Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Gm23116-201ENSMUST00000158481 67 ntBASIC2.12□□□□□ -2.07
Scn8aQ9WTU3 Gm22891-201ENSMUST00000158641 164 ntBASIC2.12□□□□□ -2.07
Scn8aQ9WTU3 Gm36467-202ENSMUST00000195606 622 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
Scn8aQ9WTU3 Gm43427-201ENSMUST00000198188 331 ntBASIC2.12□□□□□ -2.07
Scn8aQ9WTU3 Gm45772-201ENSMUST00000212961 240 ntBASIC2.12□□□□□ -2.07
Scn8aQ9WTU3 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
Scn8aQ9WTU3 Olfr729-201ENSMUST00000061020 972 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
Scn8aQ9WTU3 Gm19194-201ENSMUST00000192015 3774 ntBASIC2.12□□□□□ -2.07
Scn8aQ9WTU3 Olfr592-202ENSMUST00000106893 6566 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Scn8aQ9WTU3 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Scn8aQ9WTU3 Rpl31-ps22-201ENSMUST00000117961 337 ntBASIC2.12□□□□□ -2.07
Scn8aQ9WTU3 Gm17065-201ENSMUST00000165245 239 ntBASIC2.12□□□□□ -2.07
Scn8aQ9WTU3 Gm37021-201ENSMUST00000195835 663 ntTSL 5 BASIC2.12□□□□□ -2.07
Scn8aQ9WTU3 Gm43550-201ENSMUST00000200597 303 ntBASIC2.12□□□□□ -2.07
Scn8aQ9WTU3 Gm45382-201ENSMUST00000210607 151 ntBASIC2.12□□□□□ -2.07
Scn8aQ9WTU3 AC102575.1-201ENSMUST00000225348 547 ntBASIC2.12□□□□□ -2.07
Scn8aQ9WTU3 AC121598.3-201ENSMUST00000227179 1643 ntBASIC2.12□□□□□ -2.07
Scn8aQ9WTU3 Sult1b1-201ENSMUST00000031199 2604 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
Scn8aQ9WTU3 Vmn1r185-211ENSMUST00000228467 6915 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
Scn8aQ9WTU3 Olfr1158-201ENSMUST00000102622 942 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
Scn8aQ9WTU3 Gm7123-201ENSMUST00000117647 213 ntBASIC2.11□□□□□ -2.07
Scn8aQ9WTU3 Gm15936-201ENSMUST00000118706 460 ntBASIC2.11□□□□□ -2.07
Scn8aQ9WTU3 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC2.11□□□□□ -2.07
Scn8aQ9WTU3 Gm16328-201ENSMUST00000126985 196 ntBASIC2.11□□□□□ -2.07
Scn8aQ9WTU3 Gm25971-201ENSMUST00000158953 286 ntBASIC2.11□□□□□ -2.07
Scn8aQ9WTU3 Gm36974-201ENSMUST00000194200 1071 ntBASIC2.11□□□□□ -2.07
Scn8aQ9WTU3 Ighv1-1-201ENSMUST00000194912 291 ntBASIC2.11□□□□□ -2.07
Scn8aQ9WTU3 AC155715.1-201ENSMUST00000213575 463 ntBASIC2.11□□□□□ -2.07
Scn8aQ9WTU3 AC160061.1-201ENSMUST00000217766 533 ntTSL 3 BASIC2.11□□□□□ -2.07
Scn8aQ9WTU3 AC155634.2-201ENSMUST00000222001 489 ntTSL 3 BASIC2.11□□□□□ -2.07
Scn8aQ9WTU3 AC132881.2-201ENSMUST00000225474 709 ntBASIC2.11□□□□□ -2.07
Scn8aQ9WTU3 Tas2r103-201ENSMUST00000032317 939 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
