Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Olfr1008-201ENSMUST00000054868 942 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
Scn11aQ9R053 Zfp930-201ENSMUST00000110216 1323 ntTSL 5 BASIC2.42□□□□□ -2.02
Scn11aQ9R053 Csnka2ip-201ENSMUST00000089279 1336 ntAPPRIS P2 BASIC2.42□□□□□ -2.02
Scn11aQ9R053 Dst-201ENSMUST00000097785 23251 ntAPPRIS P4 TSL 1 (best) BASIC2.42□□□□□ -2.02
Scn11aQ9R053 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC2.41□□□□□ -2.02
Scn11aQ9R053 Dppa1-202ENSMUST00000109227 551 ntAPPRIS P1 TSL 2 BASIC2.41□□□□□ -2.02
Scn11aQ9R053 Vmn1r-ps85-201ENSMUST00000173029 890 ntBASIC2.41□□□□□ -2.02
Scn11aQ9R053 1110015O18Rik-201ENSMUST00000183632 570 ntTSL 3 BASIC2.41□□□□□ -2.02
Scn11aQ9R053 Gm27894-201ENSMUST00000184177 92 ntBASIC2.41□□□□□ -2.02
Scn11aQ9R053 Gm29597-201ENSMUST00000188035 308 ntBASIC2.41□□□□□ -2.02
Scn11aQ9R053 9830004L10Rik-202ENSMUST00000188074 687 ntTSL 5 BASIC2.41□□□□□ -2.02
Scn11aQ9R053 Olfr1233-204ENSMUST00000216561 1192 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Scn11aQ9R053 Gm18899-201ENSMUST00000217663 546 ntBASIC2.41□□□□□ -2.02
Scn11aQ9R053 Olfr116-202ENSMUST00000216128 4477 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Scn11aQ9R053 Srsy-201ENSMUST00000179900 1618 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
Scn11aQ9R053 Gm773-201ENSMUST00000101561 951 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
Scn11aQ9R053 Rpl30-ps3-201ENSMUST00000117928 348 ntBASIC2.41□□□□□ -2.02
Scn11aQ9R053 Gm13627-201ENSMUST00000119700 706 ntBASIC2.41□□□□□ -2.02
Scn11aQ9R053 Gm13470-201ENSMUST00000123911 421 ntTSL 2 BASIC2.41□□□□□ -2.02
Scn11aQ9R053 Gm20776-201ENSMUST00000189940 700 ntBASIC2.41□□□□□ -2.02
Scn11aQ9R053 CT030187.1-201ENSMUST00000220605 252 ntBASIC2.41□□□□□ -2.02
Scn11aQ9R053 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.02
Scn11aQ9R053 Olfr1166-202ENSMUST00000217575 2004 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.02
Scn11aQ9R053 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.03
Scn11aQ9R053 Vmn1r30-203ENSMUST00000227466 1798 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
Scn11aQ9R053 Olfr1288-201ENSMUST00000104889 939 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
Scn11aQ9R053 Gm22072-201ENSMUST00000116850 121 ntBASIC2.4□□□□□ -2.03
Scn11aQ9R053 Gm7209-201ENSMUST00000122339 333 ntBASIC2.4□□□□□ -2.03
Scn11aQ9R053 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC2.4□□□□□ -2.03
Scn11aQ9R053 Gm2878-201ENSMUST00000170173 486 ntBASIC2.4□□□□□ -2.03
Scn11aQ9R053 Gm44817-201ENSMUST00000205416 453 ntBASIC2.4□□□□□ -2.03
Scn11aQ9R053 AC241593.1-201ENSMUST00000224768 397 ntBASIC2.4□□□□□ -2.03
Scn11aQ9R053 Vmn1r72-201ENSMUST00000053134 921 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
Scn11aQ9R053 Gm7984-201ENSMUST00000060640 538 ntBASIC2.4□□□□□ -2.03
Scn11aQ9R053 Gm24661-201ENSMUST00000083205 104 ntBASIC2.4□□□□□ -2.03
Scn11aQ9R053 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
Scn11aQ9R053 Gm8080-201ENSMUST00000122046 1155 ntBASIC2.39□□□□□ -2.03
Scn11aQ9R053 Rpl39-ps-201ENSMUST00000142604 355 ntBASIC2.39□□□□□ -2.03
Scn11aQ9R053 Gm19177-201ENSMUST00000204520 613 ntBASIC2.39□□□□□ -2.03
Scn11aQ9R053 Bsph1-202ENSMUST00000204715 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
Scn11aQ9R053 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
Scn11aQ9R053 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
Scn11aQ9R053 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC2.39□□□□□ -2.03
Scn11aQ9R053 Gm38265-201ENSMUST00000193479 3766 ntBASIC2.39□□□□□ -2.03
Scn11aQ9R053 Gm14229-201ENSMUST00000121178 850 ntBASIC2.38□□□□□ -2.03
Scn11aQ9R053 Gm22554-201ENSMUST00000157798 147 ntBASIC2.38□□□□□ -2.03
Scn11aQ9R053 Rpl30-ps6-201ENSMUST00000163337 348 ntBASIC2.38□□□□□ -2.03
Scn11aQ9R053 4921511M17Rik-201ENSMUST00000177994 984 ntAPPRIS P1 TSL 2 BASIC2.38□□□□□ -2.03
Scn11aQ9R053 Samt1-201ENSMUST00000178342 984 ntAPPRIS P1 TSL 2 BASIC2.38□□□□□ -2.03
