Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 n-R5s164-201ENSMUST00000122664 112 ntBASIC2.54□□□□□ -2
Scn3aA2ASI5 Mup-ps4-201ENSMUST00000151005 539 ntBASIC2.54□□□□□ -2
Scn3aA2ASI5 Gm16584-201ENSMUST00000159267 189 ntBASIC2.54□□□□□ -2
Scn3aA2ASI5 Taf1d-202ENSMUST00000164079 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
Scn3aA2ASI5 Gm20513-201ENSMUST00000174074 537 ntTSL 1 (best) BASIC2.54□□□□□ -2
Scn3aA2ASI5 2810025M15Rik-203ENSMUST00000189791 251 ntBASIC2.54□□□□□ -2
Scn3aA2ASI5 Gm37817-201ENSMUST00000195276 434 ntBASIC2.54□□□□□ -2
Scn3aA2ASI5 Gm19252-201ENSMUST00000204705 305 ntBASIC2.54□□□□□ -2
Scn3aA2ASI5 Vmn1r85-202ENSMUST00000209822 1251 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
Scn3aA2ASI5 Gm18015-201ENSMUST00000214879 316 ntBASIC2.54□□□□□ -2
Scn3aA2ASI5 AC151843.1-201ENSMUST00000215960 691 ntBASIC2.54□□□□□ -2
Scn3aA2ASI5 Eif1-ps2-201ENSMUST00000221990 339 ntBASIC2.54□□□□□ -2
Scn3aA2ASI5 AC131068.1-201ENSMUST00000226891 482 ntBASIC2.54□□□□□ -2
Scn3aA2ASI5 Tas2r106-201ENSMUST00000076756 927 ntAPPRIS P1 BASIC2.54□□□□□ -2
Scn3aA2ASI5 Vmn1r6-201ENSMUST00000079669 1058 ntAPPRIS P2 BASIC2.54□□□□□ -2
Scn3aA2ASI5 Olfr1052-202ENSMUST00000215090 1526 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Scn3aA2ASI5 Gm37788-201ENSMUST00000193958 2705 ntBASIC2.54□□□□□ -2
Scn3aA2ASI5 Vmn1r172-202ENSMUST00000173101 9109 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Scn3aA2ASI5 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Scn3aA2ASI5 Gm2348-201ENSMUST00000108782 300 ntBASIC2.54□□□□□ -2
Scn3aA2ASI5 Gm2288-201ENSMUST00000118560 638 ntBASIC2.54□□□□□ -2
Scn3aA2ASI5 1700046C09Rik-201ENSMUST00000139973 543 ntTSL 1 (best) BASIC2.54□□□□□ -2
Scn3aA2ASI5 Gm13782-201ENSMUST00000149515 352 ntTSL 3 BASIC2.54□□□□□ -2
Scn3aA2ASI5 Vmn1r-ps74-201ENSMUST00000173518 570 ntBASIC2.54□□□□□ -2
Scn3aA2ASI5 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC2.54□□□□□ -2
Scn3aA2ASI5 2310010J17Rik-201ENSMUST00000181189 490 ntTSL 1 (best) BASIC2.54□□□□□ -2
Scn3aA2ASI5 1700052H01Rik-202ENSMUST00000196973 429 ntTSL 1 (best) BASIC2.54□□□□□ -2
Scn3aA2ASI5 Gm43626-201ENSMUST00000198575 162 ntBASIC2.54□□□□□ -2
Scn3aA2ASI5 Gm42750-201ENSMUST00000199745 353 ntTSL 2 BASIC2.54□□□□□ -2
Scn3aA2ASI5 Gm42474-201ENSMUST00000201073 505 ntBASIC2.54□□□□□ -2
Scn3aA2ASI5 Olfr210-ps1-201ENSMUST00000203138 905 ntBASIC2.54□□□□□ -2
Scn3aA2ASI5 Olfr1460-ps1-201ENSMUST00000208975 899 ntBASIC2.54□□□□□ -2
Scn3aA2ASI5 Olfr1005-ps1-201ENSMUST00000216207 488 ntBASIC2.54□□□□□ -2
Scn3aA2ASI5 Gm22829-201ENSMUST00000083771 106 ntBASIC2.54□□□□□ -2
