Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm12722-201ENSMUST00000118507 493 ntBASIC2.49□□□□□ -2.01
Cdx1P18111 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC2.49□□□□□ -2.01
Cdx1P18111 Scgb2b22-ps-201ENSMUST00000121947 340 ntBASIC2.49□□□□□ -2.01
Cdx1P18111 Rpl30-ps9-201ENSMUST00000122265 345 ntBASIC2.49□□□□□ -2.01
Cdx1P18111 Gm15274-201ENSMUST00000131442 291 ntBASIC2.49□□□□□ -2.01
Cdx1P18111 Gm21979-201ENSMUST00000139887 291 ntBASIC2.49□□□□□ -2.01
Cdx1P18111 Ppp1r2-ps7-201ENSMUST00000140102 609 ntBASIC2.49□□□□□ -2.01
Cdx1P18111 Gm15259-201ENSMUST00000151262 291 ntBASIC2.49□□□□□ -2.01
Cdx1P18111 Mir5129-201ENSMUST00000174938 78 ntBASIC2.49□□□□□ -2.01
Cdx1P18111 Gm24819-201ENSMUST00000175094 166 ntBASIC2.49□□□□□ -2.01
Cdx1P18111 Mir6411-201ENSMUST00000183556 108 ntBASIC2.49□□□□□ -2.01
Cdx1P18111 Mir6413-201ENSMUST00000184049 108 ntBASIC2.49□□□□□ -2.01
Cdx1P18111 Gm28744-201ENSMUST00000189939 340 ntBASIC2.49□□□□□ -2.01
Cdx1P18111 Gm38353-201ENSMUST00000192351 617 ntTSL 3 BASIC2.49□□□□□ -2.01
Cdx1P18111 Gm5983-201ENSMUST00000197739 770 ntBASIC2.49□□□□□ -2.01
Cdx1P18111 Gm43228-201ENSMUST00000200735 264 ntBASIC2.49□□□□□ -2.01
Cdx1P18111 Gm44041-201ENSMUST00000203678 396 ntBASIC2.49□□□□□ -2.01
Cdx1P18111 Nat1-202ENSMUST00000212171 1208 ntAPPRIS ALT1 TSL 5 BASIC2.49□□□□□ -2.01
Cdx1P18111 AC167202.1-201ENSMUST00000219027 331 ntBASIC2.49□□□□□ -2.01
Cdx1P18111 AC155929.1-201ENSMUST00000220217 1276 ntBASIC2.49□□□□□ -2.01
Cdx1P18111 Gm36525-201ENSMUST00000222590 638 ntTSL 5 BASIC2.49□□□□□ -2.01
Cdx1P18111 Gm46367-202ENSMUST00000222771 501 ntTSL 5 BASIC2.49□□□□□ -2.01
Cdx1P18111 AC168059.2-201ENSMUST00000224473 333 ntBASIC2.49□□□□□ -2.01
Cdx1P18111 AC166369.1-201ENSMUST00000228126 351 ntBASIC2.49□□□□□ -2.01
Cdx1P18111 AC127371.1-202ENSMUST00000228923 306 ntBASIC2.49□□□□□ -2.01
Cdx1P18111 Acrv1-201ENSMUST00000034620 1101 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Cdx1P18111 Snord35b-201ENSMUST00000082833 87 ntBASIC2.49□□□□□ -2.01
Cdx1P18111 Prl2b1-201ENSMUST00000091678 891 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
Cdx1P18111 Vmn1r85-201ENSMUST00000094829 927 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Cdx1P18111 Gm37928-201ENSMUST00000193265 4131 ntBASIC2.49□□□□□ -2.01
Cdx1P18111 AC122850.1-201ENSMUST00000220380 5690 ntBASIC2.49□□□□□ -2.01
Cdx1P18111 Gm10647-201ENSMUST00000098612 2036 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Cdx1P18111 Gpr174-201ENSMUST00000101294 4614 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Cdx1P18111 Esp31-201ENSMUST00000174742 1308 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
Cdx1P18111 AC152951.2-201ENSMUST00000218293 3587 ntBASIC2.48□□□□□ -2.01
Cdx1P18111 Snord14c-201ENSMUST00000101927 86 ntBASIC2.48□□□□□ -2.01
Cdx1P18111 Gm23747-201ENSMUST00000104228 131 ntBASIC2.48□□□□□ -2.01
Cdx1P18111 Gm26145-201ENSMUST00000104476 127 ntBASIC2.48□□□□□ -2.01
Cdx1P18111 Catsper4-202ENSMUST00000105878 632 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
Cdx1P18111 2010106E10Rik-202ENSMUST00000113412 1276 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
Cdx1P18111 Gm14622-201ENSMUST00000117117 468 ntBASIC2.48□□□□□ -2.01
Cdx1P18111 Gm7974-201ENSMUST00000117154 408 ntBASIC2.48□□□□□ -2.01
Cdx1P18111 Gm14982-201ENSMUST00000121102 442 ntBASIC2.48□□□□□ -2.01
Cdx1P18111 Gm6762-201ENSMUST00000121769 289 ntBASIC2.48□□□□□ -2.01
Cdx1P18111 Gm24936-201ENSMUST00000122598 247 ntBASIC2.48□□□□□ -2.01
Cdx1P18111 4930527E20Rik-201ENSMUST00000135700 351 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
Cdx1P18111 Gm26101-201ENSMUST00000157246 105 ntBASIC2.48□□□□□ -2.01
Cdx1P18111 Gm24736-201ENSMUST00000158862 130 ntBASIC2.48□□□□□ -2.01
Cdx1P18111 Scgb2b23-ps-202ENSMUST00000167012 516 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
Cdx1P18111 Gm8392-201ENSMUST00000185647 835 ntBASIC2.48□□□□□ -2.01
Cdx1P18111 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC2.48□□□□□ -2.01
