Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gm15844-201ENSMUST00000118016 576 ntBASIC2.86□□□□□ -1.95
Cux1P53564 Gm7094-201ENSMUST00000178379 366 ntBASIC2.86□□□□□ -1.95
Cux1P53564 Scgb2b9-ps-201ENSMUST00000189522 334 ntBASIC2.86□□□□□ -1.95
Cux1P53564 Gm6012-201ENSMUST00000210821 730 ntBASIC2.86□□□□□ -1.95
Cux1P53564 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC2.86□□□□□ -1.95
Cux1P53564 Gm8249-201ENSMUST00000219225 465 ntBASIC2.86□□□□□ -1.95
Cux1P53564 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC2.86□□□□□ -1.95
Cux1P53564 Olfr873-201ENSMUST00000053919 1062 ntAPPRIS P2 BASIC2.86□□□□□ -1.95
Cux1P53564 Olfr808-201ENSMUST00000060636 939 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
Cux1P53564 Tas2r104-201ENSMUST00000072404 909 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
Cux1P53564 Olfr954-201ENSMUST00000080329 945 ntAPPRIS P2 BASIC2.86□□□□□ -1.95
Cux1P53564 Olfr1040-201ENSMUST00000099909 942 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
Cux1P53564 Olfr1242-202ENSMUST00000111540 2189 ntAPPRIS P1 TSL 3 BASIC2.86□□□□□ -1.95
Cux1P53564 Mc2r-201ENSMUST00000052347 1562 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
Cux1P53564 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
Cux1P53564 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
Cux1P53564 Gm26080-201ENSMUST00000104069 131 ntBASIC2.85□□□□□ -1.95
Cux1P53564 Cypt15-201ENSMUST00000115114 519 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
Cux1P53564 Gm14292-201ENSMUST00000118761 456 ntBASIC2.85□□□□□ -1.95
Cux1P53564 Gm36638-201ENSMUST00000193295 400 ntBASIC2.85□□□□□ -1.95
Cux1P53564 AC157570.3-201ENSMUST00000219281 205 ntBASIC2.85□□□□□ -1.95
Cux1P53564 Vmn1r17-202ENSMUST00000227966 912 ntAPPRIS P2 BASIC2.85□□□□□ -1.95
Cux1P53564 Gm9747-201ENSMUST00000023262 2822 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
Cux1P53564 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
Cux1P53564 Gm22316-201ENSMUST00000158012 216 ntBASIC2.84□□□□□ -1.95
Cux1P53564 Gm25555-201ENSMUST00000158078 111 ntBASIC2.84□□□□□ -1.95
Cux1P53564 Gm45522-201ENSMUST00000210784 166 ntBASIC2.84□□□□□ -1.95
Cux1P53564 Gm17872-201ENSMUST00000222550 532 ntBASIC2.84□□□□□ -1.95
Cux1P53564 AC122393.1-201ENSMUST00000226570 319 ntBASIC2.84□□□□□ -1.95
Cux1P53564 Olfr857-201ENSMUST00000077023 930 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
Cux1P53564 Olfr427-201ENSMUST00000080831 948 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
Cux1P53564 4930522H14Rik-201ENSMUST00000082306 849 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.95
Cux1P53564 Gm23460-201ENSMUST00000083258 109 ntBASIC2.84□□□□□ -1.95
Cux1P53564 Olfr1101-201ENSMUST00000099870 933 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
Cux1P53564 Vmn1r10-202ENSMUST00000228270 2084 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
Cux1P53564 Gm38265-201ENSMUST00000193479 3766 ntBASIC2.84□□□□□ -1.96
Cux1P53564 Gm12230-201ENSMUST00000118301 454 ntBASIC2.83□□□□□ -1.96
Cux1P53564 Gm14602-201ENSMUST00000118625 340 ntBASIC2.83□□□□□ -1.96
Cux1P53564 Vmn1r-ps143-201ENSMUST00000176730 604 ntBASIC2.83□□□□□ -1.96
Cux1P53564 1700006P03Rik-201ENSMUST00000191810 409 ntBASIC2.83□□□□□ -1.96
Cux1P53564 Gm45380-201ENSMUST00000210465 315 ntBASIC2.83□□□□□ -1.96
Cux1P53564 AC130829.3-201ENSMUST00000222735 154 ntBASIC2.83□□□□□ -1.96
Cux1P53564 Olfr479-201ENSMUST00000063151 1111 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
Cux1P53564 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
Cux1P53564 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
Cux1P53564 Gm25728-201ENSMUST00000104525 159 ntBASIC2.83□□□□□ -1.96
Cux1P53564 Gm22254-201ENSMUST00000179186 110 ntBASIC2.83□□□□□ -1.96
Cux1P53564 Gm18433-201ENSMUST00000192747 197 ntBASIC2.83□□□□□ -1.96
Cux1P53564 Igkv13-76-201ENSMUST00000197621 347 ntBASIC2.83□□□□□ -1.96
