Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 5330434G04Rik-203ENSMUST00000142109 3449 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Pcdhb9E9Q5G2 Strbp-201ENSMUST00000028279 16348 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Pcdhb9E9Q5G2 Vmn1r71-207ENSMUST00000228248 5469 ntAPPRIS P2 BASIC3.64□□□□□ -1.83
Pcdhb9E9Q5G2 Vmn2r106-201ENSMUST00000167464 2589 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Pcdhb9E9Q5G2 Depdc1a-201ENSMUST00000029825 2920 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Pcdhb9E9Q5G2 Gm44789-201ENSMUST00000207195 3101 ntBASIC3.64□□□□□ -1.83
Pcdhb9E9Q5G2 Olfr65-201ENSMUST00000106864 2648 ntAPPRIS ALT1 TSL 5 BASIC3.64□□□□□ -1.83
Pcdhb9E9Q5G2 Gm29674-202ENSMUST00000219664 4083 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Pcdhb9E9Q5G2 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Pcdhb9E9Q5G2 6720427I07Rik-201ENSMUST00000181490 2300 ntBASIC3.64□□□□□ -1.83
Pcdhb9E9Q5G2 Gm42547-201ENSMUST00000201159 3798 ntBASIC3.64□□□□□ -1.83
Pcdhb9E9Q5G2 Mir19b-1-201ENSMUST00000102301 87 ntBASIC3.64□□□□□ -1.83
Pcdhb9E9Q5G2 Gm15087-201ENSMUST00000117465 1172 ntBASIC3.64□□□□□ -1.83
Pcdhb9E9Q5G2 Gm12509-201ENSMUST00000118033 609 ntBASIC3.64□□□□□ -1.83
Pcdhb9E9Q5G2 Gm13349-201ENSMUST00000118436 411 ntBASIC3.64□□□□□ -1.83
Pcdhb9E9Q5G2 Gm11219-201ENSMUST00000118565 358 ntBASIC3.64□□□□□ -1.83
Pcdhb9E9Q5G2 Gm11321-201ENSMUST00000121257 902 ntBASIC3.64□□□□□ -1.83
Pcdhb9E9Q5G2 Gm14426-201ENSMUST00000128562 249 ntTSL 3 BASIC3.64□□□□□ -1.83
Pcdhb9E9Q5G2 4930527E20Rik-201ENSMUST00000135700 351 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Pcdhb9E9Q5G2 Gm22322-201ENSMUST00000157151 111 ntBASIC3.64□□□□□ -1.83
Pcdhb9E9Q5G2 Gm23391-201ENSMUST00000157579 104 ntBASIC3.64□□□□□ -1.83
Pcdhb9E9Q5G2 Gm25490-201ENSMUST00000158734 130 ntBASIC3.64□□□□□ -1.83
Pcdhb9E9Q5G2 Vmn1r-ps27-201ENSMUST00000174619 985 ntBASIC3.64□□□□□ -1.83
Pcdhb9E9Q5G2 Gm18520-201ENSMUST00000174783 658 ntBASIC3.64□□□□□ -1.83
Pcdhb9E9Q5G2 Vmn1r-ps150-201ENSMUST00000176659 736 ntBASIC3.64□□□□□ -1.83
Pcdhb9E9Q5G2 Vmn1r-ps149-201ENSMUST00000176997 183 ntBASIC3.64□□□□□ -1.83
Pcdhb9E9Q5G2 Gm9944-201ENSMUST00000177649 309 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Pcdhb9E9Q5G2 Gm23568-201ENSMUST00000177960 92 ntBASIC3.64□□□□□ -1.83
Pcdhb9E9Q5G2 Gm26177-201ENSMUST00000178683 107 ntBASIC3.64□□□□□ -1.83
Pcdhb9E9Q5G2 Gm24829-201ENSMUST00000179245 92 ntBASIC3.64□□□□□ -1.83
Pcdhb9E9Q5G2 Gm28347-201ENSMUST00000185380 382 ntTSL 2 BASIC3.64□□□□□ -1.83
Pcdhb9E9Q5G2 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC3.64□□□□□ -1.83
Pcdhb9E9Q5G2 Gm29576-201ENSMUST00000188020 678 ntBASIC3.64□□□□□ -1.83
Pcdhb9E9Q5G2 Gm28354-201ENSMUST00000190904 678 ntBASIC3.64□□□□□ -1.83
