Protein–RNA interactions for Protein: A3KGF9

Ccdc9b, Coiled-coil domain-containing protein 9B, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9bA3KGF9 Slc6a15-201ENSMUST00000074204 3607 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Ccdc9bA3KGF9 Olfr920-201ENSMUST00000074740 5711 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Ccdc9bA3KGF9 Tug1-202ENSMUST00000144852 4720 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Ccdc9bA3KGF9 Vmn1r204-202ENSMUST00000228195 2936 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Ccdc9bA3KGF9 Ago2-201ENSMUST00000044113 13705 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Ccdc9bA3KGF9 Arhgap5-202ENSMUST00000217820 2332 ntTSL 5 BASIC4.55□□□□□ -1.68
Ccdc9bA3KGF9 Vmn2r75-201ENSMUST00000167830 2562 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Ccdc9bA3KGF9 Vmn2r-ps69-201ENSMUST00000173382 2565 ntBASIC4.55□□□□□ -1.68
Ccdc9bA3KGF9 Olfr133-203ENSMUST00000215078 3130 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Ccdc9bA3KGF9 Pbrm1-201ENSMUST00000022471 5871 ntTSL 5 BASIC4.54□□□□□ -1.68
Ccdc9bA3KGF9 Olfr427-202ENSMUST00000213832 3866 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Ccdc9bA3KGF9 Gm43696-201ENSMUST00000199385 6071 ntBASIC4.54□□□□□ -1.68
Ccdc9bA3KGF9 Olfr1303-202ENSMUST00000216114 2976 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Ccdc9bA3KGF9 Ccr9-204ENSMUST00000168910 2888 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Ccdc9bA3KGF9 Gm37726-201ENSMUST00000193246 3886 ntBASIC4.54□□□□□ -1.68
Ccdc9bA3KGF9 Gm43197-201ENSMUST00000201493 2583 ntBASIC4.54□□□□□ -1.68
Ccdc9bA3KGF9 Vmn1r34-205ENSMUST00000227332 3075 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Ccdc9bA3KGF9 Mir676-201ENSMUST00000102443 89 ntBASIC4.54□□□□□ -1.68
Ccdc9bA3KGF9 Gm25096-201ENSMUST00000104043 129 ntBASIC4.54□□□□□ -1.68
Ccdc9bA3KGF9 Gm15297-201ENSMUST00000117795 290 ntBASIC4.54□□□□□ -1.68
Ccdc9bA3KGF9 n-R5s21-201ENSMUST00000122692 117 ntBASIC4.54□□□□□ -1.68
Ccdc9bA3KGF9 Gm17023-201ENSMUST00000165885 448 ntTSL 2 BASIC4.54□□□□□ -1.68
Ccdc9bA3KGF9 Gm5168-202ENSMUST00000168002 636 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Ccdc9bA3KGF9 I0C0044D17Rik-202ENSMUST00000168045 510 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Ccdc9bA3KGF9 Vmn1r-ps40-201ENSMUST00000172862 343 ntBASIC4.54□□□□□ -1.68
Ccdc9bA3KGF9 Gm27834-201ENSMUST00000183427 125 ntBASIC4.54□□□□□ -1.68
Ccdc9bA3KGF9 Gm27202-201ENSMUST00000183838 512 ntTSL 5 BASIC4.54□□□□□ -1.68
Ccdc9bA3KGF9 Cox6b2-209ENSMUST00000184143 435 ntTSL 2 BASIC4.54□□□□□ -1.68
Ccdc9bA3KGF9 AV026068-203ENSMUST00000185946 668 ntTSL 3 BASIC4.54□□□□□ -1.68
Ccdc9bA3KGF9 Gm23925-202ENSMUST00000188429 132 ntBASIC4.54□□□□□ -1.68
Ccdc9bA3KGF9 Gm29218-205ENSMUST00000190846 615 ntBASIC4.54□□□□□ -1.68
