Protein–RNA interactions for Protein: Q2UY11

Col28a1, Collagen alpha-1(XXVIII) chain, mousemouse

Predictions only

Length 1,141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1Q2UY11 Olfr945-201ENSMUST00000076903 963 ntAPPRIS P2 BASIC3.66□□□□□ -1.82
Col28a1Q2UY11 Gm22572-201ENSMUST00000082985 105 ntBASIC3.66□□□□□ -1.82
Col28a1Q2UY11 Gm24610-201ENSMUST00000083270 109 ntBASIC3.66□□□□□ -1.82
Col28a1Q2UY11 Mir34b-201ENSMUST00000083558 84 ntBASIC3.66□□□□□ -1.82
Col28a1Q2UY11 Gm16261-201ENSMUST00000096813 205 ntBASIC3.66□□□□□ -1.82
Col28a1Q2UY11 AC154462.1-201ENSMUST00000228897 2260 ntBASIC3.66□□□□□ -1.82
Col28a1Q2UY11 Olfr516-203ENSMUST00000217279 1441 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Col28a1Q2UY11 Gm8744-201ENSMUST00000204475 3581 ntBASIC3.66□□□□□ -1.82
Col28a1Q2UY11 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
Col28a1Q2UY11 Gm43829-201ENSMUST00000196191 3802 ntBASIC3.66□□□□□ -1.82
Col28a1Q2UY11 Stk31-202ENSMUST00000163954 2988 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
Col28a1Q2UY11 Mctp1-202ENSMUST00000109589 1653 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
Col28a1Q2UY11 Svs2-201ENSMUST00000044953 1695 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
Col28a1Q2UY11 Pik3c2a-201ENSMUST00000170430 8044 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
Col28a1Q2UY11 Gm26853-201ENSMUST00000180757 4010 ntTSL 5 BASIC3.65□□□□□ -1.82
Col28a1Q2UY11 Iigp1-201ENSMUST00000032473 3121 ntAPPRIS P1 TSL 3 BASIC3.65□□□□□ -1.82
Col28a1Q2UY11 Ssxb8-201ENSMUST00000101690 518 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Col28a1Q2UY11 Mir450-2-201ENSMUST00000102444 69 ntBASIC3.65□□□□□ -1.83
Col28a1Q2UY11 Gm11219-201ENSMUST00000118565 358 ntBASIC3.65□□□□□ -1.83
Col28a1Q2UY11 Gm13475-201ENSMUST00000119290 234 ntBASIC3.65□□□□□ -1.83
Col28a1Q2UY11 Gm11623-201ENSMUST00000120176 1225 ntBASIC3.65□□□□□ -1.83
Col28a1Q2UY11 Gm15177-201ENSMUST00000120491 577 ntBASIC3.65□□□□□ -1.83
Col28a1Q2UY11 Gm15926-201ENSMUST00000120492 550 ntBASIC3.65□□□□□ -1.83
Col28a1Q2UY11 Gm11829-201ENSMUST00000121003 282 ntBASIC3.65□□□□□ -1.83
Col28a1Q2UY11 Gm25294-201ENSMUST00000122791 104 ntBASIC3.65□□□□□ -1.83
Col28a1Q2UY11 Gm24553-201ENSMUST00000158653 131 ntBASIC3.65□□□□□ -1.83
Col28a1Q2UY11 Gm16567-201ENSMUST00000160967 576 ntTSL 5 BASIC3.65□□□□□ -1.83
Col28a1Q2UY11 Gm22851-201ENSMUST00000178741 94 ntBASIC3.65□□□□□ -1.83
Col28a1Q2UY11 Gm25314-201ENSMUST00000178810 79 ntBASIC3.65□□□□□ -1.83
Col28a1Q2UY11 Ighv6-5-201ENSMUST00000179796 297 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Col28a1Q2UY11 Gm28390-201ENSMUST00000185212 700 ntBASIC3.65□□□□□ -1.83
Col28a1Q2UY11 Npn2-202ENSMUST00000189275 235 ntBASIC3.65□□□□□ -1.83
