Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Mir682-201ENSMUST00000102281 96 ntBASIC2.72□□□□□ -1.97
Upf3bQ3ULL6 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC2.72□□□□□ -1.97
Upf3bQ3ULL6 Gm13329-201ENSMUST00000117063 265 ntBASIC2.72□□□□□ -1.97
Upf3bQ3ULL6 Gm12617-201ENSMUST00000121268 381 ntBASIC2.72□□□□□ -1.97
Upf3bQ3ULL6 Gm22960-201ENSMUST00000122517 104 ntBASIC2.72□□□□□ -1.97
Upf3bQ3ULL6 Gm12023-201ENSMUST00000145182 520 ntTSL 5 BASIC2.72□□□□□ -1.97
Upf3bQ3ULL6 Gm24475-201ENSMUST00000157435 143 ntBASIC2.72□□□□□ -1.97
Upf3bQ3ULL6 Gm23391-201ENSMUST00000157579 104 ntBASIC2.72□□□□□ -1.97
Upf3bQ3ULL6 Gm24436-201ENSMUST00000157889 302 ntBASIC2.72□□□□□ -1.97
Upf3bQ3ULL6 Gm16232-201ENSMUST00000162856 167 ntBASIC2.72□□□□□ -1.97
Upf3bQ3ULL6 Gm7247-201ENSMUST00000162998 1157 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
Upf3bQ3ULL6 Gm15564-202ENSMUST00000173605 402 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
Upf3bQ3ULL6 Gm8220-203ENSMUST00000177877 381 ntTSL 5 BASIC2.72□□□□□ -1.97
Upf3bQ3ULL6 Gm27522-201ENSMUST00000183949 230 ntBASIC2.72□□□□□ -1.97
Upf3bQ3ULL6 Ranbp2-ps9-201ENSMUST00000184566 382 ntBASIC2.72□□□□□ -1.97
Upf3bQ3ULL6 Gm27715-201ENSMUST00000184714 260 ntBASIC2.72□□□□□ -1.97
Upf3bQ3ULL6 Gm7634-201ENSMUST00000185778 553 ntBASIC2.72□□□□□ -1.97
Upf3bQ3ULL6 Mrgprb1-203ENSMUST00000188918 435 ntTSL 3 BASIC2.72□□□□□ -1.97
Upf3bQ3ULL6 Ighv1-6-201ENSMUST00000193849 293 ntBASIC2.72□□□□□ -1.97
Upf3bQ3ULL6 Gm43500-201ENSMUST00000201067 312 ntTSL 5 BASIC2.72□□□□□ -1.97
Upf3bQ3ULL6 Gm45678-201ENSMUST00000210509 295 ntBASIC2.72□□□□□ -1.97
Upf3bQ3ULL6 Olfr850-202ENSMUST00000211832 947 ntAPPRIS ALT2 BASIC2.72□□□□□ -1.97
Upf3bQ3ULL6 Olfr1135-202ENSMUST00000213835 2648 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
Upf3bQ3ULL6 4930448F12Rik-201ENSMUST00000220795 859 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
Upf3bQ3ULL6 AC154828.2-201ENSMUST00000220908 1070 ntBASIC2.72□□□□□ -1.97
Upf3bQ3ULL6 AC154636.3-201ENSMUST00000221489 1214 ntBASIC2.72□□□□□ -1.97
Upf3bQ3ULL6 4930455B14Rik-203ENSMUST00000223613 640 ntBASIC2.72□□□□□ -1.97
Upf3bQ3ULL6 AC122418.1-201ENSMUST00000225012 511 ntBASIC2.72□□□□□ -1.97
Upf3bQ3ULL6 AC125523.1-201ENSMUST00000228018 934 ntBASIC2.72□□□□□ -1.97
Upf3bQ3ULL6 Olfr478-201ENSMUST00000049719 945 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
Upf3bQ3ULL6 Olfr1048-201ENSMUST00000099900 963 ntAPPRIS P2 BASIC2.72□□□□□ -1.97
Upf3bQ3ULL6 Gm42736-201ENSMUST00000200723 1353 ntBASIC2.72□□□□□ -1.97
Upf3bQ3ULL6 Gm44897-201ENSMUST00000206187 1341 ntBASIC2.71□□□□□ -1.98