Scn3aA2ASI5 Skint9-201ENSMUST00000058605 1372 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Scn3aA2ASI5 Cd209e-201ENSMUST00000033888 1802 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Scn3aA2ASI5 Gm37387-201ENSMUST00000192201 1806 ntBASIC2.53□□□□□ -2
Scn3aA2ASI5 Gm43326-201ENSMUST00000198459 1638 ntBASIC2.53□□□□□ -2
Scn3aA2ASI5 1700036O09Rik-201ENSMUST00000136834 349 ntTSL 1 (best) BASIC2.53□□□□□ -2
Scn3aA2ASI5 Gm24771-201ENSMUST00000158508 137 ntBASIC2.53□□□□□ -2
Scn3aA2ASI5 Gm27443-201ENSMUST00000184660 98 ntBASIC2.53□□□□□ -2
Scn3aA2ASI5 Gm28127-201ENSMUST00000185293 622 ntTSL 1 (best) BASIC2.53□□□□□ -2
Scn3aA2ASI5 Gm28176-201ENSMUST00000185322 622 ntTSL 1 (best) BASIC2.53□□□□□ -2
Scn3aA2ASI5 Gm29210-201ENSMUST00000186332 622 ntTSL 1 (best) BASIC2.53□□□□□ -2
Scn3aA2ASI5 Gm28170-201ENSMUST00000186892 622 ntTSL 1 (best) BASIC2.53□□□□□ -2
Scn3aA2ASI5 Gm28725-201ENSMUST00000187372 622 ntTSL 1 (best) BASIC2.53□□□□□ -2
Scn3aA2ASI5 Gm29655-201ENSMUST00000187728 622 ntTSL 1 (best) BASIC2.53□□□□□ -2
Scn3aA2ASI5 Gm28280-201ENSMUST00000188196 622 ntTSL 1 (best) BASIC2.53□□□□□ -2
Scn3aA2ASI5 Gm28091-201ENSMUST00000188421 622 ntTSL 1 (best) BASIC2.53□□□□□ -2
Scn3aA2ASI5 Gm28850-201ENSMUST00000189058 622 ntTSL 1 (best) BASIC2.53□□□□□ -2
Scn3aA2ASI5 Gm28300-202ENSMUST00000189170 622 ntTSL 1 (best) BASIC2.53□□□□□ -2
Scn3aA2ASI5 Gm28690-202ENSMUST00000190325 622 ntTSL 1 (best) BASIC2.53□□□□□ -2
Scn3aA2ASI5 Gm28456-202ENSMUST00000190521 622 ntTSL 1 (best) BASIC2.53□□□□□ -2
Scn3aA2ASI5 Gm28325-202ENSMUST00000191481 622 ntTSL 1 (best) BASIC2.53□□□□□ -2
Scn3aA2ASI5 Gm43083-201ENSMUST00000199594 476 ntBASIC2.53□□□□□ -2
Scn3aA2ASI5 Gm44076-201ENSMUST00000203072 520 ntBASIC2.53□□□□□ -2
Scn3aA2ASI5 Gm44718-201ENSMUST00000206886 359 ntBASIC2.53□□□□□ -2
Scn3aA2ASI5 Olfr791-201ENSMUST00000057477 939 ntAPPRIS P1 BASIC2.53□□□□□ -2
Scn3aA2ASI5 Olfr727-201ENSMUST00000079142 1035 ntAPPRIS P1 BASIC2.53□□□□□ -2
Scn3aA2ASI5 Gm26203-201ENSMUST00000082911 114 ntBASIC2.53□□□□□ -2
Scn3aA2ASI5 Prl6a1-202ENSMUST00000091680 868 ntAPPRIS P2 TSL 1 (best) BASIC2.53□□□□□ -2
Scn3aA2ASI5 Gm43047-201ENSMUST00000200089 3460 ntBASIC2.53□□□□□ -2
Scn3aA2ASI5 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2.01
Scn3aA2ASI5 Olfr1370-204ENSMUST00000215806 4322 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Scn3aA2ASI5 Olfr894-202ENSMUST00000212992 3234 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
Scn3aA2ASI5 Gm25094-201ENSMUST00000103992 131 ntBASIC2.52□□□□□ -2.01
Scn3aA2ASI5 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC2.52□□□□□ -2.01
