Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Gm14404-201ENSMUST00000119117 1660 ntBASIC2.69□□□□□ -1.98
Cldn9Q9Z0S7 Gm2026-201ENSMUST00000109007 1621 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
Cldn9Q9Z0S7 D030040B21Rik-201ENSMUST00000181371 2788 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
Cldn9Q9Z0S7 Gm44049-201ENSMUST00000204905 2984 ntBASIC2.68□□□□□ -1.98
Cldn9Q9Z0S7 Gm9009-201ENSMUST00000117321 326 ntBASIC2.68□□□□□ -1.98
Cldn9Q9Z0S7 Gm12891-201ENSMUST00000119358 240 ntBASIC2.68□□□□□ -1.98
Cldn9Q9Z0S7 Gm16021-201ENSMUST00000121176 219 ntBASIC2.68□□□□□ -1.98
Cldn9Q9Z0S7 Gm25107-201ENSMUST00000122472 129 ntBASIC2.68□□□□□ -1.98
Cldn9Q9Z0S7 Gm26027-201ENSMUST00000122725 268 ntBASIC2.68□□□□□ -1.98
Cldn9Q9Z0S7 Gm25807-201ENSMUST00000122783 305 ntBASIC2.68□□□□□ -1.98
Cldn9Q9Z0S7 Gm4916-201ENSMUST00000126139 642 ntBASIC2.68□□□□□ -1.98
Cldn9Q9Z0S7 4930527E20Rik-201ENSMUST00000135700 351 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
Cldn9Q9Z0S7 Gm23754-201ENSMUST00000157576 63 ntBASIC2.68□□□□□ -1.98
Cldn9Q9Z0S7 Gm23380-201ENSMUST00000158448 103 ntBASIC2.68□□□□□ -1.98
Cldn9Q9Z0S7 Gm25490-201ENSMUST00000158734 130 ntBASIC2.68□□□□□ -1.98
Cldn9Q9Z0S7 Gm24736-201ENSMUST00000158862 130 ntBASIC2.68□□□□□ -1.98
Cldn9Q9Z0S7 Gm23473-201ENSMUST00000158883 116 ntBASIC2.68□□□□□ -1.98
Cldn9Q9Z0S7 Klrc1-204ENSMUST00000169545 676 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
Cldn9Q9Z0S7 Gm20450-201ENSMUST00000173652 147 ntBASIC2.68□□□□□ -1.98
Cldn9Q9Z0S7 Snord53-201ENSMUST00000175146 78 ntBASIC2.68□□□□□ -1.98
Cldn9Q9Z0S7 Gm27921-201ENSMUST00000183968 108 ntBASIC2.68□□□□□ -1.98
Cldn9Q9Z0S7 Gm29414-201ENSMUST00000185379 448 ntTSL 3 BASIC2.68□□□□□ -1.98
Cldn9Q9Z0S7 Gm5268-201ENSMUST00000189212 940 ntBASIC2.68□□□□□ -1.98
Cldn9Q9Z0S7 Gm19498-201ENSMUST00000191128 331 ntBASIC2.68□□□□□ -1.98
Cldn9Q9Z0S7 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC2.68□□□□□ -1.98
Cldn9Q9Z0S7 Gm42828-201ENSMUST00000199669 469 ntBASIC2.68□□□□□ -1.98
Cldn9Q9Z0S7 Gm45023-201ENSMUST00000207951 379 ntBASIC2.68□□□□□ -1.98
Cldn9Q9Z0S7 Gm18557-201ENSMUST00000218710 433 ntBASIC2.68□□□□□ -1.98
Cldn9Q9Z0S7 AC168274.2-201ENSMUST00000219252 338 ntTSL 5 BASIC2.68□□□□□ -1.98
Cldn9Q9Z0S7 AC153522.1-201ENSMUST00000220047 1090 ntBASIC2.68□□□□□ -1.98
Cldn9Q9Z0S7 AC192334.1-201ENSMUST00000221832 1268 ntTSL 5 BASIC2.68□□□□□ -1.98
Cldn9Q9Z0S7 CT030184.1-201ENSMUST00000222393 416 ntBASIC2.68□□□□□ -1.98
Cldn9Q9Z0S7 4930469K13Rik-202ENSMUST00000223852 537 ntAPPRIS P5 BASIC2.68□□□□□ -1.98
Cldn9Q9Z0S7 AC160984.2-201ENSMUST00000224927 791 ntBASIC2.68□□□□□ -1.98