Upf3bQ3ULL6 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC2.71□□□□□ -1.98
Upf3bQ3ULL6 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
Upf3bQ3ULL6 Olfr774-202ENSMUST00000203248 1429 ntAPPRIS P1 TSL 3 BASIC2.71□□□□□ -1.98
Upf3bQ3ULL6 Gm23577-201ENSMUST00000103950 110 ntBASIC2.71□□□□□ -1.98
Upf3bQ3ULL6 Gm25168-201ENSMUST00000104189 132 ntBASIC2.71□□□□□ -1.98
Upf3bQ3ULL6 Gm22658-201ENSMUST00000104196 155 ntBASIC2.71□□□□□ -1.98
Upf3bQ3ULL6 Gm14159-201ENSMUST00000119832 451 ntBASIC2.71□□□□□ -1.98
Upf3bQ3ULL6 Gm14069-201ENSMUST00000120815 229 ntBASIC2.71□□□□□ -1.98
Upf3bQ3ULL6 Gm14821-201ENSMUST00000121975 435 ntBASIC2.71□□□□□ -1.98
Upf3bQ3ULL6 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC2.71□□□□□ -1.98
Upf3bQ3ULL6 Gm3104-201ENSMUST00000171004 473 ntBASIC2.71□□□□□ -1.98
Upf3bQ3ULL6 Gm5967-201ENSMUST00000172723 494 ntBASIC2.71□□□□□ -1.98
Upf3bQ3ULL6 Gm21883-201ENSMUST00000179028 372 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
Upf3bQ3ULL6 Olfr421-ps1-201ENSMUST00000179386 1050 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
Upf3bQ3ULL6 Gm21789-201ENSMUST00000179547 372 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
Upf3bQ3ULL6 Gm37850-201ENSMUST00000194573 549 ntTSL 5 BASIC2.71□□□□□ -1.98
Upf3bQ3ULL6 Olfr428-ps1-201ENSMUST00000201135 466 ntBASIC2.71□□□□□ -1.98
Upf3bQ3ULL6 Gm43991-201ENSMUST00000203751 274 ntBASIC2.71□□□□□ -1.98
Upf3bQ3ULL6 Gm43994-201ENSMUST00000203809 227 ntTSL 5 BASIC2.71□□□□□ -1.98
Upf3bQ3ULL6 Olfr752-ps1-201ENSMUST00000208736 1141 ntBASIC2.71□□□□□ -1.98
Upf3bQ3ULL6 Olfr500-ps1-201ENSMUST00000208818 933 ntBASIC2.71□□□□□ -1.98
Upf3bQ3ULL6 CAAA01216754.4-202ENSMUST00000215276 610 ntBASIC2.71□□□□□ -1.98
Upf3bQ3ULL6 AC159242.1-201ENSMUST00000225832 194 ntBASIC2.71□□□□□ -1.98
Upf3bQ3ULL6 AC101945.3-201ENSMUST00000226568 153 ntBASIC2.71□□□□□ -1.98
Upf3bQ3ULL6 Olfr914-201ENSMUST00000057755 951 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
Upf3bQ3ULL6 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
Upf3bQ3ULL6 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
Upf3bQ3ULL6 Gm6913-201ENSMUST00000100019 348 ntBASIC2.7□□□□□ -1.98
Upf3bQ3ULL6 Gm10486-201ENSMUST00000101647 924 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
Upf3bQ3ULL6 Mir344c-201ENSMUST00000103919 92 ntBASIC2.7□□□□□ -1.98
Upf3bQ3ULL6 Gm24120-201ENSMUST00000103978 129 ntBASIC2.7□□□□□ -1.98
Upf3bQ3ULL6 Gm24670-201ENSMUST00000104154 132 ntBASIC2.7□□□□□ -1.98
Upf3bQ3ULL6 Gm22486-201ENSMUST00000116815 137 ntBASIC2.7□□□□□ -1.98
Upf3bQ3ULL6 Gm13731-201ENSMUST00000117332 196 ntBASIC2.7□□□□□ -1.98
