Protein–RNA interactions for Protein: O55187

Cbx4, E3 SUMO-protein ligase CBX4, mousemouse

Predictions only

Length 551 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx4O55187 Gm22740-201ENSMUST00000083439 109 ntBASIC3.55□□□□□ -1.84
Cbx4O55187 Gm23848-201ENSMUST00000083826 106 ntBASIC3.55□□□□□ -1.84
Cbx4O55187 Ccr2-202ENSMUST00000165984 3515 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Cbx4O55187 Gm28465-202ENSMUST00000220779 1701 ntTSL 5 BASIC3.55□□□□□ -1.84
Cbx4O55187 Gm45809-201ENSMUST00000211661 3894 ntBASIC3.55□□□□□ -1.84
Cbx4O55187 Gm44164-201ENSMUST00000203605 2561 ntBASIC3.55□□□□□ -1.84
Cbx4O55187 Gm45884-201ENSMUST00000209540 3416 ntBASIC3.54□□□□□ -1.84
Cbx4O55187 Vmn1r45-203ENSMUST00000227122 2861 ntBASIC3.54□□□□□ -1.84
Cbx4O55187 Trav7n-4-201ENSMUST00000103609 341 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Cbx4O55187 Gm24581-201ENSMUST00000103962 133 ntBASIC3.54□□□□□ -1.84
Cbx4O55187 Gm14558-201ENSMUST00000117458 381 ntBASIC3.54□□□□□ -1.84
Cbx4O55187 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC3.54□□□□□ -1.84
Cbx4O55187 Gm14049-201ENSMUST00000121009 636 ntBASIC3.54□□□□□ -1.84
Cbx4O55187 Gm12578-201ENSMUST00000121244 417 ntBASIC3.54□□□□□ -1.84
Cbx4O55187 Rps13-ps7-201ENSMUST00000122045 368 ntBASIC3.54□□□□□ -1.84
Cbx4O55187 n-R5s68-201ENSMUST00000122639 82 ntBASIC3.54□□□□□ -1.84
Cbx4O55187 Gm11479-201ENSMUST00000134275 387 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Cbx4O55187 Gm15461-201ENSMUST00000143488 235 ntTSL 3 BASIC3.54□□□□□ -1.84
Cbx4O55187 AI847159-204ENSMUST00000148997 753 ntTSL 3 BASIC3.54□□□□□ -1.84
Cbx4O55187 Gm25224-201ENSMUST00000158195 68 ntBASIC3.54□□□□□ -1.84
Cbx4O55187 Gm16567-201ENSMUST00000160967 576 ntTSL 5 BASIC3.54□□□□□ -1.84
Cbx4O55187 Gm29009-201ENSMUST00000186340 496 ntTSL 5 BASIC3.54□□□□□ -1.84
Cbx4O55187 Gm20832-201ENSMUST00000189076 665 ntBASIC3.54□□□□□ -1.84
Cbx4O55187 Gm18291-201ENSMUST00000190791 301 ntBASIC3.54□□□□□ -1.84
Cbx4O55187 Gm37692-201ENSMUST00000192633 232 ntBASIC3.54□□□□□ -1.84
Cbx4O55187 Gm30638-201ENSMUST00000195570 656 ntBASIC3.54□□□□□ -1.84
Cbx4O55187 Gm36728-201ENSMUST00000195782 665 ntBASIC3.54□□□□□ -1.84
Cbx4O55187 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC3.54□□□□□ -1.84
Cbx4O55187 Gm7652-201ENSMUST00000200440 1151 ntBASIC3.54□□□□□ -1.84
Cbx4O55187 Gm45400-201ENSMUST00000211603 653 ntBASIC3.54□□□□□ -1.84
Cbx4O55187 Olfr175-ps1-202ENSMUST00000215069 1201 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Cbx4O55187 AC165366.1-201ENSMUST00000225905 505 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Cbx4O55187 AC116656.1-201ENSMUST00000227040 755 ntBASIC3.54□□□□□ -1.84
Cbx4O55187 Ly6a-201ENSMUST00000023248 819 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Cbx4O55187 Olfr308-201ENSMUST00000044256 1056 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Cbx4O55187 Olfr175-ps1-201ENSMUST00000079955 1169 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
Cbx4O55187 Defb4-201ENSMUST00000081017 454 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Cbx4O55187 Gm23242-201ENSMUST00000083055 107 ntBASIC3.54□□□□□ -1.84
Cbx4O55187 Gm24611-201ENSMUST00000083272 107 ntBASIC3.54□□□□□ -1.84
Cbx4O55187 Neb-203ENSMUST00000075301 21456 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
Cbx4O55187 C87414-206ENSMUST00000162964 2852 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
Cbx4O55187 Gm34549-201ENSMUST00000207057 1611 ntTSL 5 BASIC3.54□□□□□ -1.84
Cbx4O55187 Gm43896-201ENSMUST00000203440 2032 ntBASIC3.54□□□□□ -1.84
Cbx4O55187 Olfr1484-202ENSMUST00000208104 3621 ntTSL 2 BASIC3.54□□□□□ -1.84
Cbx4O55187 Olfr1484-206ENSMUST00000217451 3628 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Cbx4O55187 Gm37879-201ENSMUST00000193112 1995 ntBASIC3.54□□□□□ -1.84
Cbx4O55187 Vmn1r66-205ENSMUST00000228622 3304 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Cbx4O55187 Olfr548-ps1-202ENSMUST00000210064 4287 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Cbx4O55187 Klra2-201ENSMUST00000032306 1799 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