Cux1P53564 Gm44059-201ENSMUST00000204048 351 ntBASIC2.83□□□□□ -1.96
Cux1P53564 Gm44881-201ENSMUST00000205425 367 ntBASIC2.83□□□□□ -1.96
Cux1P53564 CT025619.4-201ENSMUST00000217362 350 ntTSL 2 BASIC2.83□□□□□ -1.96
Cux1P53564 AC121286.1-201ENSMUST00000218811 380 ntTSL 3 BASIC2.83□□□□□ -1.96
Cux1P53564 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
Cux1P53564 Skint10-201ENSMUST00000060327 1376 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
Cux1P53564 Gm23256-201ENSMUST00000102235 110 ntBASIC2.82□□□□□ -1.96
Cux1P53564 Gm24889-201ENSMUST00000104388 132 ntBASIC2.82□□□□□ -1.96
Cux1P53564 Gm12294-201ENSMUST00000119723 490 ntBASIC2.82□□□□□ -1.96
Cux1P53564 Arpp19-211ENSMUST00000170310 899 ntTSL 3 BASIC2.82□□□□□ -1.96
Cux1P53564 Gm28872-201ENSMUST00000191518 158 ntBASIC2.82□□□□□ -1.96
Cux1P53564 CAAA01216754.4-201ENSMUST00000216416 802 ntTSL 5 BASIC2.82□□□□□ -1.96
Cux1P53564 Olfr803-201ENSMUST00000056736 927 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
Cux1P53564 Vmn1r226-201ENSMUST00000061756 897 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
Cux1P53564 Olfr1111-201ENSMUST00000099860 940 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
Cux1P53564 Olfr1256-204ENSMUST00000215613 4543 ntAPPRIS P1 TSL 3 BASIC2.82□□□□□ -1.96
Cux1P53564 Gm2869-201ENSMUST00000124359 2621 ntBASIC2.81□□□□□ -1.96
Cux1P53564 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
Cux1P53564 Gm13424-201ENSMUST00000122301 354 ntBASIC2.81□□□□□ -1.96
Cux1P53564 Klra5-204ENSMUST00000169901 792 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
Cux1P53564 Gm17153-201ENSMUST00000171314 490 ntBASIC2.81□□□□□ -1.96
Cux1P53564 Mir7039-201ENSMUST00000183852 85 ntBASIC2.81□□□□□ -1.96
Cux1P53564 Gm11983-202ENSMUST00000184940 318 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
Cux1P53564 Gm37054-201ENSMUST00000193481 543 ntBASIC2.81□□□□□ -1.96
Cux1P53564 AC133498.1-203ENSMUST00000221213 668 ntTSL 3 BASIC2.81□□□□□ -1.96
Cux1P53564 AC122465.2-201ENSMUST00000221774 354 ntBASIC2.81□□□□□ -1.96
Cux1P53564 Mir129-2-201ENSMUST00000083577 90 ntBASIC2.81□□□□□ -1.96
Cux1P53564 Olfr1018-202ENSMUST00000214416 3186 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Cux1P53564 Gm13913-201ENSMUST00000121126 260 ntBASIC2.8□□□□□ -1.96
Cux1P53564 Gm13460-201ENSMUST00000121274 353 ntBASIC2.8□□□□□ -1.96
Cux1P53564 Gm25831-201ENSMUST00000158924 163 ntBASIC2.8□□□□□ -1.96
Cux1P53564 Gm21170-201ENSMUST00000179330 498 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Cux1P53564 Gm45367-201ENSMUST00000210171 347 ntBASIC2.8□□□□□ -1.96
Cux1P53564 CT025525.1-201ENSMUST00000226325 1054 ntBASIC2.8□□□□□ -1.96
Cux1P53564 AC151907.1-201ENSMUST00000228812 412 ntBASIC2.8□□□□□ -1.96
Cux1P53564 Gm24319-201ENSMUST00000083389 107 ntBASIC2.8□□□□□ -1.96
Cux1P53564 Gm15095-201ENSMUST00000118996 1430 ntBASIC2.8□□□□□ -1.96
Cux1P53564 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Cux1P53564 Gm44133-202ENSMUST00000204450 2586 ntBASIC2.79□□□□□ -1.96
Cux1P53564 Gm15159-201ENSMUST00000117062 764 ntBASIC2.79□□□□□ -1.96
Cux1P53564 Gm14020-201ENSMUST00000118165 662 ntBASIC2.79□□□□□ -1.96
Cux1P53564 4930577H14Rik-201ENSMUST00000151367 790 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
Cux1P53564 Gm24666-201ENSMUST00000158937 167 ntBASIC2.79□□□□□ -1.96
Cux1P53564 Gm23714-201ENSMUST00000179259 105 ntBASIC2.79□□□□□ -1.96
Cux1P53564 Gm28155-201ENSMUST00000191066 151 ntBASIC2.79□□□□□ -1.96
Cux1P53564 Gm37290-201ENSMUST00000195775 339 ntBASIC2.79□□□□□ -1.96
Cux1P53564 Gm18341-201ENSMUST00000197538 622 ntBASIC2.79□□□□□ -1.96
Cux1P53564 AC122484.1-201ENSMUST00000221578 177 ntBASIC2.79□□□□□ -1.96
Cux1P53564 Gm33962-201ENSMUST00000182643 2592 ntBASIC2.79□□□□□ -1.96
Cux1P53564 Olfr1218-204ENSMUST00000215054 3875 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Cux1P53564 Gm23183-201ENSMUST00000122595 323 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 91.5 ms