Protein–RNA interactions for Protein: Q3U1J4

Ddb1, DNA damage-binding protein 1, mousemouse

Known RBP Predictions only

Length 1,140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddb1Q3U1J4 AC107864.1-201ENSMUST00000217937 496 ntBASIC4.67□□□□□ -1.66
Ddb1Q3U1J4 Gm5955-201ENSMUST00000222712 219 ntBASIC4.67□□□□□ -1.66
Ddb1Q3U1J4 CT030254.2-201ENSMUST00000225902 502 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Ddb1Q3U1J4 AC133076.1-201ENSMUST00000228074 484 ntBASIC4.67□□□□□ -1.66
Ddb1Q3U1J4 Ear14-201ENSMUST00000049559 468 ntBASIC4.67□□□□□ -1.66
Ddb1Q3U1J4 Gm22508-201ENSMUST00000082772 110 ntBASIC4.67□□□□□ -1.66
Ddb1Q3U1J4 Gm25475-201ENSMUST00000082825 180 ntBASIC4.67□□□□□ -1.66
Ddb1Q3U1J4 1700008P02Rik-201ENSMUST00000091364 783 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Ddb1Q3U1J4 Olfr843-202ENSMUST00000214019 7499 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Ddb1Q3U1J4 Olfr729-202ENSMUST00000213163 4283 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Ddb1Q3U1J4 Gm11284-201ENSMUST00000121910 1887 ntBASIC4.66□□□□□ -1.66
Ddb1Q3U1J4 Mef2c-201ENSMUST00000005722 6217 ntTSL 5 BASIC4.66□□□□□ -1.66
Ddb1Q3U1J4 Olfr298-203ENSMUST00000216968 3451 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Ddb1Q3U1J4 Olfr1493-ps1-201ENSMUST00000207208 1777 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Ddb1Q3U1J4 Gm38031-201ENSMUST00000191819 3015 ntBASIC4.66□□□□□ -1.66
Ddb1Q3U1J4 Gm25539-201ENSMUST00000116886 122 ntBASIC4.66□□□□□ -1.66
Ddb1Q3U1J4 Gm11448-201ENSMUST00000120427 450 ntBASIC4.66□□□□□ -1.66
Ddb1Q3U1J4 Gm13406-201ENSMUST00000121991 256 ntBASIC4.66□□□□□ -1.66
Ddb1Q3U1J4 Gm22956-201ENSMUST00000122520 80 ntBASIC4.66□□□□□ -1.66
Ddb1Q3U1J4 Gm24936-201ENSMUST00000122598 247 ntBASIC4.66□□□□□ -1.66
Ddb1Q3U1J4 Gm25807-201ENSMUST00000122783 305 ntBASIC4.66□□□□□ -1.66
Ddb1Q3U1J4 Gm22452-201ENSMUST00000122804 104 ntBASIC4.66□□□□□ -1.66
Ddb1Q3U1J4 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC4.66□□□□□ -1.66
Ddb1Q3U1J4 Gm17159-201ENSMUST00000169043 482 ntBASIC4.66□□□□□ -1.66
Ddb1Q3U1J4 Gm19932-201ENSMUST00000177033 313 ntBASIC4.66□□□□□ -1.66
Ddb1Q3U1J4 Gm37658-201ENSMUST00000192672 315 ntBASIC4.66□□□□□ -1.66
Ddb1Q3U1J4 Gm43804-201ENSMUST00000198280 456 ntBASIC4.66□□□□□ -1.66
Ddb1Q3U1J4 Gm44295-201ENSMUST00000203805 437 ntBASIC4.66□□□□□ -1.66
Ddb1Q3U1J4 AL669916.3-201ENSMUST00000213855 94 ntBASIC4.66□□□□□ -1.66
Ddb1Q3U1J4 AL669916.6-201ENSMUST00000214610 94 ntBASIC4.66□□□□□ -1.66
Ddb1Q3U1J4 AL669916.4-201ENSMUST00000215976 94 ntBASIC4.66□□□□□ -1.66
Ddb1Q3U1J4 AL669916.1-201ENSMUST00000217640 94 ntBASIC4.66□□□□□ -1.66
Ddb1Q3U1J4 Gm7240-201ENSMUST00000220769 664 ntBASIC4.66□□□□□ -1.66