Cdx1P18111 Gm17790-201ENSMUST00000191545 1228 ntBASIC2.48□□□□□ -2.01
Cdx1P18111 Gm43070-201ENSMUST00000196938 415 ntBASIC2.48□□□□□ -2.01
Cdx1P18111 Gm19457-201ENSMUST00000200995 448 ntBASIC2.48□□□□□ -2.01
Cdx1P18111 Gm44478-201ENSMUST00000204875 114 ntBASIC2.48□□□□□ -2.01
Cdx1P18111 Gm44808-201ENSMUST00000208887 264 ntTSL 5 BASIC2.48□□□□□ -2.01
Cdx1P18111 Gm45438-201ENSMUST00000210242 564 ntBASIC2.48□□□□□ -2.01
Cdx1P18111 Gm7948-201ENSMUST00000212607 844 ntBASIC2.48□□□□□ -2.01
Cdx1P18111 AC073947.3-201ENSMUST00000215576 766 ntBASIC2.48□□□□□ -2.01
Cdx1P18111 4930545L08Rik-201ENSMUST00000215688 566 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
Cdx1P18111 CT010455.1-201ENSMUST00000218579 413 ntBASIC2.48□□□□□ -2.01
Cdx1P18111 AC157570.3-201ENSMUST00000219281 205 ntBASIC2.48□□□□□ -2.01
Cdx1P18111 Olfr164-201ENSMUST00000056727 1095 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
Cdx1P18111 Defb9-201ENSMUST00000057076 310 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
Cdx1P18111 Olfr810-201ENSMUST00000091986 1006 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
Cdx1P18111 Olfr136-202ENSMUST00000208525 2534 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Cdx1P18111 C030005K15Rik-201ENSMUST00000166373 1882 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
Cdx1P18111 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Cdx1P18111 Gm19965-201ENSMUST00000179777 3030 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Cdx1P18111 Olfr830-202ENSMUST00000212723 3105 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
Cdx1P18111 Ighv1-54-201ENSMUST00000103525 377 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
Cdx1P18111 Gm24118-201ENSMUST00000103972 126 ntBASIC2.47□□□□□ -2.01
Cdx1P18111 Gm26254-201ENSMUST00000122491 118 ntBASIC2.47□□□□□ -2.01
Cdx1P18111 Gm25490-201ENSMUST00000158734 130 ntBASIC2.47□□□□□ -2.01
Cdx1P18111 Gm16236-201ENSMUST00000159588 379 ntBASIC2.47□□□□□ -2.01
Cdx1P18111 Mir5099-201ENSMUST00000175257 74 ntBASIC2.47□□□□□ -2.01
Cdx1P18111 Gm21900-201ENSMUST00000179612 543 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
Cdx1P18111 Scgb2b31-ps-201ENSMUST00000188734 328 ntBASIC2.47□□□□□ -2.01
Cdx1P18111 Gm42924-201ENSMUST00000197261 185 ntBASIC2.47□□□□□ -2.01
Cdx1P18111 Gm40292-201ENSMUST00000202383 553 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
Cdx1P18111 Gm43932-201ENSMUST00000204499 52 ntBASIC2.47□□□□□ -2.01
Cdx1P18111 Gm44555-201ENSMUST00000209008 148 ntBASIC2.47□□□□□ -2.01
Cdx1P18111 Vmn1r-ps50-201ENSMUST00000216908 453 ntBASIC2.47□□□□□ -2.01
Cdx1P18111 AC126673.2-201ENSMUST00000221052 686 ntBASIC2.47□□□□□ -2.01
Cdx1P18111 Gm18363-201ENSMUST00000221671 730 ntBASIC2.47□□□□□ -2.01
Cdx1P18111 1700111E14Rik-201ENSMUST00000031863 908 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
Cdx1P18111 Cd52-201ENSMUST00000000696 514 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
Cdx1P18111 Rps15a-ps1-201ENSMUST00000071120 393 ntBASIC2.47□□□□□ -2.01
Cdx1P18111 Olfr847-201ENSMUST00000079620 939 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
Cdx1P18111 Olfr1446-201ENSMUST00000081236 1044 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
Cdx1P18111 Gm22740-201ENSMUST00000083439 109 ntBASIC2.47□□□□□ -2.01
Cdx1P18111 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Cdx1P18111 Gm43665-201ENSMUST00000198672 1659 ntBASIC2.47□□□□□ -2.01
Cdx1P18111 Gm44562-201ENSMUST00000207194 1347 ntBASIC2.46□□□□□ -2.02
Cdx1P18111 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC2.46□□□□□ -2.02
Cdx1P18111 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
Cdx1P18111 Vmn1r69-201ENSMUST00000163658 2558 ntAPPRIS P2 BASIC2.46□□□□□ -2.02
Cdx1P18111 Smim9-201ENSMUST00000101433 706 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
Cdx1P18111 Gm25313-201ENSMUST00000101817 116 ntBASIC2.46□□□□□ -2.02
Cdx1P18111 Gm24280-201ENSMUST00000104237 134 ntBASIC2.46□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms