Protein–RNA interactions for Protein: O55017

Cacna1b, Voltage-dependent N-type calcium channel subunit alpha-1B, mousemouse

Predictions only

Length 2,327 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1bO55017 Gm29315-201ENSMUST00000185844 622 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
Cacna1bO55017 Gm29210-201ENSMUST00000186332 622 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
Cacna1bO55017 Gm28170-201ENSMUST00000186892 622 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
Cacna1bO55017 Gm28725-201ENSMUST00000187372 622 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
Cacna1bO55017 Gm29655-201ENSMUST00000187728 622 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
Cacna1bO55017 Gm28280-201ENSMUST00000188196 622 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
Cacna1bO55017 Gm28091-201ENSMUST00000188421 622 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
Cacna1bO55017 Gm28300-202ENSMUST00000189170 622 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
Cacna1bO55017 Gm28745-201ENSMUST00000190069 305 ntBASIC1.86□□□□□ -2.11
Cacna1bO55017 Gm28690-202ENSMUST00000190325 622 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
Cacna1bO55017 Gm28456-202ENSMUST00000190521 622 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
Cacna1bO55017 Gm28325-202ENSMUST00000191481 622 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
Cacna1bO55017 Gm36467-202ENSMUST00000195606 622 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
Cacna1bO55017 Obox4-ps24-201ENSMUST00000197686 540 ntBASIC1.86□□□□□ -2.11
Cacna1bO55017 AC153975.1-201ENSMUST00000220087 926 ntBASIC1.86□□□□□ -2.11
Cacna1bO55017 Tas2r123-201ENSMUST00000071696 1002 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
Cacna1bO55017 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC1.86□□□□□ -2.11
Cacna1bO55017 Fau-ps1-201ENSMUST00000119675 252 ntBASIC1.85□□□□□ -2.11
Cacna1bO55017 Gm27044-201ENSMUST00000183033 796 ntBASIC1.85□□□□□ -2.11
Cacna1bO55017 Gm7182-201ENSMUST00000193351 732 ntBASIC1.85□□□□□ -2.11
Cacna1bO55017 Gm45639-201ENSMUST00000211205 710 ntTSL 5 BASIC1.85□□□□□ -2.11
Cacna1bO55017 AC107808.1-201ENSMUST00000213260 386 ntTSL 3 BASIC1.85□□□□□ -2.11
Cacna1bO55017 AC171204.1-201ENSMUST00000215867 975 ntTSL 5 BASIC1.85□□□□□ -2.11
Cacna1bO55017 AC101984.1-201ENSMUST00000219639 402 ntBASIC1.85□□□□□ -2.11
Cacna1bO55017 CT030187.1-201ENSMUST00000220605 252 ntBASIC1.85□□□□□ -2.11
Cacna1bO55017 Gm9472-201ENSMUST00000221625 526 ntBASIC1.85□□□□□ -2.11
Cacna1bO55017 Gm2544-201ENSMUST00000222702 756 ntBASIC1.85□□□□□ -2.11
Cacna1bO55017 Olfr1466-201ENSMUST00000075868 933 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Cacna1bO55017 Vmn1r52-201ENSMUST00000079832 930 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Cacna1bO55017 Olfr715b-201ENSMUST00000081044 948 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Cacna1bO55017 Gm10212-201ENSMUST00000087884 324 ntBASIC1.85□□□□□ -2.11
Cacna1bO55017 Gm38104-201ENSMUST00000195121 1895 ntBASIC1.85□□□□□ -2.11
Cacna1bO55017 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Cacna1bO55017 Gm37788-201ENSMUST00000193958 2705 ntBASIC1.85□□□□□ -2.11
Cacna1bO55017 Ms4a2-204ENSMUST00000186978 2391 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
Cacna1bO55017 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
Cacna1bO55017 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC1.85□□□□□ -2.11
Cacna1bO55017 Olfr1355-201ENSMUST00000078414 3317 ntAPPRIS P1 TSL 2 BASIC1.85□□□□□ -2.11
Cacna1bO55017 Gm26301-201ENSMUST00000104813 95 ntBASIC1.85□□□□□ -2.11
Cacna1bO55017 4933413L06Rik-202ENSMUST00000111588 922 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
Cacna1bO55017 Mup-ps21-201ENSMUST00000119998 448 ntBASIC1.85□□□□□ -2.11
Cacna1bO55017 Gm14229-201ENSMUST00000121178 850 ntBASIC1.85□□□□□ -2.11
Cacna1bO55017 Gm14559-201ENSMUST00000121745 496 ntBASIC1.85□□□□□ -2.11
Cacna1bO55017 Gm27527-201ENSMUST00000183903 99 ntBASIC1.85□□□□□ -2.11
Cacna1bO55017 Gm29281-201ENSMUST00000188077 381 ntBASIC1.85□□□□□ -2.11
Cacna1bO55017 Gm38171-201ENSMUST00000195716 478 ntTSL 3 BASIC1.85□□□□□ -2.11
Cacna1bO55017 Klra13-ps-204ENSMUST00000205252 640 ntTSL 3 BASIC1.85□□□□□ -2.11
Cacna1bO55017 AC113204.1-202ENSMUST00000219846 578 ntTSL 3 BASIC1.85□□□□□ -2.11
Cacna1bO55017 CT030254.3-201ENSMUST00000225959 1231 ntBASIC1.85□□□□□ -2.11
Cacna1bO55017 AC126690.1-201ENSMUST00000228898 397 ntBASIC1.85□□□□□ -2.11
Cacna1bO55017 Vmn1r237-201ENSMUST00000077301 950 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Cacna1bO55017 Ube2v2-201ENSMUST00000096234 609 ntTSL 3 BASIC1.85□□□□□ -2.11
Cacna1bO55017 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC1.85□□□□□ -2.11
Cacna1bO55017 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Cacna1bO55017 Gm44288-201ENSMUST00000205061 2795 ntBASIC1.84□□□□□ -2.11
Cacna1bO55017 Vmn1r82-203ENSMUST00000227672 3651 ntBASIC1.84□□□□□ -2.11
Cacna1bO55017 Gm14469-201ENSMUST00000118363 202 ntBASIC1.84□□□□□ -2.11
Cacna1bO55017 Vmn1r88-201ENSMUST00000171783 951 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
Cacna1bO55017 Vmn2r-ps121-201ENSMUST00000176230 802 ntBASIC1.84□□□□□ -2.11
Cacna1bO55017 Vmn1r25-201ENSMUST00000176572 1101 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
Cacna1bO55017 Gm43669-201ENSMUST00000198229 436 ntBASIC1.84□□□□□ -2.11
Cacna1bO55017 Gm43911-201ENSMUST00000203097 76 ntBASIC1.84□□□□□ -2.11
Cacna1bO55017 Gm45072-201ENSMUST00000208673 929 ntBASIC1.84□□□□□ -2.11
Cacna1bO55017 Olfr1052-201ENSMUST00000054746 940 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
Cacna1bO55017 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
Cacna1bO55017 Aspn-202ENSMUST00000177948 2329 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
Cacna1bO55017 Gm38071-201ENSMUST00000195792 3378 ntBASIC1.84□□□□□ -2.12
Cacna1bO55017 Prl8a2-202ENSMUST00000110363 922 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.12
Cacna1bO55017 Gm15148-201ENSMUST00000117602 156 ntBASIC1.84□□□□□ -2.12
Cacna1bO55017 Vmn2r-ps114-201ENSMUST00000177016 1280 ntBASIC1.84□□□□□ -2.12
Cacna1bO55017 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC1.84□□□□□ -2.12
Cacna1bO55017 Gm43626-201ENSMUST00000198575 162 ntBASIC1.84□□□□□ -2.12
Cacna1bO55017 Gm44072-201ENSMUST00000203666 383 ntTSL 3 BASIC1.84□□□□□ -2.12
Cacna1bO55017 Olfr188-ps1-202ENSMUST00000220235 925 ntBASIC1.84□□□□□ -2.12
Cacna1bO55017 Smr2-201ENSMUST00000087043 676 ntAPPRIS P3 TSL 1 (best) BASIC1.84□□□□□ -2.12
Cacna1bO55017 Mir301b-201ENSMUST00000102333 97 ntBASIC1.83□□□□□ -2.12
Cacna1bO55017 Gm25090-201ENSMUST00000104000 132 ntBASIC1.83□□□□□ -2.12
Cacna1bO55017 Gm14885-201ENSMUST00000117969 496 ntBASIC1.83□□□□□ -2.12
Cacna1bO55017 Gm11983-202ENSMUST00000184940 318 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
Cacna1bO55017 Gm37850-201ENSMUST00000194573 549 ntTSL 5 BASIC1.83□□□□□ -2.12
Cacna1bO55017 Olfr966-ps1-201ENSMUST00000214875 577 ntBASIC1.83□□□□□ -2.12
Cacna1bO55017 A430103D13Rik-201ENSMUST00000220077 857 ntBASIC1.83□□□□□ -2.12
Cacna1bO55017 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC1.83□□□□□ -2.12
Cacna1bO55017 AC153646.1-201ENSMUST00000223229 1279 ntBASIC1.83□□□□□ -2.12
Cacna1bO55017 AC129308.2-201ENSMUST00000224588 789 ntBASIC1.83□□□□□ -2.12
Cacna1bO55017 AC163646.2-201ENSMUST00000227962 141 ntBASIC1.83□□□□□ -2.12
Cacna1bO55017 AC151907.1-201ENSMUST00000228812 412 ntBASIC1.83□□□□□ -2.12
Cacna1bO55017 Gm25520-201ENSMUST00000158389 118 ntBASIC1.83□□□□□ -2.12
Cacna1bO55017 Gm23633-201ENSMUST00000175293 119 ntBASIC1.83□□□□□ -2.12
Cacna1bO55017 Gm44011-201ENSMUST00000203336 394 ntBASIC1.83□□□□□ -2.12
Cacna1bO55017 Olfr490-201ENSMUST00000210114 945 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
Cacna1bO55017 AC152979.2-201ENSMUST00000219702 3814 ntBASIC1.83□□□□□ -2.12
Cacna1bO55017 AC122393.1-201ENSMUST00000226570 319 ntBASIC1.83□□□□□ -2.12
Cacna1bO55017 Gm26226-201ENSMUST00000082509 116 ntBASIC1.83□□□□□ -2.12
Cacna1bO55017 AC154681.1-201ENSMUST00000225876 1735 ntBASIC1.82□□□□□ -2.12
Cacna1bO55017 Gm7145-201ENSMUST00000185381 1794 ntAPPRIS P1 TSL 3 BASIC1.82□□□□□ -2.12
Cacna1bO55017 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Cacna1bO55017 Gm14588-201ENSMUST00000119895 172 ntBASIC1.82□□□□□ -2.12
Cacna1bO55017 Far1os-201ENSMUST00000138253 893 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
Cacna1bO55017 Gm15689-201ENSMUST00000160604 1159 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 84.5 ms