Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Vmn1r14-201ENSMUST00000177435 912 ntAPPRIS P2 BASIC2.15□□□□□ -2.07
Nkx3-1P97436 Gm27921-201ENSMUST00000183968 108 ntBASIC2.15□□□□□ -2.07
Nkx3-1P97436 Gm27233-201ENSMUST00000184030 307 ntBASIC2.15□□□□□ -2.07
Nkx3-1P97436 Gm27399-201ENSMUST00000184250 78 ntBASIC2.15□□□□□ -2.07
Nkx3-1P97436 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC2.15□□□□□ -2.07
Nkx3-1P97436 1700052H01Rik-202ENSMUST00000196973 429 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
Nkx3-1P97436 Gm42716-203ENSMUST00000197140 259 ntTSL 3 BASIC2.15□□□□□ -2.07
Nkx3-1P97436 Gm42516-201ENSMUST00000198691 767 ntBASIC2.15□□□□□ -2.07
Nkx3-1P97436 Gm15235-201ENSMUST00000200572 194 ntBASIC2.15□□□□□ -2.07
Nkx3-1P97436 A530053G22Rik-204ENSMUST00000204579 536 ntTSL 2 BASIC2.15□□□□□ -2.07
Nkx3-1P97436 Gm8209-201ENSMUST00000206386 553 ntBASIC2.15□□□□□ -2.07
Nkx3-1P97436 Gm18855-201ENSMUST00000206689 570 ntBASIC2.15□□□□□ -2.07
Nkx3-1P97436 Gm19137-201ENSMUST00000213790 1164 ntBASIC2.15□□□□□ -2.07
Nkx3-1P97436 AC151843.1-201ENSMUST00000215960 691 ntBASIC2.15□□□□□ -2.07
Nkx3-1P97436 CT571256.1-201ENSMUST00000226045 585 ntBASIC2.15□□□□□ -2.07
Nkx3-1P97436 Cox7b2-201ENSMUST00000050129 542 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
Nkx3-1P97436 Gm6812-201ENSMUST00000074894 525 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
Nkx3-1P97436 1700020N15Rik-201ENSMUST00000075654 525 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
Nkx3-1P97436 Olfr381-201ENSMUST00000078358 936 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
Nkx3-1P97436 Olfr116-202ENSMUST00000216128 4477 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Nkx3-1P97436 Gm13757-202ENSMUST00000179450 4383 ntAPPRIS P1 TSL 2 BASIC2.14□□□□□ -2.07
Nkx3-1P97436 Gm14406-201ENSMUST00000108943 531 ntTSL 2 BASIC2.14□□□□□ -2.07
Nkx3-1P97436 Ssxb9-201ENSMUST00000115584 879 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Nkx3-1P97436 Gm11898-201ENSMUST00000117161 385 ntBASIC2.14□□□□□ -2.07
Nkx3-1P97436 Gm649-201ENSMUST00000117284 1054 ntBASIC2.14□□□□□ -2.07
Nkx3-1P97436 Serf1-202ENSMUST00000129014 543 ntAPPRIS P1 TSL 3 BASIC2.14□□□□□ -2.07
Nkx3-1P97436 Gm26099-201ENSMUST00000157248 109 ntBASIC2.14□□□□□ -2.07
Nkx3-1P97436 Gm24771-201ENSMUST00000158508 137 ntBASIC2.14□□□□□ -2.07
Nkx3-1P97436 Gm23205-201ENSMUST00000158671 103 ntBASIC2.14□□□□□ -2.07
Nkx3-1P97436 Vmn1r-ps65-201ENSMUST00000174235 951 ntBASIC2.14□□□□□ -2.07
Nkx3-1P97436 Gm25944-201ENSMUST00000178758 94 ntBASIC2.14□□□□□ -2.07
Nkx3-1P97436 Gm20773-201ENSMUST00000178940 681 ntBASIC2.14□□□□□ -2.07