Ddb1Q3U1J4 Cd52-201ENSMUST00000000696 514 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Ddb1Q3U1J4 Gm22572-201ENSMUST00000082985 105 ntBASIC4.66□□□□□ -1.66
Ddb1Q3U1J4 2410024N13Rik-201ENSMUST00000090704 669 ntBASIC4.66□□□□□ -1.66
Ddb1Q3U1J4 Olfr689-201ENSMUST00000098153 1076 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Ddb1Q3U1J4 Nlrp4d-201ENSMUST00000182420 2946 ntBASIC4.66□□□□□ -1.66
Ddb1Q3U1J4 Gm14325-203ENSMUST00000188914 1494 ntTSL 5 BASIC4.66□□□□□ -1.66
Ddb1Q3U1J4 Olfr1185-ps1-201ENSMUST00000075025 3344 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Ddb1Q3U1J4 Uty-208ENSMUST00000154004 4267 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
Ddb1Q3U1J4 Gm17916-201ENSMUST00000186137 1342 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Ddb1Q3U1J4 Gm43923-201ENSMUST00000203992 2911 ntBASIC4.66□□□□□ -1.66
Ddb1Q3U1J4 Gm44679-201ENSMUST00000207202 2908 ntBASIC4.66□□□□□ -1.66
Ddb1Q3U1J4 BC002059-202ENSMUST00000190415 1964 ntTSL 2 BASIC4.65□□□□□ -1.66
Ddb1Q3U1J4 Gm4855-201ENSMUST00000192270 1967 ntBASIC4.65□□□□□ -1.66
Ddb1Q3U1J4 Gm21033-201ENSMUST00000208590 2608 ntBASIC4.65□□□□□ -1.66
Ddb1Q3U1J4 Gm9343-201ENSMUST00000209016 2609 ntBASIC4.65□□□□□ -1.66
Ddb1Q3U1J4 Gm5724-201ENSMUST00000148411 2449 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
Ddb1Q3U1J4 Olfr1043-204ENSMUST00000216028 1824 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
Ddb1Q3U1J4 Syne2-201ENSMUST00000044217 21690 ntAPPRIS P2 TSL 5 BASIC4.65□□□□□ -1.66
Ddb1Q3U1J4 Fgf7-202ENSMUST00000110442 2287 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
Ddb1Q3U1J4 Ighv3-5-201ENSMUST00000103479 299 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Ddb1Q3U1J4 Gm25308-201ENSMUST00000104171 158 ntBASIC4.65□□□□□ -1.67
Ddb1Q3U1J4 Gm22032-201ENSMUST00000116946 116 ntBASIC4.65□□□□□ -1.67
Ddb1Q3U1J4 Gm12805-201ENSMUST00000117305 1048 ntBASIC4.65□□□□□ -1.67
Ddb1Q3U1J4 Gm13806-201ENSMUST00000117822 325 ntBASIC4.65□□□□□ -1.67
Ddb1Q3U1J4 Klrc2-203ENSMUST00000118401 707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
Ddb1Q3U1J4 Klrc2-204ENSMUST00000119533 717 ntAPPRIS P4 TSL 1 (best) BASIC4.65□□□□□ -1.67
Ddb1Q3U1J4 Clec5a-203ENSMUST00000129948 858 ntAPPRIS P4 TSL 1 (best) BASIC4.65□□□□□ -1.67
Ddb1Q3U1J4 Gm22859-201ENSMUST00000174978 122 ntBASIC4.65□□□□□ -1.67
Ddb1Q3U1J4 Cox6b2-208ENSMUST00000183971 401 ntTSL 5 BASIC4.65□□□□□ -1.67
Ddb1Q3U1J4 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC4.65□□□□□ -1.67
Ddb1Q3U1J4 Gm37399-201ENSMUST00000195224 416 ntBASIC4.65□□□□□ -1.67
Ddb1Q3U1J4 Gm42924-201ENSMUST00000197261 185 ntBASIC4.65□□□□□ -1.67
Ddb1Q3U1J4 4930587E11Rik-202ENSMUST00000204857 807 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Ddb1Q3U1J4 1700011C11Rik-201ENSMUST00000205268 365 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Ddb1Q3U1J4 Gm45588-201ENSMUST00000211213 630 ntBASIC4.65□□□□□ -1.67