Scn8aQ9WTU3 Olfr1313-202ENSMUST00000213577 2588 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
Scn8aQ9WTU3 Olfr1354-203ENSMUST00000217073 3792 ntAPPRIS P1 TSL 2 BASIC2.11□□□□□ -2.07
Scn8aQ9WTU3 Gm42659-201ENSMUST00000196955 1754 ntBASIC2.11□□□□□ -2.07
Scn8aQ9WTU3 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC2.1□□□□□ -2.07
Scn8aQ9WTU3 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Scn8aQ9WTU3 Celf2-203ENSMUST00000114923 529 ntTSL 3 BASIC2.1□□□□□ -2.07
Scn8aQ9WTU3 Gm12587-201ENSMUST00000120180 427 ntBASIC2.1□□□□□ -2.07
Scn8aQ9WTU3 Gm23885-201ENSMUST00000122682 294 ntBASIC2.1□□□□□ -2.07
Scn8aQ9WTU3 Gm26345-201ENSMUST00000157534 120 ntBASIC2.1□□□□□ -2.07
Scn8aQ9WTU3 Gm18406-201ENSMUST00000185872 669 ntBASIC2.1□□□□□ -2.07
Scn8aQ9WTU3 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC2.1□□□□□ -2.07
Scn8aQ9WTU3 Gm29330-201ENSMUST00000190032 699 ntBASIC2.1□□□□□ -2.07
Scn8aQ9WTU3 Gm28098-201ENSMUST00000191361 699 ntBASIC2.1□□□□□ -2.07
Scn8aQ9WTU3 Gm43115-201ENSMUST00000196244 160 ntBASIC2.1□□□□□ -2.07
Scn8aQ9WTU3 Gm45150-201ENSMUST00000206051 467 ntBASIC2.1□□□□□ -2.07
Scn8aQ9WTU3 Olfr1479-ps1-201ENSMUST00000207752 382 ntBASIC2.1□□□□□ -2.07
Scn8aQ9WTU3 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC2.1□□□□□ -2.07
Scn8aQ9WTU3 Vmn1r6-201ENSMUST00000079669 1058 ntAPPRIS P2 BASIC2.1□□□□□ -2.07
Scn8aQ9WTU3 Gm44133-202ENSMUST00000204450 2586 ntBASIC2.1□□□□□ -2.07
Scn8aQ9WTU3 Zfp936-201ENSMUST00000072829 1368 ntTSL 5 BASIC2.1□□□□□ -2.07
Scn8aQ9WTU3 Esp3-201ENSMUST00000177574 1316 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
Scn8aQ9WTU3 Rpl30-ps3-201ENSMUST00000117928 348 ntBASIC2.1□□□□□ -2.07
Scn8aQ9WTU3 Gm25339-201ENSMUST00000157458 232 ntBASIC2.1□□□□□ -2.07
Scn8aQ9WTU3 Gm25525-201ENSMUST00000177701 107 ntBASIC2.1□□□□□ -2.07
Scn8aQ9WTU3 Gm26178-201ENSMUST00000177706 107 ntBASIC2.1□□□□□ -2.07
Scn8aQ9WTU3 Gm26465-201ENSMUST00000178517 107 ntBASIC2.1□□□□□ -2.07
Scn8aQ9WTU3 Gm24317-201ENSMUST00000178536 107 ntBASIC2.1□□□□□ -2.07
Scn8aQ9WTU3 Gm25021-201ENSMUST00000179184 107 ntBASIC2.1□□□□□ -2.07
Scn8aQ9WTU3 Gm22995-201ENSMUST00000179670 107 ntBASIC2.1□□□□□ -2.07
Scn8aQ9WTU3 Gm24424-201ENSMUST00000179714 107 ntBASIC2.1□□□□□ -2.07
Scn8aQ9WTU3 Gm24389-201ENSMUST00000179962 107 ntBASIC2.1□□□□□ -2.07
Scn8aQ9WTU3 Gm25672-201ENSMUST00000180111 107 ntBASIC2.1□□□□□ -2.07
Scn8aQ9WTU3 Gm29163-201ENSMUST00000188029 107 ntBASIC2.1□□□□□ -2.07
Scn8aQ9WTU3 Gm37550-201ENSMUST00000193230 463 ntBASIC2.1□□□□□ -2.07
Scn8aQ9WTU3 AC161250.1-201ENSMUST00000213426 1111 ntBASIC2.1□□□□□ -2.07
