Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 AL772265.1-201ENSMUST00000214379 305 ntBASIC4.14□□□□□ -1.75
Ercc3P49135 Gm20304-201ENSMUST00000218168 444 ntBASIC4.14□□□□□ -1.75
Ercc3P49135 AC112274.2-201ENSMUST00000218436 170 ntBASIC4.14□□□□□ -1.75
Ercc3P49135 Olfr972-201ENSMUST00000079767 945 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Ercc3P49135 Gm10665-201ENSMUST00000098720 966 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Ercc3P49135 Gm10670-201ENSMUST00000098744 966 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Ercc3P49135 Cp-204ENSMUST00000108328 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
Ercc3P49135 Sucnr1-201ENSMUST00000029326 1571 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Ercc3P49135 Gm15319-201ENSMUST00000084046 2522 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Ercc3P49135 Mrgprx2-201ENSMUST00000098433 4610 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Ercc3P49135 Olfr913-201ENSMUST00000081095 2441 ntAPPRIS P1 TSL 3 BASIC4.13□□□□□ -1.75
Ercc3P49135 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Ercc3P49135 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Ercc3P49135 4933413L06Rik-202ENSMUST00000111588 922 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Ercc3P49135 Gm12023-201ENSMUST00000145182 520 ntTSL 5 BASIC4.13□□□□□ -1.75
Ercc3P49135 Gm3848-202ENSMUST00000151564 301 ntTSL 3 BASIC4.13□□□□□ -1.75
Ercc3P49135 Gm24876-201ENSMUST00000158780 92 ntBASIC4.13□□□□□ -1.75
Ercc3P49135 Gm16567-201ENSMUST00000160967 576 ntTSL 5 BASIC4.13□□□□□ -1.75
Ercc3P49135 Mir5129-201ENSMUST00000174938 78 ntBASIC4.13□□□□□ -1.75
Ercc3P49135 Mir5127-201ENSMUST00000175295 71 ntBASIC4.13□□□□□ -1.75
Ercc3P49135 Vmn1r-ps150-201ENSMUST00000176659 736 ntBASIC4.13□□□□□ -1.75
Ercc3P49135 Gm24137-201ENSMUST00000180055 79 ntBASIC4.13□□□□□ -1.75
Ercc3P49135 Gm22391-201ENSMUST00000180356 79 ntBASIC4.13□□□□□ -1.75
Ercc3P49135 Ranbp2-ps8-201ENSMUST00000183723 345 ntBASIC4.13□□□□□ -1.75
Ercc3P49135 Trav14-2-202ENSMUST00000184874 276 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Ercc3P49135 Mir6372-201ENSMUST00000185114 109 ntBASIC4.13□□□□□ -1.75
Ercc3P49135 Gm29452-201ENSMUST00000187996 313 ntBASIC4.13□□□□□ -1.75
Ercc3P49135 Gm28860-201ENSMUST00000188103 313 ntBASIC4.13□□□□□ -1.75
Ercc3P49135 Gm28314-201ENSMUST00000191276 345 ntBASIC4.13□□□□□ -1.75
Ercc3P49135 Gm37568-201ENSMUST00000191755 364 ntBASIC4.13□□□□□ -1.75
Ercc3P49135 Gm38044-201ENSMUST00000192964 487 ntBASIC4.13□□□□□ -1.75
Ercc3P49135 Igkv13-73-1-201ENSMUST00000196767 200 ntBASIC4.13□□□□□ -1.75
Ercc3P49135 AC153361.2-201ENSMUST00000218188 481 ntTSL 5 BASIC4.13□□□□□ -1.75
Ercc3P49135 Gm17890-201ENSMUST00000221419 757 ntBASIC4.13□□□□□ -1.75
Ercc3P49135 AC165366.1-201ENSMUST00000225905 505 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Ercc3P49135 AC154276.2-201ENSMUST00000227707 309 ntBASIC4.13□□□□□ -1.75
Ercc3P49135 Gm4779-201ENSMUST00000056225 672 ntTSL 5 BASIC4.13□□□□□ -1.75
Ercc3P49135 Olfr138-201ENSMUST00000071871 939 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Ercc3P49135 Gm25755-201ENSMUST00000083396 107 ntBASIC4.13□□□□□ -1.75
Ercc3P49135 Prl2b1-201ENSMUST00000091678 891 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
Ercc3P49135 Olfr912-201ENSMUST00000217160 5726 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
Ercc3P49135 Nae1-201ENSMUST00000034349 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Ercc3P49135 Gm4567-202ENSMUST00000190554 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Ercc3P49135 Gm10668-202ENSMUST00000191073 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Ercc3P49135 Gm44846-201ENSMUST00000207127 3243 ntBASIC4.13□□□□□ -1.75
Ercc3P49135 AC124426.1-203ENSMUST00000221814 1362 ntBASIC4.13□□□□□ -1.75
Ercc3P49135 Olfr1243-202ENSMUST00000144885 3148 ntAPPRIS P1 TSL 3 BASIC4.12□□□□□ -1.75
Ercc3P49135 Gm3239-201ENSMUST00000163525 1751 ntAPPRIS P5 TSL 5 BASIC4.12□□□□□ -1.75
Ercc3P49135 Olfr1446-203ENSMUST00000216805 2417 ntAPPRIS P1 TSL 3 BASIC4.12□□□□□ -1.75
