Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm27163-201ENSMUST00000184767 409 ntBASIC2.74□□□□□ -1.97
Col2a1P28481 Gm29281-201ENSMUST00000188077 381 ntBASIC2.74□□□□□ -1.97
Col2a1P28481 Gm38008-201ENSMUST00000195333 518 ntBASIC2.74□□□□□ -1.97
Col2a1P28481 Igkv15-101-1-201ENSMUST00000196661 258 ntBASIC2.74□□□□□ -1.97
Col2a1P28481 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC2.74□□□□□ -1.97
Col2a1P28481 Gm44282-201ENSMUST00000203199 190 ntBASIC2.74□□□□□ -1.97
Col2a1P28481 Gm19253-201ENSMUST00000204279 307 ntBASIC2.74□□□□□ -1.97
Col2a1P28481 Gm30239-202ENSMUST00000223193 631 ntTSL 5 BASIC2.74□□□□□ -1.97
Col2a1P28481 CT030135.1-201ENSMUST00000223760 570 ntBASIC2.74□□□□□ -1.97
Col2a1P28481 AC154484.1-201ENSMUST00000227311 771 ntBASIC2.74□□□□□ -1.97
Col2a1P28481 Spinkl-201ENSMUST00000066328 593 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
Col2a1P28481 Olfr136-201ENSMUST00000077203 939 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Col2a1P28481 Gm9174-201ENSMUST00000078149 255 ntBASIC2.74□□□□□ -1.97
Col2a1P28481 Olfr191-201ENSMUST00000078517 930 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Col2a1P28481 Gm24144-201ENSMUST00000082632 111 ntBASIC2.74□□□□□ -1.97
Col2a1P28481 Mir463-201ENSMUST00000093570 75 ntBASIC2.74□□□□□ -1.97
Col2a1P28481 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
Col2a1P28481 Ifi209-201ENSMUST00000056071 3439 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
Col2a1P28481 Gm36962-201ENSMUST00000192114 1761 ntBASIC2.74□□□□□ -1.97
Col2a1P28481 Gm5570-202ENSMUST00000101355 2527 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
Col2a1P28481 C87977-201ENSMUST00000105753 2446 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
Col2a1P28481 Ighv1-4-201ENSMUST00000103493 351 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
Col2a1P28481 Mir669p-2-201ENSMUST00000103868 87 ntBASIC2.73□□□□□ -1.97
Col2a1P28481 Mir669p-1-201ENSMUST00000103884 87 ntBASIC2.73□□□□□ -1.97
Col2a1P28481 Gm15001-201ENSMUST00000117657 795 ntBASIC2.73□□□□□ -1.97
Col2a1P28481 Gm12383-201ENSMUST00000120628 760 ntBASIC2.73□□□□□ -1.97
Col2a1P28481 Cyp4a29-ps1-201ENSMUST00000120882 171 ntBASIC2.73□□□□□ -1.97
Col2a1P28481 Gm26424-201ENSMUST00000122530 104 ntBASIC2.73□□□□□ -1.97
Col2a1P28481 Gm23670-201ENSMUST00000157469 119 ntBASIC2.73□□□□□ -1.97
Col2a1P28481 Gm16561-201ENSMUST00000163001 192 ntBASIC2.73□□□□□ -1.97
Col2a1P28481 Olfr757-ps1-201ENSMUST00000172798 413 ntBASIC2.73□□□□□ -1.97
Col2a1P28481 Gm22646-201ENSMUST00000175130 115 ntBASIC2.73□□□□□ -1.97
Col2a1P28481 Gm27527-201ENSMUST00000183903 99 ntBASIC2.73□□□□□ -1.97
Col2a1P28481 Gm36974-201ENSMUST00000194200 1071 ntBASIC2.73□□□□□ -1.97
Col2a1P28481 Rpl26-ps3-201ENSMUST00000195115 435 ntBASIC2.73□□□□□ -1.97
Col2a1P28481 Gm43512-201ENSMUST00000198495 176 ntBASIC2.73□□□□□ -1.97
Col2a1P28481 Gm43004-201ENSMUST00000201872 703 ntBASIC2.73□□□□□ -1.97
Col2a1P28481 Gm44072-201ENSMUST00000203666 383 ntTSL 3 BASIC2.73□□□□□ -1.97
Col2a1P28481 Gm44857-201ENSMUST00000208331 196 ntBASIC2.73□□□□□ -1.97
Col2a1P28481 Gm45382-201ENSMUST00000210607 151 ntBASIC2.73□□□□□ -1.97
Col2a1P28481 Gm30674-201ENSMUST00000214523 392 ntBASIC2.73□□□□□ -1.97
Col2a1P28481 Gm19709-201ENSMUST00000215403 482 ntBASIC2.73□□□□□ -1.97
Col2a1P28481 Olfr1040-201ENSMUST00000099909 942 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
Col2a1P28481 Gm15773-201ENSMUST00000118665 1448 ntBASIC2.73□□□□□ -1.97
Col2a1P28481 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
Col2a1P28481 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
Col2a1P28481 Gm6913-201ENSMUST00000100019 348 ntBASIC2.72□□□□□ -1.97
Col2a1P28481 Gm23060-201ENSMUST00000102345 109 ntBASIC2.72□□□□□ -1.97
Col2a1P28481 Gm12448-201ENSMUST00000118852 655 ntBASIC2.72□□□□□ -1.97
Col2a1P28481 Gm14607-201ENSMUST00000119119 491 ntBASIC2.72□□□□□ -1.97