Ddb1Q3U1J4 Olfr746-202ENSMUST00000218546 987 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Ddb1Q3U1J4 Gm30198-201ENSMUST00000222873 824 ntTSL 2 BASIC4.65□□□□□ -1.67
Ddb1Q3U1J4 Gm23423-201ENSMUST00000082782 106 ntBASIC4.65□□□□□ -1.67
Ddb1Q3U1J4 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Ddb1Q3U1J4 Gm37903-201ENSMUST00000192122 2381 ntBASIC4.65□□□□□ -1.67
Ddb1Q3U1J4 Olfr1356-202ENSMUST00000205100 3023 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.67
Ddb1Q3U1J4 Ktn1-201ENSMUST00000022391 4484 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
Ddb1Q3U1J4 Gm14415-201ENSMUST00000118260 1578 ntBASIC4.65□□□□□ -1.67
Ddb1Q3U1J4 3110080E11Rik-201ENSMUST00000210736 3477 ntBASIC4.65□□□□□ -1.67
Ddb1Q3U1J4 Olfr1500-204ENSMUST00000215760 2305 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Ddb1Q3U1J4 Olfr1019-202ENSMUST00000213515 3031 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Ddb1Q3U1J4 Olfr598-202ENSMUST00000214765 2026 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Ddb1Q3U1J4 Gm10745-201ENSMUST00000192022 1523 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Ddb1Q3U1J4 Trav8-1-201ENSMUST00000103643 328 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Ddb1Q3U1J4 Gm14622-201ENSMUST00000117117 468 ntBASIC4.64□□□□□ -1.67
Ddb1Q3U1J4 Gm14197-201ENSMUST00000117480 1049 ntBASIC4.64□□□□□ -1.67
Ddb1Q3U1J4 Psmb7-ps2-201ENSMUST00000118546 820 ntBASIC4.64□□□□□ -1.67
Ddb1Q3U1J4 Sel1l2-201ENSMUST00000120133 579 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Ddb1Q3U1J4 Gm13443-201ENSMUST00000120770 555 ntBASIC4.64□□□□□ -1.67
Ddb1Q3U1J4 Gm12819-201ENSMUST00000122223 629 ntBASIC4.64□□□□□ -1.67
Ddb1Q3U1J4 Gm23028-201ENSMUST00000158773 265 ntBASIC4.64□□□□□ -1.67
Ddb1Q3U1J4 Ap3m1-ps-201ENSMUST00000177652 1258 ntBASIC4.64□□□□□ -1.67
Ddb1Q3U1J4 Gm24968-201ENSMUST00000179817 107 ntBASIC4.64□□□□□ -1.67
Ddb1Q3U1J4 Gm26870-201ENSMUST00000181242 1170 ntTSL 5 BASIC4.64□□□□□ -1.67
Ddb1Q3U1J4 Gm26960-201ENSMUST00000182263 412 ntBASIC4.64□□□□□ -1.67
Ddb1Q3U1J4 Gm29186-201ENSMUST00000189178 660 ntTSL 2 BASIC4.64□□□□□ -1.67
Ddb1Q3U1J4 Gm37757-201ENSMUST00000193072 210 ntBASIC4.64□□□□□ -1.67
Ddb1Q3U1J4 9530022L04Rik-201ENSMUST00000194340 310 ntBASIC4.64□□□□□ -1.67
Ddb1Q3U1J4 Gm42758-201ENSMUST00000202146 283 ntBASIC4.64□□□□□ -1.67
Ddb1Q3U1J4 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC4.64□□□□□ -1.67
Ddb1Q3U1J4 AC073947.3-201ENSMUST00000215576 766 ntBASIC4.64□□□□□ -1.67
Ddb1Q3U1J4 AC152979.1-201ENSMUST00000218214 289 ntBASIC4.64□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 80.4 ms