Scn11aQ9R053 Samt1-202ENSMUST00000178698 834 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
Scn11aQ9R053 4921511M17Rik-202ENSMUST00000179369 834 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
Scn11aQ9R053 Gm37428-201ENSMUST00000193886 137 ntBASIC2.38□□□□□ -2.03
Scn11aQ9R053 Gm7675-201ENSMUST00000208828 686 ntBASIC2.38□□□□□ -2.03
Scn11aQ9R053 Gm20304-201ENSMUST00000218168 444 ntBASIC2.38□□□□□ -2.03
Scn11aQ9R053 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
Scn11aQ9R053 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
Scn11aQ9R053 Gm25090-201ENSMUST00000104000 132 ntBASIC2.38□□□□□ -2.03
Scn11aQ9R053 Gm12803-201ENSMUST00000118907 821 ntBASIC2.38□□□□□ -2.03
Scn11aQ9R053 Gm22727-201ENSMUST00000158090 116 ntBASIC2.38□□□□□ -2.03
Scn11aQ9R053 Gm27753-201ENSMUST00000184742 203 ntBASIC2.38□□□□□ -2.03
Scn11aQ9R053 Gm18727-201ENSMUST00000185981 553 ntBASIC2.38□□□□□ -2.03
Scn11aQ9R053 Gm43954-201ENSMUST00000204634 544 ntBASIC2.38□□□□□ -2.03
Scn11aQ9R053 Gm29884-201ENSMUST00000218403 453 ntBASIC2.38□□□□□ -2.03
Scn11aQ9R053 Gm22683-201ENSMUST00000082854 137 ntBASIC2.38□□□□□ -2.03
Scn11aQ9R053 Mgat4c-211ENSMUST00000163753 3862 ntAPPRIS P1 TSL 3 BASIC2.37□□□□□ -2.03
Scn11aQ9R053 Gm14819-201ENSMUST00000101645 928 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
Scn11aQ9R053 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC2.37□□□□□ -2.03
Scn11aQ9R053 Gm9022-202ENSMUST00000183285 483 ntBASIC2.37□□□□□ -2.03
Scn11aQ9R053 Gm29604-201ENSMUST00000187176 163 ntBASIC2.37□□□□□ -2.03
Scn11aQ9R053 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC2.37□□□□□ -2.03
Scn11aQ9R053 AC141642.1-201ENSMUST00000220598 229 ntBASIC2.37□□□□□ -2.03
Scn11aQ9R053 AC122465.2-201ENSMUST00000221774 354 ntBASIC2.37□□□□□ -2.03
Scn11aQ9R053 AC154532.2-201ENSMUST00000228947 598 ntBASIC2.37□□□□□ -2.03
Scn11aQ9R053 Olfr679-204ENSMUST00000215704 5018 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Scn11aQ9R053 Olfr389-203ENSMUST00000215418 3417 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Scn11aQ9R053 Olfr810-202ENSMUST00000214206 4809 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Scn11aQ9R053 Gm23234-201ENSMUST00000157304 134 ntBASIC2.36□□□□□ -2.03
Scn11aQ9R053 Mir6985-201ENSMUST00000184641 61 ntBASIC2.36□□□□□ -2.03
Scn11aQ9R053 Gm29926-201ENSMUST00000201443 660 ntTSL 3 BASIC2.36□□□□□ -2.03
Scn11aQ9R053 Klra13-ps-204ENSMUST00000205252 640 ntTSL 3 BASIC2.36□□□□□ -2.03
Scn11aQ9R053 AC140210.1-201ENSMUST00000224961 534 ntBASIC2.36□□□□□ -2.03
Scn11aQ9R053 CT025525.1-201ENSMUST00000226325 1054 ntBASIC2.36□□□□□ -2.03
Scn11aQ9R053 Tas2r123-201ENSMUST00000071696 1002 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Scn11aQ9R053 Olfr191-201ENSMUST00000078517 930 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Scn11aQ9R053 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
Scn11aQ9R053 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Scn11aQ9R053 Olfr811-204ENSMUST00000217571 2399 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Scn11aQ9R053 Olfr1183-201ENSMUST00000102618 912 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Scn11aQ9R053 Gm15951-201ENSMUST00000118377 400 ntBASIC2.36□□□□□ -2.03
Scn11aQ9R053 Gm13755-201ENSMUST00000118509 305 ntBASIC2.36□□□□□ -2.03
Scn11aQ9R053 Gm12721-201ENSMUST00000120621 268 ntBASIC2.36□□□□□ -2.03
Scn11aQ9R053 Gm13661-201ENSMUST00000154297 318 ntTSL 3 BASIC2.36□□□□□ -2.03
Scn11aQ9R053 Gm23470-201ENSMUST00000157129 120 ntBASIC2.36□□□□□ -2.03
Scn11aQ9R053 Vmn2r-ps84-201ENSMUST00000173377 897 ntBASIC2.36□□□□□ -2.03
Scn11aQ9R053 Vmn1r-ps58-201ENSMUST00000174460 840 ntBASIC2.36□□□□□ -2.03
Scn11aQ9R053 Gm7039-201ENSMUST00000205138 346 ntBASIC2.36□□□□□ -2.03
Scn11aQ9R053 Gm43896-201ENSMUST00000203440 2032 ntBASIC2.35□□□□□ -2.03
Scn11aQ9R053 Gm13614-201ENSMUST00000117306 503 ntBASIC2.35□□□□□ -2.03
Scn11aQ9R053 Gm26406-201ENSMUST00000158503 124 ntBASIC2.35□□□□□ -2.03
Scn11aQ9R053 Olfr421-ps1-201ENSMUST00000179386 1050 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 77.3 ms