Cldn9Q9Z0S7 AC129541.1-201ENSMUST00000226940 523 ntBASIC2.68□□□□□ -1.98
Cldn9Q9Z0S7 Gngt1-201ENSMUST00000031673 1183 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
Cldn9Q9Z0S7 Gm22507-201ENSMUST00000082773 160 ntBASIC2.68□□□□□ -1.98
Cldn9Q9Z0S7 Olfr1453-201ENSMUST00000087773 924 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
Cldn9Q9Z0S7 Hsf3-205ENSMUST00000179832 1972 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
Cldn9Q9Z0S7 Olfr594-202ENSMUST00000214051 2809 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
Cldn9Q9Z0S7 Olfr747-204ENSMUST00000213238 1416 ntAPPRIS P1 TSL 3 BASIC2.68□□□□□ -1.98
Cldn9Q9Z0S7 Olfr389-201ENSMUST00000122224 3057 ntAPPRIS P1 TSL 2 BASIC2.67□□□□□ -1.98
Cldn9Q9Z0S7 Gm7648-201ENSMUST00000173036 1658 ntBASIC2.67□□□□□ -1.98
Cldn9Q9Z0S7 Olfr844-202ENSMUST00000220268 1686 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
Cldn9Q9Z0S7 Olfr1162-202ENSMUST00000183862 4800 ntAPPRIS P1 TSL 2 BASIC2.67□□□□□ -1.98
Cldn9Q9Z0S7 Gm42479-201ENSMUST00000198654 1356 ntBASIC2.67□□□□□ -1.98
Cldn9Q9Z0S7 Gm15282-201ENSMUST00000117707 300 ntBASIC2.67□□□□□ -1.98
Cldn9Q9Z0S7 Gm14566-201ENSMUST00000118915 321 ntBASIC2.67□□□□□ -1.98
Cldn9Q9Z0S7 Vmn1r-ps106-201ENSMUST00000120587 824 ntBASIC2.67□□□□□ -1.98
Cldn9Q9Z0S7 Gm15061-201ENSMUST00000121076 1046 ntBASIC2.67□□□□□ -1.98
Cldn9Q9Z0S7 Gm12819-201ENSMUST00000122223 629 ntBASIC2.67□□□□□ -1.98
Cldn9Q9Z0S7 Gm24840-201ENSMUST00000122603 147 ntBASIC2.67□□□□□ -1.98
Cldn9Q9Z0S7 Gm15961-201ENSMUST00000156090 266 ntTSL 3 BASIC2.67□□□□□ -1.98
Cldn9Q9Z0S7 Gm23409-201ENSMUST00000158516 237 ntBASIC2.67□□□□□ -1.98
Cldn9Q9Z0S7 Gm17164-201ENSMUST00000169013 506 ntBASIC2.67□□□□□ -1.98
Cldn9Q9Z0S7 Obox4-ps35-201ENSMUST00000173825 680 ntTSL 3 BASIC2.67□□□□□ -1.98
Cldn9Q9Z0S7 Gm13147-202ENSMUST00000177526 1173 ntBASIC2.67□□□□□ -1.98
Cldn9Q9Z0S7 1700025F22Rik-202ENSMUST00000180678 658 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
Cldn9Q9Z0S7 2310010J17Rik-201ENSMUST00000181189 490 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
Cldn9Q9Z0S7 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
Cldn9Q9Z0S7 1810044D09Rik-201ENSMUST00000186472 486 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
Cldn9Q9Z0S7 Gm18667-201ENSMUST00000186523 484 ntBASIC2.67□□□□□ -1.98
Cldn9Q9Z0S7 Gm29330-201ENSMUST00000190032 699 ntBASIC2.67□□□□□ -1.98
Cldn9Q9Z0S7 Gm28098-201ENSMUST00000191361 699 ntBASIC2.67□□□□□ -1.98
Cldn9Q9Z0S7 Igkv14-134-1-201ENSMUST00000199111 331 ntBASIC2.67□□□□□ -1.98
Cldn9Q9Z0S7 Gm43531-201ENSMUST00000200676 1114 ntBASIC2.67□□□□□ -1.98
Cldn9Q9Z0S7 Gm44058-201ENSMUST00000204335 467 ntBASIC2.67□□□□□ -1.98
