Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Spcs2-202ENSMUST00000207063 727 ntTSL 2 BASIC2.97□□□□□ -1.93
Trafd1Q3UDK1 Gm29817-201ENSMUST00000210098 172 ntBASIC2.97□□□□□ -1.93
Trafd1Q3UDK1 Gm46136-201ENSMUST00000214730 565 ntBASIC2.97□□□□□ -1.93
Trafd1Q3UDK1 Gm18252-203ENSMUST00000215855 757 ntBASIC2.97□□□□□ -1.93
Trafd1Q3UDK1 Olfr991-ps1-201ENSMUST00000215967 908 ntBASIC2.97□□□□□ -1.93
Trafd1Q3UDK1 AC134596.2-201ENSMUST00000222158 171 ntBASIC2.97□□□□□ -1.93
Trafd1Q3UDK1 4930469B13Rik-202ENSMUST00000224808 348 ntBASIC2.97□□□□□ -1.93
Trafd1Q3UDK1 AC118639.1-204ENSMUST00000226401 694 ntBASIC2.97□□□□□ -1.93
Trafd1Q3UDK1 AC144819.1-201ENSMUST00000227015 620 ntBASIC2.97□□□□□ -1.93
Trafd1Q3UDK1 Samt4-201ENSMUST00000026029 963 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
Trafd1Q3UDK1 Gm597-201ENSMUST00000059937 2887 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
Trafd1Q3UDK1 Gm44842-201ENSMUST00000209173 3372 ntBASIC2.97□□□□□ -1.93
Trafd1Q3UDK1 Gm37320-201ENSMUST00000192781 4953 ntBASIC2.97□□□□□ -1.93
Trafd1Q3UDK1 Gm14404-201ENSMUST00000119117 1660 ntBASIC2.96□□□□□ -1.94
Trafd1Q3UDK1 Gm25407-201ENSMUST00000104102 134 ntBASIC2.96□□□□□ -1.94
Trafd1Q3UDK1 Gm25560-201ENSMUST00000104606 176 ntBASIC2.96□□□□□ -1.94
Trafd1Q3UDK1 Mir190b-201ENSMUST00000104803 80 ntBASIC2.96□□□□□ -1.94
Trafd1Q3UDK1 Gm14880-201ENSMUST00000117581 292 ntBASIC2.96□□□□□ -1.94
Trafd1Q3UDK1 Gm11268-201ENSMUST00000118347 267 ntBASIC2.96□□□□□ -1.94
Trafd1Q3UDK1 Gm14899-201ENSMUST00000118673 548 ntBASIC2.96□□□□□ -1.94
Trafd1Q3UDK1 Gm12016-201ENSMUST00000119079 681 ntBASIC2.96□□□□□ -1.94
Trafd1Q3UDK1 Gm12935-201ENSMUST00000119352 246 ntBASIC2.96□□□□□ -1.94
Trafd1Q3UDK1 Gm15243-201ENSMUST00000151101 382 ntTSL 2 BASIC2.96□□□□□ -1.94
Trafd1Q3UDK1 Gm16111-201ENSMUST00000162128 285 ntBASIC2.96□□□□□ -1.94
Trafd1Q3UDK1 Vmn1r-ps24-201ENSMUST00000175772 900 ntBASIC2.96□□□□□ -1.94
Trafd1Q3UDK1 Vmn1r-ps152-201ENSMUST00000176452 699 ntBASIC2.96□□□□□ -1.94
Trafd1Q3UDK1 Gm26297-201ENSMUST00000179464 132 ntBASIC2.96□□□□□ -1.94
Trafd1Q3UDK1 Gm25873-201ENSMUST00000180317 107 ntBASIC2.96□□□□□ -1.94
Trafd1Q3UDK1 Gm7870-201ENSMUST00000184467 616 ntBASIC2.96□□□□□ -1.94
Trafd1Q3UDK1 Mir7062-201ENSMUST00000185038 66 ntBASIC2.96□□□□□ -1.94
Trafd1Q3UDK1 Gm19224-201ENSMUST00000190477 793 ntBASIC2.96□□□□□ -1.94
Trafd1Q3UDK1 Gm8242-202ENSMUST00000193056 475 ntBASIC2.96□□□□□ -1.94
Trafd1Q3UDK1 Gm37979-201ENSMUST00000193065 712 ntBASIC2.96□□□□□ -1.94
Trafd1Q3UDK1 Gm44157-201ENSMUST00000204720 410 ntBASIC2.96□□□□□ -1.94
Trafd1Q3UDK1 Gm9967-203ENSMUST00000206903 408 ntTSL 3 BASIC2.96□□□□□ -1.94
