Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Gm23895-201ENSMUST00000158108 160 ntBASIC2.65□□□□□ -1.99
Use1Q9CQ56 Gm24876-201ENSMUST00000158780 92 ntBASIC2.65□□□□□ -1.99
Use1Q9CQ56 Vmn1r-ps152-201ENSMUST00000176452 699 ntBASIC2.65□□□□□ -1.99
Use1Q9CQ56 Gm24925-201ENSMUST00000178157 107 ntBASIC2.65□□□□□ -1.99
Use1Q9CQ56 Mir6372-201ENSMUST00000185114 109 ntBASIC2.65□□□□□ -1.99
Use1Q9CQ56 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC2.65□□□□□ -1.99
Use1Q9CQ56 Gm33819-201ENSMUST00000194008 1221 ntTSL 3 BASIC2.65□□□□□ -1.99
Use1Q9CQ56 Gm37853-201ENSMUST00000195748 660 ntTSL 3 BASIC2.65□□□□□ -1.99
Use1Q9CQ56 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC2.65□□□□□ -1.99
Use1Q9CQ56 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC2.65□□□□□ -1.99
Use1Q9CQ56 Gm43228-201ENSMUST00000200735 264 ntBASIC2.65□□□□□ -1.99
Use1Q9CQ56 Gm44594-201ENSMUST00000208982 407 ntBASIC2.65□□□□□ -1.99
Use1Q9CQ56 AC167721.1-201ENSMUST00000217088 279 ntBASIC2.65□□□□□ -1.99
Use1Q9CQ56 AC154552.4-201ENSMUST00000222171 151 ntBASIC2.65□□□□□ -1.99
Use1Q9CQ56 Olfr348-201ENSMUST00000056865 942 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
Use1Q9CQ56 Gm25403-201ENSMUST00000082971 143 ntBASIC2.65□□□□□ -1.99
Use1Q9CQ56 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC2.65□□□□□ -1.99
Use1Q9CQ56 AC164164.1-201ENSMUST00000223245 2340 ntBASIC2.65□□□□□ -1.99
Use1Q9CQ56 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC2.65□□□□□ -1.99
Use1Q9CQ56 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
Use1Q9CQ56 Gm42445-201ENSMUST00000196996 2893 ntBASIC2.64□□□□□ -1.99
Use1Q9CQ56 Gm25313-201ENSMUST00000101817 116 ntBASIC2.64□□□□□ -1.99
Use1Q9CQ56 Gm22939-201ENSMUST00000103958 131 ntBASIC2.64□□□□□ -1.99
Use1Q9CQ56 Gm14020-201ENSMUST00000118165 662 ntBASIC2.64□□□□□ -1.99
Use1Q9CQ56 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC2.64□□□□□ -1.99
Use1Q9CQ56 Gm14940-201ENSMUST00000119309 495 ntBASIC2.64□□□□□ -1.99
Use1Q9CQ56 Mup-ps17-201ENSMUST00000120723 218 ntBASIC2.64□□□□□ -1.99
Use1Q9CQ56 Gm12755-201ENSMUST00000122297 282 ntBASIC2.64□□□□□ -1.99
Use1Q9CQ56 Gm11665-201ENSMUST00000148136 285 ntTSL 5 BASIC2.64□□□□□ -1.99
Use1Q9CQ56 Gm25666-201ENSMUST00000157702 107 ntBASIC2.64□□□□□ -1.99
Use1Q9CQ56 Gm24190-201ENSMUST00000157976 216 ntBASIC2.64□□□□□ -1.99
Use1Q9CQ56 Gm22416-201ENSMUST00000158590 88 ntBASIC2.64□□□□□ -1.99
Use1Q9CQ56 Gm24552-201ENSMUST00000158646 103 ntBASIC2.64□□□□□ -1.99
Use1Q9CQ56 Gm25119-201ENSMUST00000158815 88 ntBASIC2.64□□□□□ -1.99
