Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm14020-201ENSMUST00000118165 662 ntBASIC1.86□□□□□ -2.11
Col6a3E9PWQ3 Gm15115-201ENSMUST00000121145 264 ntBASIC1.86□□□□□ -2.11
Col6a3E9PWQ3 Gm23328-201ENSMUST00000157418 132 ntBASIC1.86□□□□□ -2.11
Col6a3E9PWQ3 Rian-211ENSMUST00000182737 699 ntTSL 3 BASIC1.86□□□□□ -2.11
Col6a3E9PWQ3 AC183096.2-201ENSMUST00000228733 457 ntBASIC1.86□□□□□ -2.11
Col6a3E9PWQ3 Gm10794-201ENSMUST00000099624 207 ntBASIC1.86□□□□□ -2.11
Col6a3E9PWQ3 Gm43326-201ENSMUST00000198459 1638 ntBASIC1.86□□□□□ -2.11
Col6a3E9PWQ3 Olfr1313-203ENSMUST00000216071 2599 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
Col6a3E9PWQ3 Olfr794-202ENSMUST00000204820 3044 ntAPPRIS P1 TSL 2 BASIC1.86□□□□□ -2.11
Col6a3E9PWQ3 Olfr887-202ENSMUST00000212502 6281 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
Col6a3E9PWQ3 Olfr421-ps1-201ENSMUST00000179386 1050 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
Col6a3E9PWQ3 Gm37892-201ENSMUST00000192018 437 ntTSL 3 BASIC1.86□□□□□ -2.11
Col6a3E9PWQ3 Gm44052-201ENSMUST00000203382 396 ntBASIC1.86□□□□□ -2.11
Col6a3E9PWQ3 Olfr1140-201ENSMUST00000214723 1421 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
Col6a3E9PWQ3 Gm14404-201ENSMUST00000119117 1660 ntBASIC1.86□□□□□ -2.11
Col6a3E9PWQ3 Vmn1r72-202ENSMUST00000209638 6501 ntAPPRIS P1 TSL 3 BASIC1.85□□□□□ -2.11
Col6a3E9PWQ3 Scgb2b12-201ENSMUST00000183195 511 ntAPPRIS P1 TSL 2 BASIC1.85□□□□□ -2.11
Col6a3E9PWQ3 1700041C23Rik-201ENSMUST00000185243 395 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
Col6a3E9PWQ3 Olfr1008-201ENSMUST00000054868 942 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Col6a3E9PWQ3 5930409G06Rik-201ENSMUST00000192347 1544 ntBASIC1.85□□□□□ -2.11
Col6a3E9PWQ3 Spata31-201ENSMUST00000070216 3232 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Col6a3E9PWQ3 Tlr3-202ENSMUST00000167106 4093 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Col6a3E9PWQ3 Mir693-201ENSMUST00000102187 89 ntBASIC1.85□□□□□ -2.11
Col6a3E9PWQ3 Gm11268-201ENSMUST00000118347 267 ntBASIC1.85□□□□□ -2.11
Col6a3E9PWQ3 AC117232.1-201ENSMUST00000197964 119 ntBASIC1.85□□□□□ -2.11
Col6a3E9PWQ3 Gm43415-201ENSMUST00000201934 750 ntBASIC1.85□□□□□ -2.11
Col6a3E9PWQ3 AC107808.2-201ENSMUST00000213542 1027 ntTSL 5 BASIC1.85□□□□□ -2.11
Col6a3E9PWQ3 Vmn1r77-203ENSMUST00000227320 8308 ntAPPRIS P2 BASIC1.85□□□□□ -2.11
Col6a3E9PWQ3 Gm43373-201ENSMUST00000202552 2870 ntBASIC1.85□□□□□ -2.11
Col6a3E9PWQ3 Gm9732-201ENSMUST00000111874 492 ntAPPRIS ALT2 TSL 5 BASIC1.85□□□□□ -2.11
Col6a3E9PWQ3 Gm24381-201ENSMUST00000122697 104 ntBASIC1.85□□□□□ -2.11
Col6a3E9PWQ3 Gm23223-201ENSMUST00000158119 127 ntBASIC1.85□□□□□ -2.11
