Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Gm19237-201ENSMUST00000205036 1132 ntBASIC5.46□□□□□ -1.53
Col17a1Q07563 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC5.46□□□□□ -1.53
Col17a1Q07563 Olfr962-ps1-201ENSMUST00000217332 442 ntBASIC5.46□□□□□ -1.53
Col17a1Q07563 CT030030.1-201ENSMUST00000218809 152 ntBASIC5.46□□□□□ -1.53
Col17a1Q07563 Mdn1-211ENSMUST00000178134 17959 ntAPPRIS P2 TSL 5 BASIC5.46□□□□□ -1.54
Col17a1Q07563 Gm3683-201ENSMUST00000175701 2513 ntBASIC5.46□□□□□ -1.54
Col17a1Q07563 Gm40909-202ENSMUST00000223275 5564 ntTSL 5 BASIC5.46□□□□□ -1.54
Col17a1Q07563 Krtap24-1-201ENSMUST00000052512 1571 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Col17a1Q07563 AC116557.1-201ENSMUST00000219494 1521 ntBASIC5.46□□□□□ -1.54
Col17a1Q07563 Hfm1-202ENSMUST00000117588 4870 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Col17a1Q07563 Zfp97-201ENSMUST00000147630 2684 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
Col17a1Q07563 Gm14594-201ENSMUST00000118052 537 ntBASIC5.45□□□□□ -1.54
Col17a1Q07563 Gm15312-201ENSMUST00000118827 271 ntBASIC5.45□□□□□ -1.54
Col17a1Q07563 Gm14590-201ENSMUST00000118934 537 ntBASIC5.45□□□□□ -1.54
Col17a1Q07563 Gm5762-201ENSMUST00000119204 258 ntBASIC5.45□□□□□ -1.54
Col17a1Q07563 Gm14506-201ENSMUST00000121165 536 ntBASIC5.45□□□□□ -1.54
Col17a1Q07563 Gm15309-201ENSMUST00000121644 240 ntBASIC5.45□□□□□ -1.54
Col17a1Q07563 Gm15949-201ENSMUST00000129485 126 ntTSL 3 BASIC5.45□□□□□ -1.54
Col17a1Q07563 Gm22361-201ENSMUST00000158435 176 ntBASIC5.45□□□□□ -1.54
Col17a1Q07563 Gm17030-201ENSMUST00000167016 393 ntBASIC5.45□□□□□ -1.54
Col17a1Q07563 Gm14596-201ENSMUST00000180268 537 ntBASIC5.45□□□□□ -1.54
Col17a1Q07563 Gm14595-201ENSMUST00000180335 537 ntBASIC5.45□□□□□ -1.54
Col17a1Q07563 1700063H06Rik-201ENSMUST00000183678 445 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Col17a1Q07563 Mir8118-201ENSMUST00000183962 129 ntBASIC5.45□□□□□ -1.54
Col17a1Q07563 Gm8600-201ENSMUST00000186320 905 ntBASIC5.45□□□□□ -1.54
Col17a1Q07563 4930449A18Rik-202ENSMUST00000192453 1200 ntBASIC5.45□□□□□ -1.54
Col17a1Q07563 Gm37701-201ENSMUST00000192947 1100 ntBASIC5.45□□□□□ -1.54
Col17a1Q07563 Gm44041-201ENSMUST00000203678 396 ntBASIC5.45□□□□□ -1.54
Col17a1Q07563 Gm44254-201ENSMUST00000204184 322 ntBASIC5.45□□□□□ -1.54
Col17a1Q07563 CT025579.1-201ENSMUST00000223779 366 ntBASIC5.45□□□□□ -1.54
Col17a1Q07563 CT009733.1-201ENSMUST00000225322 425 ntBASIC5.45□□□□□ -1.54
Col17a1Q07563 Olfr967-201ENSMUST00000069561 933 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Col17a1Q07563 Gm7117-201ENSMUST00000071515 387 ntBASIC5.45□□□□□ -1.54
Col17a1Q07563 Smcp-201ENSMUST00000098888 861 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Col17a1Q07563 Nlrp4c-201ENSMUST00000037728 3615 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Col17a1Q07563 Olfr1286-202ENSMUST00000184954 3398 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
Col17a1Q07563 C87499-203ENSMUST00000107143 1431 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
Col17a1Q07563 Abca12-201ENSMUST00000087268 9137 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Col17a1Q07563 St8sia4-204ENSMUST00000189556 10027 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Col17a1Q07563 Naa16-201ENSMUST00000022597 13223 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Col17a1Q07563 Olfr365-202ENSMUST00000213969 5333 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Col17a1Q07563 Gm43705-201ENSMUST00000195958 3717 ntBASIC5.45□□□□□ -1.54
Col17a1Q07563 Cr2-212ENSMUST00000210219 4227 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Col17a1Q07563 Gm23578-201ENSMUST00000103943 104 ntBASIC5.45□□□□□ -1.54
Col17a1Q07563 Gm22782-201ENSMUST00000104082 132 ntBASIC5.45□□□□□ -1.54
Col17a1Q07563 Gm9059-201ENSMUST00000118319 183 ntBASIC5.45□□□□□ -1.54
Col17a1Q07563 Gm11862-201ENSMUST00000119678 659 ntBASIC5.45□□□□□ -1.54
Col17a1Q07563 Gm14714-201ENSMUST00000119743 439 ntBASIC5.45□□□□□ -1.54
Col17a1Q07563 Gm14402-201ENSMUST00000122217 508 ntBASIC5.45□□□□□ -1.54
Col17a1Q07563 Gm22651-201ENSMUST00000157872 94 ntBASIC5.45□□□□□ -1.54