Col2a1P28481 Rpl23a-ps6-201ENSMUST00000119466 468 ntBASIC2.72□□□□□ -1.97
Col2a1P28481 Gm15193-201ENSMUST00000120224 865 ntBASIC2.72□□□□□ -1.97
Col2a1P28481 Gm15536-201ENSMUST00000121411 114 ntBASIC2.72□□□□□ -1.97
Col2a1P28481 Gm13743-201ENSMUST00000121486 724 ntBASIC2.72□□□□□ -1.97
Col2a1P28481 Gm13131-201ENSMUST00000122228 321 ntBASIC2.72□□□□□ -1.97
Col2a1P28481 Vmn1r-ps3-201ENSMUST00000122439 917 ntBASIC2.72□□□□□ -1.97
Col2a1P28481 Gm6182-201ENSMUST00000156439 1208 ntBASIC2.72□□□□□ -1.97
Col2a1P28481 Gm24198-201ENSMUST00000157812 108 ntBASIC2.72□□□□□ -1.97
Col2a1P28481 Gm23317-201ENSMUST00000157999 129 ntBASIC2.72□□□□□ -1.97
Col2a1P28481 Gm17072-201ENSMUST00000166673 658 ntBASIC2.72□□□□□ -1.97
Col2a1P28481 Gm5538-201ENSMUST00000168156 1235 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
Col2a1P28481 Gm22264-201ENSMUST00000178200 107 ntBASIC2.72□□□□□ -1.97
Col2a1P28481 Gm27025-201ENSMUST00000182392 942 ntBASIC2.72□□□□□ -1.97
Col2a1P28481 1810007C17Rik-201ENSMUST00000187665 710 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
Col2a1P28481 Gm38149-201ENSMUST00000191943 339 ntBASIC2.72□□□□□ -1.97
Col2a1P28481 Gm43236-201ENSMUST00000197414 313 ntTSL 5 BASIC2.72□□□□□ -1.97
Col2a1P28481 Gm43587-201ENSMUST00000199590 204 ntBASIC2.72□□□□□ -1.97
Col2a1P28481 Gm43493-201ENSMUST00000199837 202 ntBASIC2.72□□□□□ -1.97
Col2a1P28481 Igkv13-82-201ENSMUST00000200308 346 ntBASIC2.72□□□□□ -1.97
Col2a1P28481 Gm45189-201ENSMUST00000208567 363 ntBASIC2.72□□□□□ -1.97
Col2a1P28481 Olfr838-ps1-201ENSMUST00000211872 977 ntBASIC2.72□□□□□ -1.97
Col2a1P28481 AC171204.1-201ENSMUST00000215867 975 ntTSL 5 BASIC2.72□□□□□ -1.97
Col2a1P28481 AC159472.1-201ENSMUST00000218178 463 ntBASIC2.72□□□□□ -1.97
Col2a1P28481 Gm4263-202ENSMUST00000221392 667 ntBASIC2.72□□□□□ -1.97
Col2a1P28481 AC160999.1-201ENSMUST00000225675 810 ntBASIC2.72□□□□□ -1.97
Col2a1P28481 Olfr728-201ENSMUST00000051563 936 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
Col2a1P28481 Olfr1489-201ENSMUST00000053113 1111 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
Col2a1P28481 Olfr787-201ENSMUST00000077836 939 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
Col2a1P28481 Gm25403-201ENSMUST00000082971 143 ntBASIC2.72□□□□□ -1.97
Col2a1P28481 Gm42483-201ENSMUST00000197556 1742 ntBASIC2.72□□□□□ -1.97
Col2a1P28481 Gm44230-201ENSMUST00000203032 3550 ntBASIC2.72□□□□□ -1.97
Col2a1P28481 Vmn2r90-201ENSMUST00000169805 2592 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
Col2a1P28481 Gulp1-206ENSMUST00000162600 2798 ntTSL 5 BASIC2.72□□□□□ -1.97
Col2a1P28481 Gm23950-201ENSMUST00000104026 129 ntBASIC2.71□□□□□ -1.97
Col2a1P28481 Gm22019-201ENSMUST00000104359 96 ntBASIC2.71□□□□□ -1.97
Col2a1P28481 Gm11146-201ENSMUST00000114231 96 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.97
Col2a1P28481 Gm15125-201ENSMUST00000116185 800 ntBASIC2.71□□□□□ -1.97
Col2a1P28481 Gm24907-201ENSMUST00000116932 128 ntBASIC2.71□□□□□ -1.97
Col2a1P28481 Gm14898-201ENSMUST00000120202 645 ntBASIC2.71□□□□□ -1.97
Col2a1P28481 Gm11389-201ENSMUST00000121407 430 ntBASIC2.71□□□□□ -1.97
Col2a1P28481 Gm9001-201ENSMUST00000121642 399 ntBASIC2.71□□□□□ -1.97
Col2a1P28481 Gm13194-201ENSMUST00000142299 311 ntBASIC2.71□□□□□ -1.97
Col2a1P28481 Gm12914-201ENSMUST00000148635 305 ntTSL 5 BASIC2.71□□□□□ -1.97
Col2a1P28481 Gm24436-201ENSMUST00000157889 302 ntBASIC2.71□□□□□ -1.97
Col2a1P28481 Gm23223-201ENSMUST00000158119 127 ntBASIC2.71□□□□□ -1.97
Col2a1P28481 Olfr180-201ENSMUST00000171656 1154 ntAPPRIS P2 TSL 2 BASIC2.71□□□□□ -1.97
Col2a1P28481 Vmn2r-ps76-201ENSMUST00000173876 739 ntBASIC2.71□□□□□ -1.97
Col2a1P28481 Gtpbp4-ps2-201ENSMUST00000184058 256 ntBASIC2.71□□□□□ -1.97
Col2a1P28481 Gm27399-201ENSMUST00000184250 78 ntBASIC2.71□□□□□ -1.97
Col2a1P28481 Gm29460-201ENSMUST00000188607 714 ntBASIC2.71□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 66 ms