Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 AC168059.2-201ENSMUST00000224473 333 ntBASIC2.88□□□□□ -1.95
Sox3P53784 AC174797.4-201ENSMUST00000225510 347 ntBASIC2.88□□□□□ -1.95
Sox3P53784 AC166369.3-201ENSMUST00000227286 409 ntBASIC2.88□□□□□ -1.95
Sox3P53784 AC168062.2-201ENSMUST00000228907 422 ntBASIC2.88□□□□□ -1.95
Sox3P53784 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
Sox3P53784 Tpbpb-201ENSMUST00000080766 850 ntAPPRIS P2 TSL 1 (best) BASIC2.88□□□□□ -1.95
Sox3P53784 Mroh9-201ENSMUST00000096608 2956 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
Sox3P53784 Spink11-201ENSMUST00000097587 746 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
Sox3P53784 Gm43875-201ENSMUST00000203319 2475 ntBASIC2.88□□□□□ -1.95
Sox3P53784 Olfr849-202ENSMUST00000217273 6140 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
Sox3P53784 Olfr146-203ENSMUST00000214410 1651 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
Sox3P53784 Olfr1037-203ENSMUST00000216020 1359 ntAPPRIS P1 TSL 3 BASIC2.87□□□□□ -1.95
Sox3P53784 Olfr109-203ENSMUST00000214938 5550 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
Sox3P53784 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC2.87□□□□□ -1.95
Sox3P53784 Olfr592-203ENSMUST00000218618 5978 ntTSL 5 BASIC2.87□□□□□ -1.95
Sox3P53784 S100a5-201ENSMUST00000001049 422 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
Sox3P53784 Gm14987-201ENSMUST00000117820 676 ntBASIC2.87□□□□□ -1.95
Sox3P53784 Gm13082-201ENSMUST00000118877 561 ntBASIC2.87□□□□□ -1.95
Sox3P53784 4930515L19Rik-201ENSMUST00000152352 769 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
Sox3P53784 Gm23716-201ENSMUST00000157348 144 ntBASIC2.87□□□□□ -1.95
Sox3P53784 Gm22961-201ENSMUST00000157964 106 ntBASIC2.87□□□□□ -1.95
Sox3P53784 Gm22769-201ENSMUST00000158367 98 ntBASIC2.87□□□□□ -1.95
Sox3P53784 Ear-ps3-201ENSMUST00000168308 445 ntBASIC2.87□□□□□ -1.95
Sox3P53784 Gm4468-201ENSMUST00000170206 294 ntBASIC2.87□□□□□ -1.95
Sox3P53784 Gm24968-201ENSMUST00000179817 107 ntBASIC2.87□□□□□ -1.95
Sox3P53784 Gm27007-201ENSMUST00000183264 279 ntTSL 3 BASIC2.87□□□□□ -1.95
Sox3P53784 Gm37213-201ENSMUST00000193077 586 ntBASIC2.87□□□□□ -1.95
Sox3P53784 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC2.87□□□□□ -1.95
Sox3P53784 Gm44308-201ENSMUST00000197080 99 ntBASIC2.87□□□□□ -1.95
Sox3P53784 C030015E24Rik-201ENSMUST00000198148 828 ntBASIC2.87□□□□□ -1.95
Sox3P53784 Igkv20-101-2-201ENSMUST00000200406 339 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Sox3P53784 Gm28563-201ENSMUST00000201179 211 ntTSL 3 BASIC2.87□□□□□ -1.95
Sox3P53784 Gm29754-201ENSMUST00000206269 358 ntBASIC2.87□□□□□ -1.95
Sox3P53784 Gm45571-201ENSMUST00000209671 569 ntTSL 5 BASIC2.87□□□□□ -1.95
Sox3P53784 AC145736.1-201ENSMUST00000214661 479 ntBASIC2.87□□□□□ -1.95
Sox3P53784 AC157017.2-201ENSMUST00000218354 777 ntBASIC2.87□□□□□ -1.95
Sox3P53784 AC155167.3-201ENSMUST00000226349 217 ntBASIC2.87□□□□□ -1.95
Sox3P53784 Mir465-201ENSMUST00000093563 74 ntBASIC2.87□□□□□ -1.95
Sox3P53784 Gm3234-202ENSMUST00000223301 3250 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
Sox3P53784 Olfr597-202ENSMUST00000216456 2727 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
Sox3P53784 Gm42483-201ENSMUST00000197556 1742 ntBASIC2.87□□□□□ -1.95
Sox3P53784 Gm17916-201ENSMUST00000186137 1342 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
Sox3P53784 Olfr918-202ENSMUST00000215461 3783 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
Sox3P53784 A330044P14Rik-201ENSMUST00000176108 2706 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
Sox3P53784 Olfr844-202ENSMUST00000220268 1686 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Sox3P53784 Vmn1r71-207ENSMUST00000228248 5469 ntAPPRIS P2 BASIC2.86□□□□□ -1.95
Sox3P53784 Tas2r122-201ENSMUST00000105077 930 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
Sox3P53784 Prl3c1-202ENSMUST00000110364 850 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
