Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Vmn1r-ps143-201ENSMUST00000176730 604 ntBASIC2.24□□□□□ -2.05
Col1a1P11087 Mir6405-201ENSMUST00000184584 124 ntBASIC2.24□□□□□ -2.05
Col1a1P11087 Gm11983-202ENSMUST00000184940 318 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
Col1a1P11087 Gm28060-201ENSMUST00000191554 189 ntBASIC2.24□□□□□ -2.05
Col1a1P11087 Trav15d-3-201ENSMUST00000198604 167 ntBASIC2.24□□□□□ -2.05
Col1a1P11087 Trav15n-3-201ENSMUST00000200498 168 ntBASIC2.24□□□□□ -2.05
Col1a1P11087 Olfr1202-203ENSMUST00000217059 1153 ntAPPRIS P1 TSL 3 BASIC2.24□□□□□ -2.05
Col1a1P11087 Vmn2r-ps99-201ENSMUST00000221276 1203 ntTSL 5 BASIC2.24□□□□□ -2.05
Col1a1P11087 Vmn1r17-202ENSMUST00000227966 912 ntAPPRIS P2 BASIC2.24□□□□□ -2.05
Col1a1P11087 Gm24044-201ENSMUST00000083107 156 ntBASIC2.24□□□□□ -2.05
Col1a1P11087 Olfr987-201ENSMUST00000099929 1075 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
Col1a1P11087 Gm43896-201ENSMUST00000203440 2032 ntBASIC2.24□□□□□ -2.05
Col1a1P11087 Olfr594-202ENSMUST00000214051 2809 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
Col1a1P11087 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
Col1a1P11087 Gm33962-201ENSMUST00000182643 2592 ntBASIC2.23□□□□□ -2.05
Col1a1P11087 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Col1a1P11087 Olfr1469-202ENSMUST00000216910 4106 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Col1a1P11087 Gm24096-201ENSMUST00000103905 110 ntBASIC2.23□□□□□ -2.05
Col1a1P11087 Gm13460-201ENSMUST00000121274 353 ntBASIC2.23□□□□□ -2.05
Col1a1P11087 Gm24061-201ENSMUST00000157489 120 ntBASIC2.23□□□□□ -2.05
Col1a1P11087 Gm22083-201ENSMUST00000157586 102 ntBASIC2.23□□□□□ -2.05
Col1a1P11087 Gm22554-201ENSMUST00000157798 147 ntBASIC2.23□□□□□ -2.05
Col1a1P11087 Gm22519-201ENSMUST00000158270 178 ntBASIC2.23□□□□□ -2.05
Col1a1P11087 Gm23583-201ENSMUST00000158533 289 ntBASIC2.23□□□□□ -2.05
Col1a1P11087 Gm26864-201ENSMUST00000181346 156 ntBASIC2.23□□□□□ -2.05
Col1a1P11087 Scgb2b9-ps-201ENSMUST00000189522 334 ntBASIC2.23□□□□□ -2.05
Col1a1P11087 Gm38238-201ENSMUST00000194334 346 ntBASIC2.23□□□□□ -2.05
Col1a1P11087 Gm43198-201ENSMUST00000200927 326 ntBASIC2.23□□□□□ -2.05
Col1a1P11087 AC102435.1-205ENSMUST00000221064 1097 ntTSL 5 BASIC2.23□□□□□ -2.05
Col1a1P11087 Vmn1r25-202ENSMUST00000228585 909 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
Col1a1P11087 Vmn1r72-201ENSMUST00000053134 921 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
Col1a1P11087 Skint10-201ENSMUST00000060327 1376 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
Col1a1P11087 Gm42664-201ENSMUST00000199417 3239 ntBASIC2.23□□□□□ -2.05
Col1a1P11087 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC2.22□□□□□ -2.05
Col1a1P11087 Klra5-204ENSMUST00000169901 792 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
Col1a1P11087 Vmn2r-ps84-201ENSMUST00000173377 897 ntBASIC2.22□□□□□ -2.05
Col1a1P11087 Olfr421-ps1-201ENSMUST00000179386 1050 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
Col1a1P11087 Gm37059-201ENSMUST00000191723 678 ntTSL 5 BASIC2.22□□□□□ -2.05
Col1a1P11087 Gm37692-201ENSMUST00000192633 232 ntBASIC2.22□□□□□ -2.05
Col1a1P11087 Gm36638-201ENSMUST00000193295 400 ntBASIC2.22□□□□□ -2.05
Col1a1P11087 CAAA01216754.4-201ENSMUST00000216416 802 ntTSL 5 BASIC2.22□□□□□ -2.05
Col1a1P11087 Gm18899-201ENSMUST00000217663 546 ntBASIC2.22□□□□□ -2.05
Col1a1P11087 AC151907.1-201ENSMUST00000228812 412 ntBASIC2.22□□□□□ -2.05
Col1a1P11087 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC2.22□□□□□ -2.05
Col1a1P11087 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
Col1a1P11087 AC116557.1-201ENSMUST00000219494 1521 ntBASIC2.22□□□□□ -2.05
Col1a1P11087 Olfr146-203ENSMUST00000214410 1651 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
Col1a1P11087 Gm22761-201ENSMUST00000102278 96 ntBASIC2.21□□□□□ -2.06
Col1a1P11087 Mup-ps14-201ENSMUST00000118437 532 ntBASIC2.21□□□□□ -2.06
Col1a1P11087 Mup-ps2-201ENSMUST00000142602 533 ntBASIC2.21□□□□□ -2.06
Col1a1P11087 Gm24475-201ENSMUST00000157435 143 ntBASIC2.21□□□□□ -2.06
Col1a1P11087 Vmn1r-ps85-201ENSMUST00000173029 890 ntBASIC2.21□□□□□ -2.06