Ccdc9bA3KGF9 Igkv3-12-1-201ENSMUST00000197093 351 ntBASIC4.54□□□□□ -1.68
Ccdc9bA3KGF9 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC4.54□□□□□ -1.68
Ccdc9bA3KGF9 AC133598.4-202ENSMUST00000225267 469 ntBASIC4.54□□□□□ -1.68
Ccdc9bA3KGF9 Olfr665-203ENSMUST00000216257 2298 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Ccdc9bA3KGF9 Gm37514-201ENSMUST00000194512 2753 ntBASIC4.54□□□□□ -1.68
Ccdc9bA3KGF9 Smgc-201ENSMUST00000088555 2977 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
Ccdc9bA3KGF9 Cnot1-201ENSMUST00000068452 8152 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Ccdc9bA3KGF9 Gm5444-201ENSMUST00000065956 2468 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Ccdc9bA3KGF9 Vmn2r42-204ENSMUST00000142934 3694 ntTSL 5 BASIC4.54□□□□□ -1.68
Ccdc9bA3KGF9 Zfp950-204ENSMUST00000143264 4825 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Ccdc9bA3KGF9 Vmn2r24-201ENSMUST00000075095 2565 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Ccdc9bA3KGF9 Gm14308-201ENSMUST00000108990 1628 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
Ccdc9bA3KGF9 Fat1-206ENSMUST00000215588 13938 ntTSL 5 BASIC4.53□□□□□ -1.68
Ccdc9bA3KGF9 Gm8989-201ENSMUST00000184782 7275 ntBASIC4.53□□□□□ -1.68
Ccdc9bA3KGF9 Vmn1r171-203ENSMUST00000226321 3067 ntAPPRIS ALT2 BASIC4.53□□□□□ -1.68
Ccdc9bA3KGF9 Gm19428-201ENSMUST00000220512 1995 ntBASIC4.53□□□□□ -1.68
Ccdc9bA3KGF9 Gm42548-201ENSMUST00000202669 3933 ntBASIC4.53□□□□□ -1.68
Ccdc9bA3KGF9 Trav6-7-dv9-201ENSMUST00000103638 379 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Ccdc9bA3KGF9 Gm14537-201ENSMUST00000117464 599 ntBASIC4.53□□□□□ -1.68
Ccdc9bA3KGF9 Gm14628-201ENSMUST00000117508 635 ntBASIC4.53□□□□□ -1.68
Ccdc9bA3KGF9 Gm11584-201ENSMUST00000120636 325 ntBASIC4.53□□□□□ -1.68
Ccdc9bA3KGF9 Gm14581-201ENSMUST00000121726 198 ntBASIC4.53□□□□□ -1.68
Ccdc9bA3KGF9 Gm15986-201ENSMUST00000122153 400 ntBASIC4.53□□□□□ -1.68
Ccdc9bA3KGF9 Gm16220-201ENSMUST00000131874 405 ntTSL 3 BASIC4.53□□□□□ -1.68
Ccdc9bA3KGF9 A630050E04Rik-201ENSMUST00000151443 581 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Ccdc9bA3KGF9 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC4.53□□□□□ -1.68
Ccdc9bA3KGF9 Gm27760-201ENSMUST00000185048 114 ntBASIC4.53□□□□□ -1.68
Ccdc9bA3KGF9 Gm28148-201ENSMUST00000186924 697 ntBASIC4.53□□□□□ -1.68
Ccdc9bA3KGF9 Hcfc1r1-ps2-201ENSMUST00000199379 339 ntBASIC4.53□□□□□ -1.68
Ccdc9bA3KGF9 Gm44543-201ENSMUST00000209136 396 ntBASIC4.53□□□□□ -1.68
Ccdc9bA3KGF9 Jakmip1-216ENSMUST00000212997 138 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Ccdc9bA3KGF9 Olfr1065-202ENSMUST00000216162 2148 ntAPPRIS P1 TSL 3 BASIC4.53□□□□□ -1.68
Ccdc9bA3KGF9 AC153553.1-201ENSMUST00000218257 684 ntBASIC4.53□□□□□ -1.68
Ccdc9bA3KGF9 Gm5750-201ENSMUST00000218711 801 ntBASIC4.53□□□□□ -1.68