Sox3P53784 Gm15110-201ENSMUST00000117545 881 ntBASIC2.86□□□□□ -1.95
Sox3P53784 Gm13640-201ENSMUST00000118445 264 ntBASIC2.86□□□□□ -1.95
Sox3P53784 Klrc2-204ENSMUST00000119533 717 ntAPPRIS P4 TSL 1 (best) BASIC2.86□□□□□ -1.95
Sox3P53784 Gm23887-201ENSMUST00000122683 172 ntBASIC2.86□□□□□ -1.95
Sox3P53784 Rps15a-ps5-201ENSMUST00000132586 393 ntBASIC2.86□□□□□ -1.95
Sox3P53784 Gm24213-201ENSMUST00000158255 258 ntBASIC2.86□□□□□ -1.95
Sox3P53784 Gm22500-201ENSMUST00000158982 99 ntBASIC2.86□□□□□ -1.95
Sox3P53784 Gm2966-201ENSMUST00000166052 481 ntBASIC2.86□□□□□ -1.95
Sox3P53784 Rps24-202ENSMUST00000169826 519 ntAPPRIS ALT1 TSL 1 (best) BASIC2.86□□□□□ -1.95
Sox3P53784 Vmn1r-ps26-201ENSMUST00000174239 840 ntBASIC2.86□□□□□ -1.95
Sox3P53784 Gm23415-201ENSMUST00000175519 83 ntBASIC2.86□□□□□ -1.95
Sox3P53784 Gm28412-201ENSMUST00000187243 177 ntBASIC2.86□□□□□ -1.95
Sox3P53784 Gm17838-201ENSMUST00000205872 876 ntBASIC2.86□□□□□ -1.95
Sox3P53784 Olfr850-202ENSMUST00000211832 947 ntAPPRIS ALT2 BASIC2.86□□□□□ -1.95
Sox3P53784 Gm45742-201ENSMUST00000212400 433 ntBASIC2.86□□□□□ -1.95
Sox3P53784 Gm18252-203ENSMUST00000215855 757 ntBASIC2.86□□□□□ -1.95
Sox3P53784 AC153506.2-201ENSMUST00000218051 257 ntBASIC2.86□□□□□ -1.95
Sox3P53784 AC157570.3-201ENSMUST00000219281 205 ntBASIC2.86□□□□□ -1.95
Sox3P53784 D830005E20Rik-202ENSMUST00000219691 971 ntTSL 5 BASIC2.86□□□□□ -1.95
Sox3P53784 Gm34662-201ENSMUST00000220502 215 ntTSL 3 BASIC2.86□□□□□ -1.95
Sox3P53784 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC2.86□□□□□ -1.95
Sox3P53784 Gm2544-201ENSMUST00000222702 756 ntBASIC2.86□□□□□ -1.95
Sox3P53784 AC127371.1-202ENSMUST00000228923 306 ntBASIC2.86□□□□□ -1.95
Sox3P53784 AC154532.2-201ENSMUST00000228947 598 ntBASIC2.86□□□□□ -1.95
Sox3P53784 Gngt1-201ENSMUST00000031673 1183 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
Sox3P53784 Tex36-201ENSMUST00000033275 958 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
Sox3P53784 Olfr1463-201ENSMUST00000064102 933 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
Sox3P53784 Gm26128-201ENSMUST00000083170 110 ntBASIC2.86□□□□□ -1.95
Sox3P53784 Gm22970-201ENSMUST00000083304 186 ntBASIC2.86□□□□□ -1.95
Sox3P53784 Gm4017-201ENSMUST00000084813 338 ntBASIC2.86□□□□□ -1.95
Sox3P53784 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Sox3P53784 Zfp946-204ENSMUST00000167740 1572 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Sox3P53784 Gm7648-201ENSMUST00000173036 1658 ntBASIC2.85□□□□□ -1.95
Sox3P53784 Gm42675-201ENSMUST00000197552 4035 ntBASIC2.85□□□□□ -1.95
Sox3P53784 Zfp97-201ENSMUST00000147630 2684 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
Sox3P53784 A630010A05Rik-201ENSMUST00000100165 684 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
Sox3P53784 Gm25213-201ENSMUST00000102388 113 ntBASIC2.85□□□□□ -1.95
Sox3P53784 Gm26342-201ENSMUST00000104557 129 ntBASIC2.85□□□□□ -1.95
Sox3P53784 Gm6664-201ENSMUST00000119138 468 ntBASIC2.85□□□□□ -1.95
Sox3P53784 Gm12607-201ENSMUST00000120724 493 ntBASIC2.85□□□□□ -1.95
Sox3P53784 Gm14506-201ENSMUST00000121165 536 ntBASIC2.85□□□□□ -1.95
Sox3P53784 Gm12729-201ENSMUST00000130088 624 ntTSL 3 BASIC2.85□□□□□ -1.95
Sox3P53784 Gm15130-201ENSMUST00000132464 663 ntAPPRIS P1 TSL 3 BASIC2.85□□□□□ -1.95
Sox3P53784 Gm5958-201ENSMUST00000147698 297 ntBASIC2.85□□□□□ -1.95
Sox3P53784 Gm24816-201ENSMUST00000175311 151 ntBASIC2.85□□□□□ -1.95
Sox3P53784 Gm25198-201ENSMUST00000178574 110 ntBASIC2.85□□□□□ -1.95
Sox3P53784 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC2.85□□□□□ -1.95
Sox3P53784 Gm38075-201ENSMUST00000191979 920 ntBASIC2.85□□□□□ -1.95
Sox3P53784 Gm38146-201ENSMUST00000194121 1293 ntBASIC2.85□□□□□ -1.95
Sox3P53784 Nras-ps2-201ENSMUST00000195269 178 ntBASIC2.85□□□□□ -1.95
Sox3P53784 Gm43704-201ENSMUST00000196164 496 ntBASIC2.85□□□□□ -1.95
Sox3P53784 Gm36831-201ENSMUST00000196485 631 ntTSL 2 BASIC2.85□□□□□ -1.95
Retrieved 100 of 76,532 protein–RNA pairs in 77.6 ms