gm7335-201ENSMUST00000172475 373 ntBASIC3.98□□□□□ -1.77
Rnf220Q6PDX6 Gm29596-201ENSMUST00000185710 385 ntBASIC3.98□□□□□ -1.77
Rnf220Q6PDX6 Gm29429-201ENSMUST00000187071 121 ntBASIC3.98□□□□□ -1.77
Rnf220Q6PDX6 Gm28267-201ENSMUST00000191093 265 ntBASIC3.98□□□□□ -1.77
Rnf220Q6PDX6 Gm7041-201ENSMUST00000201227 524 ntBASIC3.98□□□□□ -1.77
Rnf220Q6PDX6 Gm43101-202ENSMUST00000201733 488 ntTSL 2 BASIC3.98□□□□□ -1.77
Rnf220Q6PDX6 Gm44030-201ENSMUST00000204865 432 ntBASIC3.98□□□□□ -1.77
Rnf220Q6PDX6 Gm44825-201ENSMUST00000207557 150 ntBASIC3.98□□□□□ -1.77
Rnf220Q6PDX6 Gm44598-201ENSMUST00000207566 150 ntBASIC3.98□□□□□ -1.77
Rnf220Q6PDX6 Gm44657-201ENSMUST00000208568 450 ntBASIC3.98□□□□□ -1.77
Rnf220Q6PDX6 AC138284.5-201ENSMUST00000214389 652 ntBASIC3.98□□□□□ -1.77
Rnf220Q6PDX6 AC140785.1-201ENSMUST00000217782 383 ntBASIC3.98□□□□□ -1.77
Rnf220Q6PDX6 AC140477.1-201ENSMUST00000222354 246 ntBASIC3.98□□□□□ -1.77
Rnf220Q6PDX6 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC3.98□□□□□ -1.77
Rnf220Q6PDX6 AC158395.1-201ENSMUST00000227206 452 ntBASIC3.98□□□□□ -1.77
Rnf220Q6PDX6 Olfr914-201ENSMUST00000057755 951 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 89.6 ms