Ccdc9bA3KGF9 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Ccdc9bA3KGF9 LOC667541-201ENSMUST00000223408 278 ntBASIC4.53□□□□□ -1.68
Ccdc9bA3KGF9 AC121599.1-201ENSMUST00000224276 449 ntBASIC4.53□□□□□ -1.68
Ccdc9bA3KGF9 CT025525.4-201ENSMUST00000227728 277 ntBASIC4.53□□□□□ -1.68
Ccdc9bA3KGF9 Gm10916-201ENSMUST00000080330 483 ntBASIC4.53□□□□□ -1.68
Ccdc9bA3KGF9 4930512M02Rik-201ENSMUST00000081896 715 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Ccdc9bA3KGF9 Mir99a-201ENSMUST00000083596 65 ntBASIC4.53□□□□□ -1.68
Ccdc9bA3KGF9 Gm23041-201ENSMUST00000083868 106 ntBASIC4.53□□□□□ -1.68
Ccdc9bA3KGF9 Kncn-201ENSMUST00000097918 951 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Ccdc9bA3KGF9 Ktn1-219ENSMUST00000190182 3984 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
Ccdc9bA3KGF9 Gm43888-201ENSMUST00000204405 2587 ntBASIC4.53□□□□□ -1.68
Ccdc9bA3KGF9 Nexn-212ENSMUST00000199470 2392 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
Ccdc9bA3KGF9 C230031I18Rik-201ENSMUST00000197856 3698 ntBASIC4.52□□□□□ -1.69
Ccdc9bA3KGF9 Gm20667-201ENSMUST00000175674 1930 ntBASIC4.52□□□□□ -1.69
Ccdc9bA3KGF9 Pgap1-201ENSMUST00000097739 10583 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Ccdc9bA3KGF9 Ogt-201ENSMUST00000044475 5384 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
Ccdc9bA3KGF9 Vmn1r214-202ENSMUST00000227236 3892 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Ccdc9bA3KGF9 n-R5s67-201ENSMUST00000104336 114 ntBASIC4.52□□□□□ -1.69
Ccdc9bA3KGF9 Gm22899-201ENSMUST00000104540 131 ntBASIC4.52□□□□□ -1.69
Ccdc9bA3KGF9 Gm13457-201ENSMUST00000117885 267 ntBASIC4.52□□□□□ -1.69
Ccdc9bA3KGF9 Rpl23a-ps6-201ENSMUST00000119466 468 ntBASIC4.52□□□□□ -1.69
Ccdc9bA3KGF9 Gm25176-201ENSMUST00000122640 125 ntBASIC4.52□□□□□ -1.69
Ccdc9bA3KGF9 Gm16365-204ENSMUST00000143877 779 ntTSL 2 BASIC4.52□□□□□ -1.69
Ccdc9bA3KGF9 Gm20698-201ENSMUST00000175657 233 ntBASIC4.52□□□□□ -1.69
Ccdc9bA3KGF9 2310001H17Rik-201ENSMUST00000180379 521 ntTSL 2 BASIC4.52□□□□□ -1.69
Ccdc9bA3KGF9 Mir7074-201ENSMUST00000183884 63 ntBASIC4.52□□□□□ -1.69
Ccdc9bA3KGF9 Gm20257-202ENSMUST00000188643 130 ntBASIC4.52□□□□□ -1.69
Ccdc9bA3KGF9 Gm5285-201ENSMUST00000193089 666 ntBASIC4.52□□□□□ -1.69
Ccdc9bA3KGF9 Gm38011-201ENSMUST00000193312 279 ntBASIC4.52□□□□□ -1.69
Ccdc9bA3KGF9 Gm9402-201ENSMUST00000196849 388 ntBASIC4.52□□□□□ -1.69
Ccdc9bA3KGF9 4930520M14Rik-201ENSMUST00000196947 701 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Ccdc9bA3KGF9 Gm36259-201ENSMUST00000197340 392 ntBASIC4.52□□□□□ -1.69
Ccdc9bA3KGF9 Gm44473-201ENSMUST00000204039 152 ntBASIC4.52□□□□□ -1.69
Ccdc9bA3KGF9 Gm44513-201ENSMUST00000206811 439 ntBASIC4.52□□□□□ -1.69
Ccdc9bA3KGF9 AC109180.1-201ENSMUST00000218676 398 ntBASIC4.52□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 78.5 ms