Cldn9Q9Z0S7 Gm36485-201ENSMUST00000214286 464 ntTSL 3 BASIC2.67□□□□□ -1.98
Cldn9Q9Z0S7 AC150314.1-201ENSMUST00000214798 238 ntBASIC2.67□□□□□ -1.98
Cldn9Q9Z0S7 AC154636.3-201ENSMUST00000221489 1214 ntBASIC2.67□□□□□ -1.98
Cldn9Q9Z0S7 AC131743.3-201ENSMUST00000222099 662 ntBASIC2.67□□□□□ -1.98
Cldn9Q9Z0S7 AC154576.2-202ENSMUST00000223916 688 ntBASIC2.67□□□□□ -1.98
Cldn9Q9Z0S7 AC124569.1-201ENSMUST00000225932 101 ntBASIC2.67□□□□□ -1.98
Cldn9Q9Z0S7 Olfr914-201ENSMUST00000057755 951 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
Cldn9Q9Z0S7 Tas2r118-201ENSMUST00000062463 900 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
Cldn9Q9Z0S7 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
Cldn9Q9Z0S7 Olfr1040-201ENSMUST00000099909 942 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
Cldn9Q9Z0S7 AC115047.2-201ENSMUST00000214421 1848 ntBASIC2.67□□□□□ -1.98
Cldn9Q9Z0S7 Olfr862-202ENSMUST00000079660 2604 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
Cldn9Q9Z0S7 Mgat4c-201ENSMUST00000020039 3735 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
Cldn9Q9Z0S7 Gm44230-201ENSMUST00000203032 3550 ntBASIC2.66□□□□□ -1.98
Cldn9Q9Z0S7 Gm43230-201ENSMUST00000200980 2129 ntBASIC2.66□□□□□ -1.98
Cldn9Q9Z0S7 Vmn2r-ps69-201ENSMUST00000173382 2565 ntBASIC2.66□□□□□ -1.98
Cldn9Q9Z0S7 Skint9-201ENSMUST00000058605 1372 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
Cldn9Q9Z0S7 C87977-201ENSMUST00000105753 2446 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
Cldn9Q9Z0S7 Slain1os-201ENSMUST00000160117 3101 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
Cldn9Q9Z0S7 Gm25728-201ENSMUST00000104525 159 ntBASIC2.66□□□□□ -1.98
Cldn9Q9Z0S7 Gm7974-201ENSMUST00000117154 408 ntBASIC2.66□□□□□ -1.98
Cldn9Q9Z0S7 Gm16171-201ENSMUST00000118004 324 ntBASIC2.66□□□□□ -1.98
Cldn9Q9Z0S7 Gm14525-201ENSMUST00000119649 893 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
Cldn9Q9Z0S7 Gm14877-201ENSMUST00000119803 478 ntBASIC2.66□□□□□ -1.98
Cldn9Q9Z0S7 Gm14238-201ENSMUST00000120227 323 ntBASIC2.66□□□□□ -1.98
Cldn9Q9Z0S7 Gm14129-201ENSMUST00000122436 291 ntBASIC2.66□□□□□ -1.98
Cldn9Q9Z0S7 Gm22957-201ENSMUST00000122511 123 ntBASIC2.66□□□□□ -1.98
Cldn9Q9Z0S7 Gm13901-201ENSMUST00000137252 468 ntBASIC2.66□□□□□ -1.98
Cldn9Q9Z0S7 Gm12023-201ENSMUST00000145182 520 ntTSL 5 BASIC2.66□□□□□ -1.98
Cldn9Q9Z0S7 Gm22225-201ENSMUST00000157358 278 ntBASIC2.66□□□□□ -1.98
Cldn9Q9Z0S7 Gm17061-201ENSMUST00000163167 499 ntBASIC2.66□□□□□ -1.98
Cldn9Q9Z0S7 Gm24754-201ENSMUST00000177997 107 ntBASIC2.66□□□□□ -1.98
Cldn9Q9Z0S7 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
Retrieved 100 of 76,532 protein–RNA pairs in 80.1 ms