Cbx4O55187 AC155830.1-201ENSMUST00000220050 3836 ntBASIC3.53□□□□□ -1.84
Cbx4O55187 Gm25833-201ENSMUST00000104137 133 ntBASIC3.53□□□□□ -1.84
Cbx4O55187 Vmn1r121-201ENSMUST00000105197 945 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Cbx4O55187 Gm10972-201ENSMUST00000107276 81 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Cbx4O55187 Rpl10-ps4-201ENSMUST00000117120 286 ntBASIC3.53□□□□□ -1.84
Cbx4O55187 Gm14624-201ENSMUST00000117746 192 ntBASIC3.53□□□□□ -1.84
Cbx4O55187 Sval2-201ENSMUST00000014248 585 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Cbx4O55187 4930401O12Rik-201ENSMUST00000153175 841 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Cbx4O55187 Gm22059-201ENSMUST00000157544 104 ntBASIC3.53□□□□□ -1.84
Cbx4O55187 Gm23078-201ENSMUST00000157848 148 ntBASIC3.53□□□□□ -1.84
Cbx4O55187 Gm24724-201ENSMUST00000158230 107 ntBASIC3.53□□□□□ -1.84
Cbx4O55187 Gm4175-201ENSMUST00000172863 945 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Cbx4O55187 Gm27903-201ENSMUST00000175482 126 ntBASIC3.53□□□□□ -1.84
Cbx4O55187 Clec5a-204ENSMUST00000177178 665 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
Cbx4O55187 Gm22290-201ENSMUST00000177655 107 ntBASIC3.53□□□□□ -1.84
Cbx4O55187 Gm22583-201ENSMUST00000178031 107 ntBASIC3.53□□□□□ -1.84
Cbx4O55187 Gm7656-201ENSMUST00000182468 1004 ntBASIC3.53□□□□□ -1.84
Cbx4O55187 Gm27445-201ENSMUST00000184484 72 ntBASIC3.53□□□□□ -1.84
Cbx4O55187 Gm27760-201ENSMUST00000185048 114 ntBASIC3.53□□□□□ -1.84
Cbx4O55187 Gm28163-201ENSMUST00000187099 325 ntBASIC3.53□□□□□ -1.84
Cbx4O55187 Mrgprb1-202ENSMUST00000188095 472 ntTSL 3 BASIC3.53□□□□□ -1.84
Cbx4O55187 Gm28337-201ENSMUST00000190425 666 ntBASIC3.53□□□□□ -1.84
Cbx4O55187 Gm36866-201ENSMUST00000193343 657 ntBASIC3.53□□□□□ -1.84
Cbx4O55187 Gm36047-201ENSMUST00000193659 657 ntBASIC3.53□□□□□ -1.84
Cbx4O55187 Ighv1-40-201ENSMUST00000194231 345 ntBASIC3.53□□□□□ -1.84
Cbx4O55187 Gm20857-201ENSMUST00000194766 657 ntBASIC3.53□□□□□ -1.84
Cbx4O55187 Gm20858-201ENSMUST00000195459 657 ntBASIC3.53□□□□□ -1.84
Cbx4O55187 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC3.53□□□□□ -1.84
Cbx4O55187 Olfr1401-ps1-201ENSMUST00000202296 211 ntBASIC3.53□□□□□ -1.84
Cbx4O55187 Gm44274-201ENSMUST00000203417 256 ntBASIC3.53□□□□□ -1.84
Cbx4O55187 Gm7624-201ENSMUST00000209702 435 ntBASIC3.53□□□□□ -1.84
Cbx4O55187 Gm34779-201ENSMUST00000210036 263 ntBASIC3.53□□□□□ -1.84
Cbx4O55187 Olfr908-201ENSMUST00000215139 932 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Cbx4O55187 AC069561.2-201ENSMUST00000217596 420 ntBASIC3.53□□□□□ -1.84
Cbx4O55187 AC122393.1-201ENSMUST00000226570 319 ntBASIC3.53□□□□□ -1.84
Cbx4O55187 AC123656.2-201ENSMUST00000226726 227 ntBASIC3.53□□□□□ -1.84
Cbx4O55187 AC118639.1-201ENSMUST00000227204 338 ntBASIC3.53□□□□□ -1.84
Cbx4O55187 AC120553.1-201ENSMUST00000227313 260 ntBASIC3.53□□□□□ -1.84
Cbx4O55187 Ear14-201ENSMUST00000049559 468 ntBASIC3.53□□□□□ -1.84
Cbx4O55187 4930512M02Rik-201ENSMUST00000081896 715 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Cbx4O55187 Olfr1043-204ENSMUST00000216028 1824 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Cbx4O55187 CT010444.1-201ENSMUST00000219963 3845 ntBASIC3.53□□□□□ -1.84
Cbx4O55187 AC158805.1-201ENSMUST00000218197 2631 ntBASIC3.53□□□□□ -1.84
Cbx4O55187 Gm45389-201ENSMUST00000211163 3399 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
Cbx4O55187 Vmn2r38-201ENSMUST00000108554 3663 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Cbx4O55187 Gm3095-201ENSMUST00000164696 1568 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Cbx4O55187 Gm24273-201ENSMUST00000102332 164 ntBASIC3.52□□□□□ -1.85
Cbx4O55187 Gm14570-201ENSMUST00000119444 391 ntBASIC3.52□□□□□ -1.85
Cbx4O55187 Gm11704-201ENSMUST00000120031 214 ntBASIC3.52□□□□□ -1.85
Cbx4O55187 Gm12640-201ENSMUST00000120097 310 ntBASIC3.52□□□□□ -1.85
Cbx4O55187 Gm16005-201ENSMUST00000120515 269 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 158.2 ms