Col6a3E9PWQ3 Gm26178-201ENSMUST00000177706 107 ntBASIC1.85□□□□□ -2.11
Col6a3E9PWQ3 Gm23151-201ENSMUST00000178061 107 ntBASIC1.85□□□□□ -2.11
Col6a3E9PWQ3 Gm21409-201ENSMUST00000186110 923 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Col6a3E9PWQ3 Gm29007-201ENSMUST00000190633 679 ntTSL 5 BASIC1.85□□□□□ -2.11
Col6a3E9PWQ3 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC1.85□□□□□ -2.11
Col6a3E9PWQ3 Gm45173-201ENSMUST00000206819 305 ntBASIC1.85□□□□□ -2.11
Col6a3E9PWQ3 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
Col6a3E9PWQ3 Gm23991-201ENSMUST00000117033 93 ntBASIC1.84□□□□□ -2.11
Col6a3E9PWQ3 Spanxn4-201ENSMUST00000172433 424 ntBASIC1.84□□□□□ -2.11
Col6a3E9PWQ3 4930420N18Rik-201ENSMUST00000191831 676 ntBASIC1.84□□□□□ -2.11
Col6a3E9PWQ3 Olfr1088-ps1-201ENSMUST00000213686 863 ntBASIC1.84□□□□□ -2.11
Col6a3E9PWQ3 AC151843.1-201ENSMUST00000215960 691 ntBASIC1.84□□□□□ -2.11
Col6a3E9PWQ3 Gm43320-201ENSMUST00000196047 2916 ntBASIC1.84□□□□□ -2.11
Col6a3E9PWQ3 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
Col6a3E9PWQ3 S100a5-202ENSMUST00000107329 431 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
Col6a3E9PWQ3 Gm15785-201ENSMUST00000119145 694 ntBASIC1.84□□□□□ -2.12
Col6a3E9PWQ3 Gm23336-201ENSMUST00000117023 123 ntBASIC1.83□□□□□ -2.12
Col6a3E9PWQ3 Tpo-203ENSMUST00000155263 664 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
Col6a3E9PWQ3 Mir7079-201ENSMUST00000184697 69 ntBASIC1.83□□□□□ -2.12
Col6a3E9PWQ3 1700067G17Rik-201ENSMUST00000186180 603 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
Col6a3E9PWQ3 Gm17850-201ENSMUST00000210023 1154 ntBASIC1.83□□□□□ -2.12
Col6a3E9PWQ3 Olfr589-202ENSMUST00000218483 966 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Col6a3E9PWQ3 Gm18188-201ENSMUST00000219386 478 ntBASIC1.83□□□□□ -2.12
Col6a3E9PWQ3 Olfr589-201ENSMUST00000061055 954 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
Col6a3E9PWQ3 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Col6a3E9PWQ3 1110015O18Rik-202ENSMUST00000183944 1533 ntTSL 3 BASIC1.83□□□□□ -2.12
Col6a3E9PWQ3 Gm7421-201ENSMUST00000119298 639 ntBASIC1.83□□□□□ -2.12
Col6a3E9PWQ3 Gm7365-201ENSMUST00000120877 639 ntBASIC1.83□□□□□ -2.12
Col6a3E9PWQ3 Mir8103-201ENSMUST00000183945 107 ntBASIC1.83□□□□□ -2.12
Col6a3E9PWQ3 Gm38167-201ENSMUST00000195704 1178 ntBASIC1.83□□□□□ -2.12
Col6a3E9PWQ3 AC158142.2-201ENSMUST00000227892 635 ntBASIC1.83□□□□□ -2.12
Col6a3E9PWQ3 Olfr1318-205ENSMUST00000217533 3747 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Col6a3E9PWQ3 Cep290-206ENSMUST00000219765 7985 ntTSL 5 BASIC1.83□□□□□ -2.12
Col6a3E9PWQ3 Gm45577-201ENSMUST00000210206 2287 ntBASIC1.83□□□□□ -2.12
Col6a3E9PWQ3 Gm13510-201ENSMUST00000118659 429 ntBASIC1.83□□□□□ -2.12