Scn3aA2ASI5 Gm12941-201ENSMUST00000117934 220 ntBASIC2.52□□□□□ -2.01
Scn3aA2ASI5 Gm22073-201ENSMUST00000122668 189 ntBASIC2.52□□□□□ -2.01
Scn3aA2ASI5 Gm23505-201ENSMUST00000158989 130 ntBASIC2.52□□□□□ -2.01
Scn3aA2ASI5 9130204L05Rik-201ENSMUST00000166173 489 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Scn3aA2ASI5 Gm22264-201ENSMUST00000178200 107 ntBASIC2.52□□□□□ -2.01
Scn3aA2ASI5 Gm27608-201ENSMUST00000184822 162 ntBASIC2.52□□□□□ -2.01
Scn3aA2ASI5 Gm18268-201ENSMUST00000208445 943 ntBASIC2.52□□□□□ -2.01
Scn3aA2ASI5 Olfr499-ps1-201ENSMUST00000208811 930 ntBASIC2.52□□□□□ -2.01
Scn3aA2ASI5 Olfr1073-ps1-202ENSMUST00000215705 478 ntBASIC2.52□□□□□ -2.01
Scn3aA2ASI5 Gm19233-201ENSMUST00000219772 936 ntBASIC2.52□□□□□ -2.01
Scn3aA2ASI5 Mir322-201ENSMUST00000083484 95 ntBASIC2.52□□□□□ -2.01
Scn3aA2ASI5 Gm7135-202ENSMUST00000191257 1905 ntBASIC2.52□□□□□ -2.01
Scn3aA2ASI5 Olfr810-204ENSMUST00000217283 4527 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Scn3aA2ASI5 Krcc1-201ENSMUST00000080949 1393 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Scn3aA2ASI5 n-R5s200-201ENSMUST00000104194 113 ntBASIC2.52□□□□□ -2.01
Scn3aA2ASI5 Gm13728-201ENSMUST00000117471 400 ntBASIC2.52□□□□□ -2.01
Scn3aA2ASI5 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC2.52□□□□□ -2.01
Scn3aA2ASI5 Gm17072-201ENSMUST00000166673 658 ntBASIC2.52□□□□□ -2.01
Scn3aA2ASI5 Vmn1r88-201ENSMUST00000171783 951 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Scn3aA2ASI5 Gm22392-201ENSMUST00000177971 107 ntBASIC2.52□□□□□ -2.01
Scn3aA2ASI5 Gm27233-201ENSMUST00000184030 307 ntBASIC2.52□□□□□ -2.01
Scn3aA2ASI5 Mir7226-201ENSMUST00000184953 60 ntBASIC2.52□□□□□ -2.01
Scn3aA2ASI5 Gm10925-201ENSMUST00000189941 678 ntBASIC2.52□□□□□ -2.01
Scn3aA2ASI5 Gm37616-201ENSMUST00000193974 322 ntBASIC2.52□□□□□ -2.01
Scn3aA2ASI5 Olfr1142-ps1-201ENSMUST00000213624 805 ntBASIC2.52□□□□□ -2.01
Scn3aA2ASI5 4930567K20Rik-203ENSMUST00000220108 646 ntTSL 5 BASIC2.52□□□□□ -2.01
Scn3aA2ASI5 Stfa2-201ENSMUST00000023619 423 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Scn3aA2ASI5 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Scn3aA2ASI5 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC2.51□□□□□ -2.01
Scn3aA2ASI5 Gm42852-201ENSMUST00000202649 1379 ntBASIC2.51□□□□□ -2.01
Scn3aA2ASI5 Sult2a8-201ENSMUST00000063509 2143 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Scn3aA2ASI5 Gm44562-201ENSMUST00000207194 1347 ntBASIC2.51□□□□□ -2.01
Scn3aA2ASI5 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 123.2 ms