Pcdhb9E9Q5G2 4921527H02Rik-202ENSMUST00000196005 947 ntBASIC3.64□□□□□ -1.83
Pcdhb9E9Q5G2 D030025E07Rik-205ENSMUST00000198478 418 ntTSL 3 BASIC3.64□□□□□ -1.83
Pcdhb9E9Q5G2 Eif4e-205ENSMUST00000200100 729 ntTSL 3 BASIC3.64□□□□□ -1.83
Pcdhb9E9Q5G2 Gm34091-201ENSMUST00000200875 604 ntBASIC3.64□□□□□ -1.83
Pcdhb9E9Q5G2 AL772265.1-201ENSMUST00000214379 305 ntBASIC3.64□□□□□ -1.83
Pcdhb9E9Q5G2 AC112274.2-201ENSMUST00000218436 170 ntBASIC3.64□□□□□ -1.83
Pcdhb9E9Q5G2 AC127371.1-202ENSMUST00000228923 306 ntBASIC3.64□□□□□ -1.83
Pcdhb9E9Q5G2 Stfa1-201ENSMUST00000042097 418 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Pcdhb9E9Q5G2 Gm24490-201ENSMUST00000083803 98 ntBASIC3.64□□□□□ -1.83
Pcdhb9E9Q5G2 Gm10267-201ENSMUST00000091916 258 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
Pcdhb9E9Q5G2 Npy6r-201ENSMUST00000042747 2567 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Pcdhb9E9Q5G2 Mgat4c-212ENSMUST00000179929 4272 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Pcdhb9E9Q5G2 Olfr346-202ENSMUST00000213258 4104 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Pcdhb9E9Q5G2 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC3.63□□□□□ -1.83
Pcdhb9E9Q5G2 Gm11284-201ENSMUST00000121910 1887 ntBASIC3.63□□□□□ -1.83
Pcdhb9E9Q5G2 Gm23256-201ENSMUST00000102235 110 ntBASIC3.63□□□□□ -1.83
Pcdhb9E9Q5G2 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Pcdhb9E9Q5G2 Gm26140-201ENSMUST00000103807 110 ntBASIC3.63□□□□□ -1.83
Pcdhb9E9Q5G2 Gm24120-201ENSMUST00000103978 129 ntBASIC3.63□□□□□ -1.83
Pcdhb9E9Q5G2 Gm25560-201ENSMUST00000104606 176 ntBASIC3.63□□□□□ -1.83
Pcdhb9E9Q5G2 Gm14406-201ENSMUST00000108943 531 ntTSL 2 BASIC3.63□□□□□ -1.83
Pcdhb9E9Q5G2 Gm15113-201ENSMUST00000119280 836 ntBASIC3.63□□□□□ -1.83
Pcdhb9E9Q5G2 Gm25318-201ENSMUST00000122554 314 ntBASIC3.63□□□□□ -1.83
Pcdhb9E9Q5G2 Gm16157-201ENSMUST00000124813 534 ntTSL 3 BASIC3.63□□□□□ -1.83
Pcdhb9E9Q5G2 Vmn1r-ps61-201ENSMUST00000173771 822 ntBASIC3.63□□□□□ -1.83
Pcdhb9E9Q5G2 Gm24811-201ENSMUST00000175313 100 ntBASIC3.63□□□□□ -1.83
Pcdhb9E9Q5G2 Clec5a-204ENSMUST00000177178 665 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
Pcdhb9E9Q5G2 Gm22908-201ENSMUST00000177620 110 ntBASIC3.63□□□□□ -1.83
Pcdhb9E9Q5G2 Gm24520-201ENSMUST00000179510 110 ntBASIC3.63□□□□□ -1.83
Pcdhb9E9Q5G2 Gm11392-201ENSMUST00000181419 710 ntBASIC3.63□□□□□ -1.83
Pcdhb9E9Q5G2 Gm27477-201ENSMUST00000184649 143 ntBASIC3.63□□□□□ -1.83
Pcdhb9E9Q5G2 Gm28474-201ENSMUST00000188501 315 ntBASIC3.63□□□□□ -1.83
Pcdhb9E9Q5G2 1700025M24Rik-203ENSMUST00000191524 725 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Pcdhb9E9Q5G2 Gm36831-201ENSMUST00000196485 631 ntTSL 2 BASIC3.63□□□□□ -1.83