Col6a3E9PWQ3 Gm27330-201ENSMUST00000184689 132 ntBASIC1.83□□□□□ -2.12
Col6a3E9PWQ3 Gm44881-201ENSMUST00000205425 367 ntBASIC1.83□□□□□ -2.12
Col6a3E9PWQ3 Stap1-201ENSMUST00000031171 909 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
Col6a3E9PWQ3 Vmn2r90-201ENSMUST00000169805 2592 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Col6a3E9PWQ3 4933413L06Rik-202ENSMUST00000111588 922 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
Col6a3E9PWQ3 Gm12042-201ENSMUST00000120479 301 ntBASIC1.82□□□□□ -2.12
Col6a3E9PWQ3 Gm29534-201ENSMUST00000187328 382 ntBASIC1.82□□□□□ -2.12
Col6a3E9PWQ3 Ighv12-2-201ENSMUST00000191949 362 ntBASIC1.82□□□□□ -2.12
Col6a3E9PWQ3 Pak3-203ENSMUST00000112864 8612 ntAPPRIS P3 TSL 1 (best) BASIC1.82□□□□□ -2.12
Col6a3E9PWQ3 Gm17193-201ENSMUST00000116345 691 ntTSL 5 BASIC1.82□□□□□ -2.12
Col6a3E9PWQ3 Ear-ps3-201ENSMUST00000168308 445 ntBASIC1.82□□□□□ -2.12
Col6a3E9PWQ3 Gm45639-201ENSMUST00000211205 710 ntTSL 5 BASIC1.82□□□□□ -2.12
Col6a3E9PWQ3 AC113204.1-202ENSMUST00000219846 578 ntTSL 3 BASIC1.82□□□□□ -2.12
Col6a3E9PWQ3 AC154426.1-201ENSMUST00000225614 1132 ntBASIC1.82□□□□□ -2.12
Col6a3E9PWQ3 Gm10337-201ENSMUST00000096145 165 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
Col6a3E9PWQ3 5730408A14Rik-201ENSMUST00000194955 1824 ntBASIC1.82□□□□□ -2.12
Col6a3E9PWQ3 Slco6c1-202ENSMUST00000189547 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
Col6a3E9PWQ3 Olfr1186-203ENSMUST00000216978 1745 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Col6a3E9PWQ3 Gm13273-201ENSMUST00000119737 159 ntBASIC1.81□□□□□ -2.12
Col6a3E9PWQ3 Gm13487-201ENSMUST00000122240 864 ntBASIC1.81□□□□□ -2.12
Col6a3E9PWQ3 Gm27163-201ENSMUST00000184767 409 ntBASIC1.81□□□□□ -2.12
Col6a3E9PWQ3 Mir142-201ENSMUST00000198092 64 ntBASIC1.81□□□□□ -2.12
Col6a3E9PWQ3 CT025525.2-201ENSMUST00000227743 423 ntBASIC1.81□□□□□ -2.12
Col6a3E9PWQ3 Gm38212-201ENSMUST00000194081 2756 ntBASIC1.81□□□□□ -2.12
Col6a3E9PWQ3 Oog2-201ENSMUST00000080405 1917 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
Col6a3E9PWQ3 Gm6185-201ENSMUST00000193379 3553 ntBASIC1.81□□□□□ -2.12
Col6a3E9PWQ3 Naaladl2-202ENSMUST00000203414 9330 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
Col6a3E9PWQ3 Gm25553-201ENSMUST00000158076 79 ntBASIC1.81□□□□□ -2.12
Col6a3E9PWQ3 Gm22852-201ENSMUST00000177899 101 ntBASIC1.81□□□□□ -2.12
Col6a3E9PWQ3 CT030187.1-201ENSMUST00000220605 252 ntBASIC1.81□□□□□ -2.12
Col6a3E9PWQ3 AC174797.4-201ENSMUST00000225510 347 ntBASIC1.81□□□□□ -2.12
Col6a3E9PWQ3 1700036O09Rik-201ENSMUST00000136834 349 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
Col6a3E9PWQ3 Gm42533-201ENSMUST00000196247 157 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 94 ms