Col28a1Q2UY11 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
Col28a1Q2UY11 Gm28299-201ENSMUST00000189908 339 ntBASIC3.65□□□□□ -1.83
Col28a1Q2UY11 Gm38356-201ENSMUST00000194313 408 ntBASIC3.65□□□□□ -1.83
Col28a1Q2UY11 Gm38316-201ENSMUST00000194838 469 ntTSL 5 BASIC3.65□□□□□ -1.83
Col28a1Q2UY11 Gm43652-201ENSMUST00000196219 675 ntBASIC3.65□□□□□ -1.83
Col28a1Q2UY11 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC3.65□□□□□ -1.83
Col28a1Q2UY11 Gm42451-201ENSMUST00000197410 244 ntBASIC3.65□□□□□ -1.83
Col28a1Q2UY11 Gm42758-201ENSMUST00000202146 283 ntBASIC3.65□□□□□ -1.83
Col28a1Q2UY11 Gm8745-201ENSMUST00000207846 782 ntBASIC3.65□□□□□ -1.83
Col28a1Q2UY11 Olfr593-202ENSMUST00000210686 951 ntAPPRIS ALT2 BASIC3.65□□□□□ -1.83
Col28a1Q2UY11 AC153568.1-201ENSMUST00000218165 341 ntTSL 2 BASIC3.65□□□□□ -1.83
Col28a1Q2UY11 Gm18120-201ENSMUST00000220079 511 ntBASIC3.65□□□□□ -1.83
Col28a1Q2UY11 Nlrp4e-201ENSMUST00000076470 3382 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Col28a1Q2UY11 Olfr665-204ENSMUST00000216971 3248 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Col28a1Q2UY11 Gm34549-201ENSMUST00000207057 1611 ntTSL 5 BASIC3.65□□□□□ -1.83
Col28a1Q2UY11 AC167420.1-201ENSMUST00000222999 2121 ntBASIC3.65□□□□□ -1.83
Col28a1Q2UY11 Olfr787-202ENSMUST00000213329 4958 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Col28a1Q2UY11 Cp-204ENSMUST00000108328 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
Col28a1Q2UY11 Rbbp8-202ENSMUST00000115861 3523 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Col28a1Q2UY11 Olfr992-203ENSMUST00000214895 2222 ntAPPRIS P1 TSL 3 BASIC3.64□□□□□ -1.83
Col28a1Q2UY11 Vmn2r59-201ENSMUST00000168489 2598 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Col28a1Q2UY11 Obscn-203ENSMUST00000052872 23006 ntTSL 5 BASIC3.64□□□□□ -1.83
Col28a1Q2UY11 Gm37096-201ENSMUST00000192317 2058 ntBASIC3.64□□□□□ -1.83
Col28a1Q2UY11 AC124586.1-201ENSMUST00000221673 2795 ntBASIC3.64□□□□□ -1.83
Col28a1Q2UY11 Olfr1458-202ENSMUST00000215160 1914 ntAPPRIS P5 TSL 5 BASIC3.64□□□□□ -1.83
Col28a1Q2UY11 AC160115.1-201ENSMUST00000224678 1574 ntBASIC3.64□□□□□ -1.83
Col28a1Q2UY11 Gm45792-201ENSMUST00000207795 4268 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Col28a1Q2UY11 Olfr1270-206ENSMUST00000217139 4803 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Col28a1Q2UY11 Olfr970-202ENSMUST00000213975 1630 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Col28a1Q2UY11 Trdv5-201ENSMUST00000103685 438 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Col28a1Q2UY11 Gm23271-201ENSMUST00000104052 124 ntBASIC3.64□□□□□ -1.83
Col28a1Q2UY11 Gm26418-201ENSMUST00000104275 137 ntBASIC3.64□□□□□ -1.83