Pcdhb9E9Q5G2 Gm43043-201ENSMUST00000196579 412 ntBASIC3.63□□□□□ -1.83
Pcdhb9E9Q5G2 Gm44125-201ENSMUST00000203068 448 ntBASIC3.63□□□□□ -1.83
Pcdhb9E9Q5G2 Gm7946-201ENSMUST00000203326 958 ntBASIC3.63□□□□□ -1.83
Pcdhb9E9Q5G2 Gm44133-201ENSMUST00000203823 701 ntTSL 2 BASIC3.63□□□□□ -1.83
Pcdhb9E9Q5G2 Olfr778-ps1-201ENSMUST00000204517 207 ntBASIC3.63□□□□□ -1.83
Pcdhb9E9Q5G2 Gm45868-201ENSMUST00000210247 473 ntTSL 3 BASIC3.63□□□□□ -1.83
Pcdhb9E9Q5G2 Gm18252-201ENSMUST00000214814 527 ntTSL 5 BASIC3.63□□□□□ -1.83
Pcdhb9E9Q5G2 Olfr908-201ENSMUST00000215139 932 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Pcdhb9E9Q5G2 Olfr1005-ps1-201ENSMUST00000216207 488 ntBASIC3.63□□□□□ -1.83
Pcdhb9E9Q5G2 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC3.63□□□□□ -1.83
Pcdhb9E9Q5G2 AC156560.1-201ENSMUST00000221425 256 ntBASIC3.63□□□□□ -1.83
Pcdhb9E9Q5G2 AC138667.2-201ENSMUST00000224880 598 ntBASIC3.63□□□□□ -1.83
Pcdhb9E9Q5G2 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Pcdhb9E9Q5G2 Vmn1r75-201ENSMUST00000057229 918 ntAPPRIS P2 BASIC3.63□□□□□ -1.83
Pcdhb9E9Q5G2 Olfr885-201ENSMUST00000081985 930 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Pcdhb9E9Q5G2 Gm22304-201ENSMUST00000082688 129 ntBASIC3.63□□□□□ -1.83
Pcdhb9E9Q5G2 Olfr561-201ENSMUST00000098217 1071 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Pcdhb9E9Q5G2 Olfr1467-202ENSMUST00000215096 3671 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Pcdhb9E9Q5G2 Olfr799-204ENSMUST00000216446 1513 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Pcdhb9E9Q5G2 B020011L13Rik-201ENSMUST00000188801 2879 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
Pcdhb9E9Q5G2 Gm37848-201ENSMUST00000195288 3103 ntBASIC3.63□□□□□ -1.83
Pcdhb9E9Q5G2 Olfr1434-201ENSMUST00000207186 2714 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
Pcdhb9E9Q5G2 Gm45662-201ENSMUST00000210054 2098 ntBASIC3.63□□□□□ -1.83
Pcdhb9E9Q5G2 Vmn2r108-201ENSMUST00000167314 2568 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Pcdhb9E9Q5G2 C130023A14Rik-201ENSMUST00000193537 3087 ntBASIC3.62□□□□□ -1.83
Pcdhb9E9Q5G2 Olfr796-202ENSMUST00000214584 3554 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
Pcdhb9E9Q5G2 Gm45038-201ENSMUST00000207537 3838 ntBASIC3.62□□□□□ -1.83
Pcdhb9E9Q5G2 Gm7135-202ENSMUST00000191257 1905 ntBASIC3.62□□□□□ -1.83
Pcdhb9E9Q5G2 Ccdc18-201ENSMUST00000047677 5336 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Pcdhb9E9Q5G2 Fam81b-201ENSMUST00000208418 2760 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Pcdhb9E9Q5G2 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC3.62□□□□□ -1.83
Pcdhb9E9Q5G2 Vmn1r-ps127-201ENSMUST00000118007 478 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 82.9 ms