Trafd1Q3UDK1 Olfr752-ps1-201ENSMUST00000208736 1141 ntBASIC2.96□□□□□ -1.94
Trafd1Q3UDK1 Gm45368-201ENSMUST00000209323 703 ntTSL 5 BASIC2.96□□□□□ -1.94
Trafd1Q3UDK1 CT010455.1-201ENSMUST00000218579 413 ntBASIC2.96□□□□□ -1.94
Trafd1Q3UDK1 AC123618.1-201ENSMUST00000220174 360 ntBASIC2.96□□□□□ -1.94
Trafd1Q3UDK1 AC158142.2-201ENSMUST00000227892 635 ntBASIC2.96□□□□□ -1.94
Trafd1Q3UDK1 AC147628.1-201ENSMUST00000228193 688 ntBASIC2.96□□□□□ -1.94
Trafd1Q3UDK1 Gm8074-201ENSMUST00000095071 252 ntBASIC2.96□□□□□ -1.94
Trafd1Q3UDK1 Zfp934-202ENSMUST00000101547 2147 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
Trafd1Q3UDK1 Gm42448-201ENSMUST00000197122 2644 ntBASIC2.96□□□□□ -1.94
Trafd1Q3UDK1 Olfr862-202ENSMUST00000079660 2604 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
Trafd1Q3UDK1 Olfr837-202ENSMUST00000215699 3758 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
Trafd1Q3UDK1 Olfr509-203ENSMUST00000214861 3535 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
Trafd1Q3UDK1 AC137842.3-201ENSMUST00000228855 2397 ntBASIC2.95□□□□□ -1.94
Trafd1Q3UDK1 Zfp967-201ENSMUST00000108997 417 ntTSL 3 BASIC2.95□□□□□ -1.94
Trafd1Q3UDK1 Zfp969-201ENSMUST00000109027 417 ntTSL 3 BASIC2.95□□□□□ -1.94
Trafd1Q3UDK1 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC2.95□□□□□ -1.94
Trafd1Q3UDK1 Gm12509-201ENSMUST00000118033 609 ntBASIC2.95□□□□□ -1.94
Trafd1Q3UDK1 Gm15659-201ENSMUST00000118881 341 ntBASIC2.95□□□□□ -1.94
Trafd1Q3UDK1 Olfr1103-ps1-201ENSMUST00000119132 937 ntBASIC2.95□□□□□ -1.94
Trafd1Q3UDK1 Gm13273-201ENSMUST00000119737 159 ntBASIC2.95□□□□□ -1.94
Trafd1Q3UDK1 Gm13443-201ENSMUST00000120770 555 ntBASIC2.95□□□□□ -1.94
Trafd1Q3UDK1 Gm12639-201ENSMUST00000121400 493 ntBASIC2.95□□□□□ -1.94
Trafd1Q3UDK1 Gm15466-201ENSMUST00000122299 333 ntBASIC2.95□□□□□ -1.94
Trafd1Q3UDK1 Gm15521-201ENSMUST00000141752 835 ntTSL 2 BASIC2.95□□□□□ -1.94
Trafd1Q3UDK1 Gm26277-201ENSMUST00000157097 152 ntBASIC2.95□□□□□ -1.94
Trafd1Q3UDK1 Gm22322-201ENSMUST00000157151 111 ntBASIC2.95□□□□□ -1.94
Trafd1Q3UDK1 Gm23716-201ENSMUST00000157348 144 ntBASIC2.95□□□□□ -1.94
Trafd1Q3UDK1 1700016C15Rik-201ENSMUST00000016106 768 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
Trafd1Q3UDK1 Vmn2r-ps80-201ENSMUST00000173697 914 ntBASIC2.95□□□□□ -1.94
Trafd1Q3UDK1 Gm25874-201ENSMUST00000178030 79 ntBASIC2.95□□□□□ -1.94
Trafd1Q3UDK1 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC2.95□□□□□ -1.94
Trafd1Q3UDK1 Gm28113-201ENSMUST00000188280 229 ntBASIC2.95□□□□□ -1.94
Trafd1Q3UDK1 Ighv1-40-201ENSMUST00000194231 345 ntBASIC2.95□□□□□ -1.94
Trafd1Q3UDK1 Gm37910-201ENSMUST00000194770 217 ntTSL 5 BASIC2.95□□□□□ -1.94