Nkx3-1P97436 Gm20873-201ENSMUST00000179410 699 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Nkx3-1P97436 1700022E09Rik-201ENSMUST00000185295 299 ntTSL 5 BASIC2.14□□□□□ -2.07
Nkx3-1P97436 Tmem167-ps3-201ENSMUST00000186718 178 ntBASIC2.14□□□□□ -2.07
Nkx3-1P97436 1810022K09Rik-204ENSMUST00000186870 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
Nkx3-1P97436 Gm19891-201ENSMUST00000189771 303 ntBASIC2.14□□□□□ -2.07
Nkx3-1P97436 Gm28552-201ENSMUST00000190725 388 ntBASIC2.14□□□□□ -2.07
Nkx3-1P97436 Gm42425-201ENSMUST00000197756 565 ntTSL 5 BASIC2.14□□□□□ -2.07
Nkx3-1P97436 Gm44320-201ENSMUST00000199276 86 ntBASIC2.14□□□□□ -2.07
Nkx3-1P97436 Gm44348-201ENSMUST00000200165 122 ntBASIC2.14□□□□□ -2.07
Nkx3-1P97436 Gm43897-201ENSMUST00000204019 309 ntBASIC2.14□□□□□ -2.07
Nkx3-1P97436 Gm7751-201ENSMUST00000212868 709 ntBASIC2.14□□□□□ -2.07
Nkx3-1P97436 AC117202.3-201ENSMUST00000228532 310 ntBASIC2.14□□□□□ -2.07
Nkx3-1P97436 Olfr729-201ENSMUST00000061020 972 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Nkx3-1P97436 Olfr1201-201ENSMUST00000073458 924 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Nkx3-1P97436 Gm10780-201ENSMUST00000099459 285 ntBASIC2.14□□□□□ -2.07
Nkx3-1P97436 Mgat4c-211ENSMUST00000163753 3862 ntAPPRIS P1 TSL 3 BASIC2.14□□□□□ -2.07
Nkx3-1P97436 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
Nkx3-1P97436 Fnd3c2-201ENSMUST00000091282 3662 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
Nkx3-1P97436 Gm7145-201ENSMUST00000185381 1794 ntAPPRIS P1 TSL 3 BASIC2.13□□□□□ -2.07
Nkx3-1P97436 Olfr857-202ENSMUST00000212013 2306 ntAPPRIS P1 TSL 3 BASIC2.13□□□□□ -2.07
Nkx3-1P97436 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Nkx3-1P97436 Olfr1467-202ENSMUST00000215096 3671 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Nkx3-1P97436 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC2.13□□□□□ -2.07
Nkx3-1P97436 n-R5s26-201ENSMUST00000104601 122 ntBASIC2.13□□□□□ -2.07
Nkx3-1P97436 Gm14125-201ENSMUST00000113442 680 ntBASIC2.13□□□□□ -2.07
Nkx3-1P97436 Gm12889-201ENSMUST00000118684 241 ntBASIC2.13□□□□□ -2.07
Nkx3-1P97436 Gm12878-201ENSMUST00000118744 332 ntBASIC2.13□□□□□ -2.07
Nkx3-1P97436 Gm12617-201ENSMUST00000121268 381 ntBASIC2.13□□□□□ -2.07
Nkx3-1P97436 Gm24532-201ENSMUST00000157951 286 ntBASIC2.13□□□□□ -2.07
Nkx3-1P97436 Gm16232-201ENSMUST00000162856 167 ntBASIC2.13□□□□□ -2.07
Nkx3-1P97436 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC2.13□□□□□ -2.07
Nkx3-1P97436 Vmn1r-ps19-201ENSMUST00000177008 926 ntBASIC2.13□□□□□ -2.07
Nkx3-1P97436 Gm28637-201ENSMUST00000179424 345 ntBASIC2.13□□□□□ -2.07
Nkx3-1P97436 Gm7909-201ENSMUST00000182688 614 ntBASIC2.13□□□□□ -2.07