Ercc3P49135 Gm45159-201ENSMUST00000208630 25241 ntTSL 5 BASIC4.12□□□□□ -1.75
Ercc3P49135 Gm14811-201ENSMUST00000117070 117 ntBASIC4.12□□□□□ -1.75
Ercc3P49135 Gm12697-201ENSMUST00000118008 667 ntBASIC4.12□□□□□ -1.75
Ercc3P49135 Gm11813-201ENSMUST00000118586 291 ntBASIC4.12□□□□□ -1.75
Ercc3P49135 Gm12640-201ENSMUST00000120097 310 ntBASIC4.12□□□□□ -1.75
Ercc3P49135 Gm15381-201ENSMUST00000121501 1156 ntBASIC4.12□□□□□ -1.75
Ercc3P49135 Gm25784-201ENSMUST00000122524 81 ntBASIC4.12□□□□□ -1.75
Ercc3P49135 Gm12649-201ENSMUST00000137509 581 ntTSL 3 BASIC4.12□□□□□ -1.75
Ercc3P49135 Gm12898-201ENSMUST00000144407 642 ntTSL 3 BASIC4.12□□□□□ -1.75
Ercc3P49135 Gm13775-201ENSMUST00000153865 751 ntTSL 3 BASIC4.12□□□□□ -1.75
Ercc3P49135 Gm22555-201ENSMUST00000157801 62 ntBASIC4.12□□□□□ -1.75
Ercc3P49135 Gm23022-201ENSMUST00000158768 180 ntBASIC4.12□□□□□ -1.75
Ercc3P49135 Gm17119-201ENSMUST00000163943 280 ntBASIC4.12□□□□□ -1.75
Ercc3P49135 Olfr756-ps1-201ENSMUST00000173450 928 ntBASIC4.12□□□□□ -1.75
Ercc3P49135 Trav7-3-201ENSMUST00000177622 402 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Ercc3P49135 Gm21828-201ENSMUST00000178050 543 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Ercc3P49135 Gm21866-201ENSMUST00000178428 543 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Ercc3P49135 Gm21725-201ENSMUST00000178519 543 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Ercc3P49135 Gm21800-201ENSMUST00000178559 543 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Ercc3P49135 Gm25198-201ENSMUST00000178574 110 ntBASIC4.12□□□□□ -1.75
Ercc3P49135 Gm21852-201ENSMUST00000179125 543 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Ercc3P49135 Gm21764-201ENSMUST00000179219 543 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Ercc3P49135 Gm21891-201ENSMUST00000179284 543 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Ercc3P49135 Gm21904-201ENSMUST00000179522 543 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Ercc3P49135 Gm25156-201ENSMUST00000179809 79 ntBASIC4.12□□□□□ -1.75
Ercc3P49135 Gm26871-205ENSMUST00000181926 742 ntTSL 3 BASIC4.12□□□□□ -1.75
Ercc3P49135 Zfp-ps-201ENSMUST00000185025 478 ntBASIC4.12□□□□□ -1.75
Ercc3P49135 Rpl23a-ps10-201ENSMUST00000185511 462 ntBASIC4.12□□□□□ -1.75
Ercc3P49135 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC4.12□□□□□ -1.75
Ercc3P49135 Gm42924-201ENSMUST00000197261 185 ntBASIC4.12□□□□□ -1.75
Ercc3P49135 Gm44927-201ENSMUST00000207573 716 ntBASIC4.12□□□□□ -1.75
Ercc3P49135 Gm45232-201ENSMUST00000207811 162 ntBASIC4.12□□□□□ -1.75
Ercc3P49135 Gm18672-201ENSMUST00000208035 270 ntBASIC4.12□□□□□ -1.75
Ercc3P49135 Gm3442-201ENSMUST00000216808 710 ntBASIC4.12□□□□□ -1.75
Ercc3P49135 AC158631.1-201ENSMUST00000219202 138 ntBASIC4.12□□□□□ -1.75
Ercc3P49135 AC154603.1-201ENSMUST00000224355 313 ntBASIC4.12□□□□□ -1.75
Ercc3P49135 Gm23503-201ENSMUST00000083903 107 ntBASIC4.12□□□□□ -1.75
Ercc3P49135 Gm10267-201ENSMUST00000091916 258 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
Ercc3P49135 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Ercc3P49135 Gm8011-201ENSMUST00000172163 1751 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Ercc3P49135 Prl7d1-203ENSMUST00000224026 3657 ntAPPRIS P2 BASIC4.11□□□□□ -1.75
Ercc3P49135 Olfr918-202ENSMUST00000215461 3783 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
Ercc3P49135 Gm11042-201ENSMUST00000110441 120 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Ercc3P49135 Gm25773-201ENSMUST00000116718 127 ntBASIC4.11□□□□□ -1.75
Ercc3P49135 Gm14518-201ENSMUST00000117351 542 ntBASIC4.11□□□□□ -1.75
Ercc3P49135 Vmn1r-ps106-201ENSMUST00000120587 824 ntBASIC4.11□□□□□ -1.75
Ercc3P49135 Gm13406-201ENSMUST00000121991 256 ntBASIC4.11□□□□□ -1.75
Ercc3P49135 Gm24936-201ENSMUST00000122598 247 ntBASIC4.11□□□□□ -1.75
Ercc3P49135 Gm13266-201ENSMUST00000141869 579 ntTSL 2 BASIC4.11□□□□□ -1.75
Ercc3P49135 Gm22793-201ENSMUST00000157227 330 ntBASIC4.11□□□□□ -1.75
Ercc3P49135 Gm24730-201ENSMUST00000158228 117 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 77.9 ms