Trafd1Q3UDK1 Gm43971-201ENSMUST00000205010 743 ntTSL 3 BASIC2.95□□□□□ -1.94
Trafd1Q3UDK1 Olfr1470-ps1-201ENSMUST00000208620 949 ntBASIC2.95□□□□□ -1.94
Trafd1Q3UDK1 AC153924.1-201ENSMUST00000220117 312 ntBASIC2.95□□□□□ -1.94
Trafd1Q3UDK1 Gm20474-202ENSMUST00000220772 462 ntTSL 5 BASIC2.95□□□□□ -1.94
Trafd1Q3UDK1 AC144733.1-201ENSMUST00000222893 1289 ntBASIC2.95□□□□□ -1.94
Trafd1Q3UDK1 AC154594.1-201ENSMUST00000225171 1273 ntBASIC2.95□□□□□ -1.94
Trafd1Q3UDK1 CT010498.1-201ENSMUST00000225382 546 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
Trafd1Q3UDK1 AC154532.2-201ENSMUST00000228947 598 ntBASIC2.95□□□□□ -1.94
Trafd1Q3UDK1 Gm24622-201ENSMUST00000082619 162 ntBASIC2.95□□□□□ -1.94
Trafd1Q3UDK1 Ccdc18-201ENSMUST00000047677 5336 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
Trafd1Q3UDK1 Vmn1r49-202ENSMUST00000203791 1356 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
Trafd1Q3UDK1 Olfr33-202ENSMUST00000216312 2372 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
Trafd1Q3UDK1 Rgs13-202ENSMUST00000111941 1545 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
Trafd1Q3UDK1 Olfr1461-202ENSMUST00000207113 3481 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
Trafd1Q3UDK1 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC2.94□□□□□ -1.94
Trafd1Q3UDK1 Mir19b-1-201ENSMUST00000102301 87 ntBASIC2.94□□□□□ -1.94
Trafd1Q3UDK1 Mir291a-201ENSMUST00000104815 82 ntBASIC2.94□□□□□ -1.94
Trafd1Q3UDK1 Gm15108-201ENSMUST00000116160 803 ntBASIC2.94□□□□□ -1.94
Trafd1Q3UDK1 Gm14448-201ENSMUST00000116383 210 ntBASIC2.94□□□□□ -1.94
Trafd1Q3UDK1 Vmn1r-ps127-201ENSMUST00000118007 478 ntBASIC2.94□□□□□ -1.94
Trafd1Q3UDK1 Gm15312-201ENSMUST00000118827 271 ntBASIC2.94□□□□□ -1.94
Trafd1Q3UDK1 Gm13627-201ENSMUST00000119700 706 ntBASIC2.94□□□□□ -1.94
Trafd1Q3UDK1 Gm2005-201ENSMUST00000120759 542 ntBASIC2.94□□□□□ -1.94
Trafd1Q3UDK1 Gm15309-201ENSMUST00000121644 240 ntBASIC2.94□□□□□ -1.94
Trafd1Q3UDK1 Gm13782-201ENSMUST00000149515 352 ntTSL 3 BASIC2.94□□□□□ -1.94
Trafd1Q3UDK1 Gm23312-201ENSMUST00000158774 102 ntBASIC2.94□□□□□ -1.94
Trafd1Q3UDK1 Gm17542-201ENSMUST00000169859 99 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
Trafd1Q3UDK1 Gm18520-201ENSMUST00000174783 658 ntBASIC2.94□□□□□ -1.94
Trafd1Q3UDK1 Mir3470b-201ENSMUST00000175563 126 ntBASIC2.94□□□□□ -1.94
Trafd1Q3UDK1 Gm21874-201ENSMUST00000178374 699 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
Trafd1Q3UDK1 Gm20873-201ENSMUST00000179410 699 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
Retrieved 100 of 76,532 protein–RNA pairs in 94.9 ms