Nkx3-1P97436 1110015O18Rik-201ENSMUST00000183632 570 ntTSL 3 BASIC2.13□□□□□ -2.07
Nkx3-1P97436 Gm7135-201ENSMUST00000187538 675 ntTSL 3 BASIC2.13□□□□□ -2.07
Nkx3-1P97436 Gm28744-201ENSMUST00000189939 340 ntBASIC2.13□□□□□ -2.07
Nkx3-1P97436 Gm6801-201ENSMUST00000190697 339 ntBASIC2.13□□□□□ -2.07
Nkx3-1P97436 Gm18340-201ENSMUST00000196342 609 ntBASIC2.13□□□□□ -2.07
Nkx3-1P97436 Gm9373-201ENSMUST00000208724 599 ntBASIC2.13□□□□□ -2.07
Nkx3-1P97436 Olfr500-ps1-201ENSMUST00000208818 933 ntBASIC2.13□□□□□ -2.07
Nkx3-1P97436 Gm45678-201ENSMUST00000210509 295 ntBASIC2.13□□□□□ -2.07
Nkx3-1P97436 AC160970.1-201ENSMUST00000219311 475 ntBASIC2.13□□□□□ -2.07
Nkx3-1P97436 Trdn-207ENSMUST00000219931 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
Nkx3-1P97436 AC159242.1-201ENSMUST00000225832 194 ntBASIC2.13□□□□□ -2.07
Nkx3-1P97436 AC161572.1-201ENSMUST00000227486 640 ntBASIC2.13□□□□□ -2.07
Nkx3-1P97436 Olfr1123-201ENSMUST00000054974 972 ntAPPRIS P2 BASIC2.13□□□□□ -2.07
Nkx3-1P97436 Olfr854-201ENSMUST00000072419 948 ntAPPRIS P2 BASIC2.13□□□□□ -2.07
Nkx3-1P97436 Gm37566-201ENSMUST00000192363 4355 ntBASIC2.13□□□□□ -2.07
Nkx3-1P97436 Gm43326-201ENSMUST00000198459 1638 ntBASIC2.13□□□□□ -2.07
Nkx3-1P97436 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC2.13□□□□□ -2.07
Nkx3-1P97436 Gm43092-201ENSMUST00000202986 1854 ntBASIC2.12□□□□□ -2.07
Nkx3-1P97436 Crisp3-201ENSMUST00000026499 1417 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
Nkx3-1P97436 Vmn1r121-201ENSMUST00000105197 945 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
Nkx3-1P97436 Gm16400-201ENSMUST00000116523 1029 ntBASIC2.12□□□□□ -2.07
Nkx3-1P97436 Rpl31-ps5-201ENSMUST00000118086 375 ntBASIC2.12□□□□□ -2.07
Nkx3-1P97436 Gm9440-201ENSMUST00000119667 539 ntBASIC2.12□□□□□ -2.07
Nkx3-1P97436 Gm13273-201ENSMUST00000119737 159 ntBASIC2.12□□□□□ -2.07
Nkx3-1P97436 Gm16100-201ENSMUST00000120489 231 ntBASIC2.12□□□□□ -2.07
Nkx3-1P97436 Gm15488-201ENSMUST00000121682 670 ntBASIC2.12□□□□□ -2.07
Nkx3-1P97436 Gm14848-201ENSMUST00000121850 467 ntBASIC2.12□□□□□ -2.07
Nkx3-1P97436 Sycp3-203ENSMUST00000125612 1169 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
Nkx3-1P97436 Ptges3-ps-201ENSMUST00000160012 480 ntBASIC2.12□□□□□ -2.07
Nkx3-1P97436 Vmn1r-ps61-201ENSMUST00000173771 822 ntBASIC2.12□□□□□ -2.07
Nkx3-1P97436 Anks1b-207ENSMUST00000182045 544 ntTSL 3 BASIC2.12□□□□□ -2.07
Nkx3-1P97436 Mrps36-ps3-201ENSMUST00000183899 305 ntBASIC2.12□□□□□ -2.07
Nkx3-1P97436 Sprr2g-202ENSMUST00000189634 651 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
Nkx3-1P97436 Gm37281-201ENSMUST00000192412 439 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 84.5 ms