Use1Q9CQ56 Gm8338-201ENSMUST00000163928 363 ntBASIC2.64□□□□□ -1.99
Use1Q9CQ56 Snord53-201ENSMUST00000175146 78 ntBASIC2.64□□□□□ -1.99
Use1Q9CQ56 Vmn1r7-201ENSMUST00000176252 1219 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
Use1Q9CQ56 1700001F09Rik-201ENSMUST00000178178 884 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
Use1Q9CQ56 Gm23287-201ENSMUST00000179427 116 ntBASIC2.64□□□□□ -1.99
Use1Q9CQ56 Gm23143-201ENSMUST00000180137 116 ntBASIC2.64□□□□□ -1.99
Use1Q9CQ56 Gm27470-201ENSMUST00000184070 210 ntBASIC2.64□□□□□ -1.99
Use1Q9CQ56 Gm27330-201ENSMUST00000184689 132 ntBASIC2.64□□□□□ -1.99
Use1Q9CQ56 Mir7028-201ENSMUST00000185016 64 ntBASIC2.64□□□□□ -1.99
Use1Q9CQ56 Gm17916-203ENSMUST00000189918 324 ntTSL 5 BASIC2.64□□□□□ -1.99
Use1Q9CQ56 Gm37684-201ENSMUST00000192779 355 ntBASIC2.64□□□□□ -1.99
Use1Q9CQ56 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC2.64□□□□□ -1.99
Use1Q9CQ56 Gm34732-201ENSMUST00000195441 445 ntTSL 3 BASIC2.64□□□□□ -1.99
Use1Q9CQ56 Trav12-4-201ENSMUST00000200663 271 ntBASIC2.64□□□□□ -1.99
Use1Q9CQ56 A530053G22Rik-204ENSMUST00000204579 536 ntTSL 2 BASIC2.64□□□□□ -1.99
Use1Q9CQ56 A930027P06Rik-201ENSMUST00000221298 2975 ntBASIC2.64□□□□□ -1.99
Use1Q9CQ56 CT030662.1-201ENSMUST00000227380 232 ntBASIC2.64□□□□□ -1.99
Use1Q9CQ56 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
Use1Q9CQ56 Scgb1b2-201ENSMUST00000080635 424 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
Use1Q9CQ56 Mup5-201ENSMUST00000082287 925 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
Use1Q9CQ56 Gm24871-201ENSMUST00000083099 116 ntBASIC2.64□□□□□ -1.99
Use1Q9CQ56 Olfr1453-201ENSMUST00000087773 924 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
Use1Q9CQ56 Rnu5g-201ENSMUST00000093721 116 ntBASIC2.64□□□□□ -1.99
Use1Q9CQ56 AC124561.2-201ENSMUST00000226657 1973 ntBASIC2.63□□□□□ -1.99
Use1Q9CQ56 Olfr1487-204ENSMUST00000216688 2038 ntTSL 5 BASIC2.63□□□□□ -1.99
Use1Q9CQ56 Trbv3-201ENSMUST00000103264 455 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
Use1Q9CQ56 Gm14469-201ENSMUST00000118363 202 ntBASIC2.63□□□□□ -1.99
Use1Q9CQ56 Gm7429-201ENSMUST00000118664 348 ntBASIC2.63□□□□□ -1.99
Use1Q9CQ56 Gm14554-201ENSMUST00000119548 661 ntBASIC2.63□□□□□ -1.99
Use1Q9CQ56 Prl2c5-202ENSMUST00000126540 971 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
Use1Q9CQ56 Gm15243-201ENSMUST00000151101 382 ntTSL 2 BASIC2.63□□□□□ -1.99
Use1Q9CQ56 1700013N06Rik-201ENSMUST00000156376 663 ntTSL 5 BASIC2.63□□□□□ -1.99
Use1Q9CQ56 Gm24534-201ENSMUST00000157949 291 ntBASIC2.63□□□□□ -1.99