Scn8aQ9WTU3 AC153532.1-201ENSMUST00000218126 1111 ntBASIC2.1□□□□□ -2.07
Scn8aQ9WTU3 AC139754.1-201ENSMUST00000219418 950 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
Scn8aQ9WTU3 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC2.1□□□□□ -2.07
Scn8aQ9WTU3 Gm46389-201ENSMUST00000223199 392 ntBASIC2.1□□□□□ -2.07
Scn8aQ9WTU3 AC117814.1-201ENSMUST00000226135 352 ntBASIC2.1□□□□□ -2.07
Scn8aQ9WTU3 Gm24661-201ENSMUST00000083205 104 ntBASIC2.1□□□□□ -2.07
Scn8aQ9WTU3 Gm23815-201ENSMUST00000083231 107 ntBASIC2.1□□□□□ -2.07
Scn8aQ9WTU3 Gm22971-201ENSMUST00000083305 97 ntBASIC2.1□□□□□ -2.07
Scn8aQ9WTU3 Gm23520-201ENSMUST00000093736 107 ntBASIC2.1□□□□□ -2.07
Scn8aQ9WTU3 Olfr1289-201ENSMUST00000120021 1643 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.07
Scn8aQ9WTU3 Dppa1-202ENSMUST00000109227 551 ntAPPRIS P1 TSL 2 BASIC2.09□□□□□ -2.07
Scn8aQ9WTU3 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC2.09□□□□□ -2.07
Scn8aQ9WTU3 Gm13406-201ENSMUST00000121991 256 ntBASIC2.09□□□□□ -2.07
Scn8aQ9WTU3 Gm15178-201ENSMUST00000132100 472 ntTSL 5 BASIC2.09□□□□□ -2.07
Scn8aQ9WTU3 Gm23467-201ENSMUST00000157127 159 ntBASIC2.09□□□□□ -2.07
Scn8aQ9WTU3 Mir1927-201ENSMUST00000158579 109 ntBASIC2.09□□□□□ -2.07
Scn8aQ9WTU3 Mir669n-201ENSMUST00000158636 54 ntBASIC2.09□□□□□ -2.07
Scn8aQ9WTU3 Gm17711-201ENSMUST00000172028 237 ntBASIC2.09□□□□□ -2.07
Scn8aQ9WTU3 Vmn2r-ps75-201ENSMUST00000173251 213 ntBASIC2.09□□□□□ -2.07
Scn8aQ9WTU3 Vmn1r-ps67-201ENSMUST00000173843 691 ntBASIC2.09□□□□□ -2.07
Scn8aQ9WTU3 Vmn1r-ps148-201ENSMUST00000176775 455 ntBASIC2.09□□□□□ -2.07
Scn8aQ9WTU3 Esp38-201ENSMUST00000178880 243 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
Scn8aQ9WTU3 Gm20773-201ENSMUST00000178940 681 ntBASIC2.09□□□□□ -2.07
Scn8aQ9WTU3 Anks1b-207ENSMUST00000182045 544 ntTSL 3 BASIC2.09□□□□□ -2.07
Scn8aQ9WTU3 Gm29658-201ENSMUST00000185404 230 ntBASIC2.09□□□□□ -2.07
Scn8aQ9WTU3 Gm28730-201ENSMUST00000185939 702 ntTSL 5 BASIC2.09□□□□□ -2.07
Scn8aQ9WTU3 Gm28191-201ENSMUST00000189112 211 ntBASIC2.09□□□□□ -2.07
Scn8aQ9WTU3 Gm19498-201ENSMUST00000191128 331 ntBASIC2.09□□□□□ -2.07
Scn8aQ9WTU3 Gm29433-201ENSMUST00000191241 253 ntTSL 5 BASIC2.09□□□□□ -2.07
Scn8aQ9WTU3 Gm37417-201ENSMUST00000195257 454 ntBASIC2.09□□□□□ -2.07
Scn8aQ9WTU3 Gm44092-201ENSMUST00000204470 258 ntBASIC2.09□□□□□ -2.07
Scn8aQ9WTU3 Gm33501-202ENSMUST00000209983 706 ntTSL 5 BASIC2.09□□□□□ -2.07
Scn8aQ9WTU3 AC140381.1-201ENSMUST00000219168 367 ntTSL 2 BASIC2.09□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 79.9 ms