Col28a1Q2UY11 Zfp972-203ENSMUST00000108986 192 ntTSL 5 BASIC3.64□□□□□ -1.83
Col28a1Q2UY11 Gm13268-201ENSMUST00000117485 433 ntBASIC3.64□□□□□ -1.83
Col28a1Q2UY11 Gm14681-201ENSMUST00000118047 411 ntBASIC3.64□□□□□ -1.83
Col28a1Q2UY11 Gm14594-201ENSMUST00000118052 537 ntBASIC3.64□□□□□ -1.83
Col28a1Q2UY11 Gm14590-201ENSMUST00000118934 537 ntBASIC3.64□□□□□ -1.83
Col28a1Q2UY11 Gm16216-201ENSMUST00000118970 1111 ntBASIC3.64□□□□□ -1.83
Col28a1Q2UY11 Dnaic1-202ENSMUST00000119127 500 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Col28a1Q2UY11 Gm14731-201ENSMUST00000119216 376 ntBASIC3.64□□□□□ -1.83
Col28a1Q2UY11 Gm26476-201ENSMUST00000122618 313 ntBASIC3.64□□□□□ -1.83
Col28a1Q2UY11 Gm16157-201ENSMUST00000124813 534 ntTSL 3 BASIC3.64□□□□□ -1.83
Col28a1Q2UY11 Gm11534-201ENSMUST00000125956 204 ntTSL 3 BASIC3.64□□□□□ -1.83
Col28a1Q2UY11 Gm14364-201ENSMUST00000129209 267 ntBASIC3.64□□□□□ -1.83
Col28a1Q2UY11 Gm11479-201ENSMUST00000134275 387 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Col28a1Q2UY11 Gm15243-201ENSMUST00000151101 382 ntTSL 2 BASIC3.64□□□□□ -1.83
Col28a1Q2UY11 Gm22059-201ENSMUST00000157544 104 ntBASIC3.64□□□□□ -1.83
Col28a1Q2UY11 Gm24419-201ENSMUST00000157875 332 ntBASIC3.64□□□□□ -1.83
Col28a1Q2UY11 Gm10357-201ENSMUST00000159886 264 ntBASIC3.64□□□□□ -1.83
Col28a1Q2UY11 Ear-ps3-201ENSMUST00000168308 445 ntBASIC3.64□□□□□ -1.83
Col28a1Q2UY11 Obox4-ps35-201ENSMUST00000173825 680 ntTSL 3 BASIC3.64□□□□□ -1.83
Col28a1Q2UY11 Mir3070b-201ENSMUST00000175205 89 ntBASIC3.64□□□□□ -1.83
Col28a1Q2UY11 Gm7094-201ENSMUST00000178379 366 ntBASIC3.64□□□□□ -1.83
Col28a1Q2UY11 Gm14596-201ENSMUST00000180268 537 ntBASIC3.64□□□□□ -1.83
Col28a1Q2UY11 Gm14595-201ENSMUST00000180335 537 ntBASIC3.64□□□□□ -1.83
Col28a1Q2UY11 Mir6408-201ENSMUST00000183643 91 ntBASIC3.64□□□□□ -1.83
Col28a1Q2UY11 Gm27161-201ENSMUST00000183960 562 ntBASIC3.64□□□□□ -1.83
Col28a1Q2UY11 Gm29408-201ENSMUST00000187536 216 ntBASIC3.64□□□□□ -1.83
Col28a1Q2UY11 Gm29232-201ENSMUST00000189100 297 ntTSL 5 BASIC3.64□□□□□ -1.83
Col28a1Q2UY11 Gm38008-201ENSMUST00000195333 518 ntBASIC3.64□□□□□ -1.83
Col28a1Q2UY11 Gm8747-201ENSMUST00000195392 751 ntBASIC3.64□□□□□ -1.83
Col28a1Q2UY11 Gm42526-201ENSMUST00000198956 393 ntBASIC3.64□□□□□ -1.83
Col28a1Q2UY11 Igkv14-134-1-201ENSMUST00000199111 331 ntBASIC3.64□□□□□ -1.83
Col28a1Q2UY11 Gm42475-201ENSMUST00000201212 295 ntBASIC3.64□□□□□ -1.83
Col28a1Q2UY11 Gm45023-201ENSMUST00000207951 379 ntBASIC3.64□□□□□ -1.83
Col28a1Q2UY11 AC160016.1-201ENSMUST00000215589 448 ntBASIC3.64□□□□□ -1.83
Col28a1Q2UY11 CAAA01216754.6-201ENSMUST00000217183 398 ntTSL 5 BASIC3.64□□□□□ -1.83
Col28a1Q2UY11 AC107864.1-201ENSMUST00000217937 496 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 74.3 ms