Upf3bQ3ULL6 Gm11943-201ENSMUST00000119473 327 ntBASIC2.7□□□□□ -1.98
Upf3bQ3ULL6 Gm6574-201ENSMUST00000120037 362 ntBASIC2.7□□□□□ -1.98
Upf3bQ3ULL6 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC2.7□□□□□ -1.98
Upf3bQ3ULL6 Gm23600-201ENSMUST00000157260 71 ntBASIC2.7□□□□□ -1.98
Upf3bQ3ULL6 Gm26406-201ENSMUST00000158503 124 ntBASIC2.7□□□□□ -1.98
Upf3bQ3ULL6 Gm16117-201ENSMUST00000160544 324 ntTSL 5 BASIC2.7□□□□□ -1.98
Upf3bQ3ULL6 Gm20450-201ENSMUST00000173652 147 ntBASIC2.7□□□□□ -1.98
Upf3bQ3ULL6 Gm28802-201ENSMUST00000188624 944 ntBASIC2.7□□□□□ -1.98
Upf3bQ3ULL6 Gm29011-201ENSMUST00000191059 712 ntBASIC2.7□□□□□ -1.98
Upf3bQ3ULL6 Gm37664-201ENSMUST00000194607 3813 ntBASIC2.7□□□□□ -1.98
Upf3bQ3ULL6 Gm9632-201ENSMUST00000195934 643 ntBASIC2.7□□□□□ -1.98
Upf3bQ3ULL6 1700108N06Rik-201ENSMUST00000196572 681 ntTSL 5 BASIC2.7□□□□□ -1.98
Upf3bQ3ULL6 Gm42976-201ENSMUST00000200313 222 ntBASIC2.7□□□□□ -1.98
Upf3bQ3ULL6 5430401H09Rik-201ENSMUST00000218145 1076 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
Upf3bQ3ULL6 Olfr1324-203ENSMUST00000219631 1152 ntAPPRIS P2 BASIC2.7□□□□□ -1.98
Upf3bQ3ULL6 AC164597.2-201ENSMUST00000226738 603 ntBASIC2.7□□□□□ -1.98
Upf3bQ3ULL6 AC172751.1-201ENSMUST00000226887 440 ntBASIC2.7□□□□□ -1.98
Upf3bQ3ULL6 AC123860.1-201ENSMUST00000228033 481 ntBASIC2.7□□□□□ -1.98
Upf3bQ3ULL6 Olfr1324-201ENSMUST00000050044 1152 ntAPPRIS ALT2 BASIC2.7□□□□□ -1.98
Upf3bQ3ULL6 Olfr728-201ENSMUST00000051563 936 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
Upf3bQ3ULL6 Olfr1009-201ENSMUST00000055517 945 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
Upf3bQ3ULL6 Olfr204-201ENSMUST00000072517 918 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
Upf3bQ3ULL6 Gm22622-201ENSMUST00000082870 129 ntBASIC2.7□□□□□ -1.98
Upf3bQ3ULL6 CT009504.1-201ENSMUST00000218252 3330 ntBASIC2.7□□□□□ -1.98
Upf3bQ3ULL6 Gm43889-201ENSMUST00000203950 3681 ntBASIC2.7□□□□□ -1.98
Upf3bQ3ULL6 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
Upf3bQ3ULL6 Gm7145-201ENSMUST00000185381 1794 ntAPPRIS P1 TSL 3 BASIC2.69□□□□□ -1.98
Upf3bQ3ULL6 2610300M13Rik-202ENSMUST00000203716 1787 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
Upf3bQ3ULL6 Gm44789-201ENSMUST00000207195 3101 ntBASIC2.69□□□□□ -1.98
Upf3bQ3ULL6 Olfr107-202ENSMUST00000215894 2512 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
Upf3bQ3ULL6 Mir878-201ENSMUST00000104680 78 ntBASIC2.69□□□□□ -1.98
Upf3bQ3ULL6 Gm13046-201ENSMUST00000117391 501 ntBASIC2.69□□□□□ -1.98
Upf3bQ3ULL6 Gm2066-201ENSMUST00000118046 389 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 76,532 protein–RNA pairs in 285.6 ms