Col17a1Q07563 Gm24537-201ENSMUST00000157950 102 ntBASIC5.45□□□□□ -1.54
Col17a1Q07563 Rpl48-ps1-201ENSMUST00000177147 556 ntBASIC5.45□□□□□ -1.54
Col17a1Q07563 Clec5a-204ENSMUST00000177178 665 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
Col17a1Q07563 Gm21726-201ENSMUST00000179654 392 ntBASIC5.45□□□□□ -1.54
Col17a1Q07563 Gm28191-201ENSMUST00000189112 211 ntBASIC5.45□□□□□ -1.54
Col17a1Q07563 Igkv13-57-2-201ENSMUST00000196590 336 ntBASIC5.45□□□□□ -1.54
Col17a1Q07563 Gm2676-201ENSMUST00000207279 606 ntBASIC5.45□□□□□ -1.54
Col17a1Q07563 Gm4528-201ENSMUST00000207905 551 ntBASIC5.45□□□□□ -1.54
Col17a1Q07563 Gm46146-201ENSMUST00000217483 346 ntBASIC5.45□□□□□ -1.54
Col17a1Q07563 AC126253.2-201ENSMUST00000226518 205 ntBASIC5.45□□□□□ -1.54
Col17a1Q07563 Olfr807-201ENSMUST00000059038 997 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Col17a1Q07563 Olfr8-201ENSMUST00000081571 933 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Col17a1Q07563 Gm43319-201ENSMUST00000198036 2270 ntBASIC5.45□□□□□ -1.54
Col17a1Q07563 Gm8989-201ENSMUST00000184782 7275 ntBASIC5.44□□□□□ -1.54
Col17a1Q07563 6720427I07Rik-201ENSMUST00000181490 2300 ntBASIC5.44□□□□□ -1.54
Col17a1Q07563 4930430A15Rik-201ENSMUST00000028577 1840 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Col17a1Q07563 Gm37498-201ENSMUST00000193524 4002 ntBASIC5.44□□□□□ -1.54
Col17a1Q07563 Nufip2-201ENSMUST00000100802 5158 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
Col17a1Q07563 Ssxb8-201ENSMUST00000101690 518 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Col17a1Q07563 Trav12d-2-201ENSMUST00000103593 341 ntAPPRIS ALT2 BASIC5.44□□□□□ -1.54
Col17a1Q07563 Trav12n-2-201ENSMUST00000103619 341 ntAPPRIS ALT2 BASIC5.44□□□□□ -1.54
Col17a1Q07563 Gm12222-201ENSMUST00000121368 260 ntBASIC5.44□□□□□ -1.54
Col17a1Q07563 Gm23754-201ENSMUST00000157576 63 ntBASIC5.44□□□□□ -1.54
Col17a1Q07563 Gm22849-201ENSMUST00000157713 307 ntBASIC5.44□□□□□ -1.54
Col17a1Q07563 Gm13698-201ENSMUST00000178325 732 ntTSL 5 BASIC5.44□□□□□ -1.54
Col17a1Q07563 Gm13694-202ENSMUST00000178655 732 ntTSL 5 BASIC5.44□□□□□ -1.54
Col17a1Q07563 Gm13696-201ENSMUST00000179311 732 ntTSL 5 BASIC5.44□□□□□ -1.54
Col17a1Q07563 Gm13693-202ENSMUST00000179448 732 ntTSL 5 BASIC5.44□□□□□ -1.54
Col17a1Q07563 Gm13695-202ENSMUST00000179504 732 ntTSL 5 BASIC5.44□□□□□ -1.54
Col17a1Q07563 Gm13697-202ENSMUST00000179552 732 ntTSL 5 BASIC5.44□□□□□ -1.54
Col17a1Q07563 Gm29591-201ENSMUST00000188215 357 ntTSL 5 BASIC5.44□□□□□ -1.54
Col17a1Q07563 Gm38353-201ENSMUST00000192351 617 ntTSL 3 BASIC5.44□□□□□ -1.54
Col17a1Q07563 Trbv12-3-201ENSMUST00000192675 372 ntBASIC5.44□□□□□ -1.54
Col17a1Q07563 Olfr192-203ENSMUST00000206214 1054 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Col17a1Q07563 Gm44844-201ENSMUST00000207242 336 ntBASIC5.44□□□□□ -1.54
Col17a1Q07563 Gm6303-201ENSMUST00000210123 471 ntBASIC5.44□□□□□ -1.54
Col17a1Q07563 Gm45814-201ENSMUST00000212646 775 ntBASIC5.44□□□□□ -1.54
Col17a1Q07563 Olfr1101-202ENSMUST00000214411 3235 ntAPPRIS P1 TSL 3 BASIC5.44□□□□□ -1.54
Col17a1Q07563 AC130536.1-201ENSMUST00000224425 271 ntBASIC5.44□□□□□ -1.54
Col17a1Q07563 Pmch-201ENSMUST00000048621 749 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Col17a1Q07563 n-R5s182-201ENSMUST00000083889 107 ntBASIC5.44□□□□□ -1.54
Col17a1Q07563 Olfr1066-201ENSMUST00000099885 942 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Col17a1Q07563 Gm42909-201ENSMUST00000196982 3619 ntBASIC5.44□□□□□ -1.54
Col17a1Q07563 Ptprd-204ENSMUST00000102834 8084 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Col17a1Q07563 Vwc2l-203ENSMUST00000161937 4323 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Col17a1Q07563 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
Col17a1Q07563 Vmn1r217-202ENSMUST00000227110 9888 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Col17a1Q07563 Gm11823-201ENSMUST00000130582 2278 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Col17a1Q07563 Slfn8-203ENSMUST00000108152 3083 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Col17a1Q07563 Gm9696-201ENSMUST00000094227 3050 ntTSL 2 BASIC5.43□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 84.2 ms