Col1a1P11087 Gm22858-201ENSMUST00000174972 76 ntBASIC2.21□□□□□ -2.06
Col1a1P11087 Gm21170-201ENSMUST00000179330 498 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
Col1a1P11087 Gm28127-201ENSMUST00000185293 622 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
Col1a1P11087 Gm28176-201ENSMUST00000185322 622 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
Col1a1P11087 Gm29210-201ENSMUST00000186332 622 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
Col1a1P11087 Gm28170-201ENSMUST00000186892 622 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
Col1a1P11087 Gm28725-201ENSMUST00000187372 622 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
Col1a1P11087 Gm29655-201ENSMUST00000187728 622 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
Col1a1P11087 Gm28280-201ENSMUST00000188196 622 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
Col1a1P11087 Gm28091-201ENSMUST00000188421 622 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
Col1a1P11087 Gm28850-201ENSMUST00000189058 622 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
Col1a1P11087 Gm28300-202ENSMUST00000189170 622 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
Col1a1P11087 Gm28690-202ENSMUST00000190325 622 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
Col1a1P11087 Gm28456-202ENSMUST00000190521 622 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
Col1a1P11087 Gm28325-202ENSMUST00000191481 622 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
Col1a1P11087 Gm37054-201ENSMUST00000193481 543 ntBASIC2.21□□□□□ -2.06
Col1a1P11087 AC135019.1-201ENSMUST00000219949 307 ntBASIC2.21□□□□□ -2.06
Col1a1P11087 AC173345.3-201ENSMUST00000221245 1093 ntBASIC2.21□□□□□ -2.06
Col1a1P11087 AC164424.1-201ENSMUST00000221690 170 ntBASIC2.21□□□□□ -2.06
Col1a1P11087 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC2.21□□□□□ -2.06
Col1a1P11087 Vmn1r226-201ENSMUST00000061756 897 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
Col1a1P11087 Tas2r130-201ENSMUST00000067597 1090 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
Col1a1P11087 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
Col1a1P11087 Trbv5-201ENSMUST00000103266 368 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Col1a1P11087 Gm11460-201ENSMUST00000118200 361 ntBASIC2.2□□□□□ -2.06
Col1a1P11087 Gm12230-201ENSMUST00000118301 454 ntBASIC2.2□□□□□ -2.06
Col1a1P11087 Gm23505-201ENSMUST00000158989 130 ntBASIC2.2□□□□□ -2.06
Col1a1P11087 Arpp19-211ENSMUST00000170310 899 ntTSL 3 BASIC2.2□□□□□ -2.06
Col1a1P11087 Gm17153-201ENSMUST00000171314 490 ntBASIC2.2□□□□□ -2.06
Col1a1P11087 Gm5900-201ENSMUST00000179862 375 ntBASIC2.2□□□□□ -2.06
Col1a1P11087 Rian-214ENSMUST00000183026 596 ntTSL 5 BASIC2.2□□□□□ -2.06
Col1a1P11087 Gm27979-201ENSMUST00000185126 56 ntBASIC2.2□□□□□ -2.06
Col1a1P11087 Gm28650-201ENSMUST00000188413 411 ntBASIC2.2□□□□□ -2.06
Col1a1P11087 4930558C23Rik-201ENSMUST00000196239 731 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
Col1a1P11087 Gm42474-201ENSMUST00000201073 505 ntBASIC2.2□□□□□ -2.06
Col1a1P11087 Eif3s6-ps4-201ENSMUST00000202873 1388 ntBASIC2.2□□□□□ -2.06
Col1a1P11087 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC2.2□□□□□ -2.06
Col1a1P11087 Gm45130-201ENSMUST00000207574 3388 ntBASIC2.2□□□□□ -2.06
Col1a1P11087 AC117688.1-201ENSMUST00000213142 832 ntTSL 5 BASIC2.2□□□□□ -2.06
Col1a1P11087 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Col1a1P11087 AC122924.2-201ENSMUST00000220799 298 ntBASIC2.2□□□□□ -2.06
Col1a1P11087 mt-Cytb-201ENSMUST00000082421 1144 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Col1a1P11087 Gm22245-201ENSMUST00000082479 103 ntBASIC2.2□□□□□ -2.06
Col1a1P11087 Mir148b-201ENSMUST00000083626 97 ntBASIC2.2□□□□□ -2.06
Col1a1P11087 Olfr1111-201ENSMUST00000099860 940 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Col1a1P11087 Gm44288-201ENSMUST00000205061 2795 ntBASIC2.2□□□□□ -2.06
Col1a1P11087 Gm26080-201ENSMUST00000104069 131 ntBASIC2.2□□□□□ -2.06
Col1a1P11087 Gm11404-201ENSMUST00000120872 494 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 100.7 ms