Use1Q9CQ56 Gm23409-201ENSMUST00000158516 237 ntBASIC2.63□□□□□ -1.99
Use1Q9CQ56 Gm24080-201ENSMUST00000175178 232 ntBASIC2.63□□□□□ -1.99
Use1Q9CQ56 Snord93-201ENSMUST00000175580 71 ntBASIC2.63□□□□□ -1.99
Use1Q9CQ56 Gm6900-201ENSMUST00000178971 342 ntBASIC2.63□□□□□ -1.99
Use1Q9CQ56 Gm27007-201ENSMUST00000183264 279 ntTSL 3 BASIC2.63□□□□□ -1.99
Use1Q9CQ56 Mir6411-201ENSMUST00000183556 108 ntBASIC2.63□□□□□ -1.99
Use1Q9CQ56 Gm27520-201ENSMUST00000184872 81 ntBASIC2.63□□□□□ -1.99
Use1Q9CQ56 Gm18448-201ENSMUST00000186286 599 ntBASIC2.63□□□□□ -1.99
Use1Q9CQ56 Gm28647-201ENSMUST00000188416 197 ntBASIC2.63□□□□□ -1.99
Use1Q9CQ56 Gm9931-201ENSMUST00000193584 1185 ntBASIC2.63□□□□□ -1.99
Use1Q9CQ56 Fbxw15-203ENSMUST00000198397 927 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
Use1Q9CQ56 Gm44137-201ENSMUST00000203670 367 ntBASIC2.63□□□□□ -1.99
Use1Q9CQ56 Gm45455-202ENSMUST00000211156 630 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
Use1Q9CQ56 Gm7948-201ENSMUST00000212607 844 ntBASIC2.63□□□□□ -1.99
Use1Q9CQ56 AC114575.1-201ENSMUST00000218634 353 ntTSL 3 BASIC2.63□□□□□ -1.99
Use1Q9CQ56 Gm31849-201ENSMUST00000220306 375 ntBASIC2.63□□□□□ -1.99
Use1Q9CQ56 CT030184.1-201ENSMUST00000222393 416 ntBASIC2.63□□□□□ -1.99
Use1Q9CQ56 AC117656.3-204ENSMUST00000225656 859 ntBASIC2.63□□□□□ -1.99
Use1Q9CQ56 AC147628.1-201ENSMUST00000228193 688 ntBASIC2.63□□□□□ -1.99
Use1Q9CQ56 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
Use1Q9CQ56 Olfr1466-201ENSMUST00000075868 933 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
Use1Q9CQ56 Ogn-201ENSMUST00000021822 2566 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
Use1Q9CQ56 Gm2026-201ENSMUST00000109007 1621 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
Use1Q9CQ56 Gm44679-201ENSMUST00000207202 2908 ntBASIC2.63□□□□□ -1.99
Use1Q9CQ56 Cpxcr1-201ENSMUST00000101269 1596 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
Use1Q9CQ56 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
Use1Q9CQ56 Celf2-203ENSMUST00000114923 529 ntTSL 3 BASIC2.62□□□□□ -1.99
Use1Q9CQ56 Gm13096-201ENSMUST00000127752 251 ntTSL 5 BASIC2.62□□□□□ -1.99
Use1Q9CQ56 Gm24787-201ENSMUST00000157380 123 ntBASIC2.62□□□□□ -1.99
Use1Q9CQ56 Scgb2b23-ps-202ENSMUST00000167012 516 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
Use1Q9CQ56 Vmn1r-ps56-201ENSMUST00000172769 965 ntBASIC2.62□□□□□ -1.99
Use1Q9CQ56 Vmn1r-ps19-201ENSMUST00000177008 926 ntBASIC2.62□□□□□ -1.99
Use1Q9CQ56 Gm13147-202ENSMUST00000177526 1173 ntBASIC2.62□□□□□ -1.99
Retrieved 100 of 76,532 protein–RNA pairs in 93.9 ms