Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Gm12646-201ENSMUST00000119144 238 ntBASIC4.23□□□□□ -1.73
Trim8Q99PJ2 Gm13475-201ENSMUST00000119290 234 ntBASIC4.23□□□□□ -1.73
Trim8Q99PJ2 Gm12122-201ENSMUST00000124503 454 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Trim8Q99PJ2 Gm15767-202ENSMUST00000153786 544 ntTSL 3 BASIC4.23□□□□□ -1.73
Trim8Q99PJ2 Gm23234-201ENSMUST00000157304 134 ntBASIC4.23□□□□□ -1.73
Trim8Q99PJ2 Gm24419-201ENSMUST00000157875 332 ntBASIC4.23□□□□□ -1.73
Trim8Q99PJ2 Gm26034-201ENSMUST00000158154 116 ntBASIC4.23□□□□□ -1.73
Trim8Q99PJ2 Vmn2r-ps70-201ENSMUST00000174636 302 ntBASIC4.23□□□□□ -1.73
Trim8Q99PJ2 Gm22851-201ENSMUST00000178741 94 ntBASIC4.23□□□□□ -1.73
Trim8Q99PJ2 Cox6b2-208ENSMUST00000183971 401 ntTSL 5 BASIC4.23□□□□□ -1.73
Trim8Q99PJ2 Gm8296-201ENSMUST00000185597 524 ntBASIC4.23□□□□□ -1.73
Trim8Q99PJ2 Gm28263-201ENSMUST00000185884 400 ntBASIC4.23□□□□□ -1.73
Trim8Q99PJ2 Nabp1-207ENSMUST00000188204 972 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Trim8Q99PJ2 Gm29229-201ENSMUST00000188874 323 ntBASIC4.23□□□□□ -1.73
Trim8Q99PJ2 Gm18956-201ENSMUST00000192857 480 ntBASIC4.23□□□□□ -1.73
Trim8Q99PJ2 Gm37290-201ENSMUST00000195775 339 ntBASIC4.23□□□□□ -1.73
Trim8Q99PJ2 Mir3970-201ENSMUST00000199287 90 ntBASIC4.23□□□□□ -1.73
Trim8Q99PJ2 Gm34583-202ENSMUST00000202537 451 ntTSL 2 BASIC4.23□□□□□ -1.73
Trim8Q99PJ2 Gm43449-201ENSMUST00000202955 371 ntTSL 3 BASIC4.23□□□□□ -1.73
Trim8Q99PJ2 Gm44032-201ENSMUST00000204841 166 ntBASIC4.23□□□□□ -1.73
Trim8Q99PJ2 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC4.23□□□□□ -1.73
Trim8Q99PJ2 Nat1-202ENSMUST00000212171 1208 ntAPPRIS ALT1 TSL 5 BASIC4.23□□□□□ -1.73
Trim8Q99PJ2 Prl2c5-201ENSMUST00000021778 844 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
Trim8Q99PJ2 AC154603.1-201ENSMUST00000224355 313 ntBASIC4.23□□□□□ -1.73
Trim8Q99PJ2 AC147545.1-201ENSMUST00000227528 108 ntBASIC4.23□□□□□ -1.73
Trim8Q99PJ2 Gm23627-201ENSMUST00000082459 107 ntBASIC4.23□□□□□ -1.73
Trim8Q99PJ2 Gm22502-201ENSMUST00000082488 107 ntBASIC4.23□□□□□ -1.73
Trim8Q99PJ2 Gm24149-201ENSMUST00000082757 107 ntBASIC4.23□□□□□ -1.73
Trim8Q99PJ2 Gm24764-201ENSMUST00000083686 199 ntBASIC4.23□□□□□ -1.73
Trim8Q99PJ2 Gm22350-201ENSMUST00000083924 156 ntBASIC4.23□□□□□ -1.73
Trim8Q99PJ2 Ddx60-202ENSMUST00000093485 5989 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
Trim8Q99PJ2 Olfr1270-202ENSMUST00000213946 4930 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Trim8Q99PJ2 Srek1-204ENSMUST00000210489 6330 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Trim8Q99PJ2 Olfr1012-202ENSMUST00000214255 3115 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Trim8Q99PJ2 Gm15319-201ENSMUST00000084046 2522 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Trim8Q99PJ2 Ifi213-201ENSMUST00000097462 2680 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
Trim8Q99PJ2 Gm42639-201ENSMUST00000197061 1871 ntBASIC4.22□□□□□ -1.73
Trim8Q99PJ2 n-R5s219-201ENSMUST00000104328 132 ntBASIC4.22□□□□□ -1.73
Trim8Q99PJ2 Gm24079-201ENSMUST00000104352 132 ntBASIC4.22□□□□□ -1.73
Trim8Q99PJ2 Gm23653-201ENSMUST00000116751 97 ntBASIC4.22□□□□□ -1.73
Trim8Q99PJ2 Gm14681-201ENSMUST00000118047 411 ntBASIC4.22□□□□□ -1.73
Trim8Q99PJ2 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC4.22□□□□□ -1.73
Trim8Q99PJ2 Gm13228-201ENSMUST00000118937 634 ntBASIC4.22□□□□□ -1.73
Trim8Q99PJ2 Gm14049-201ENSMUST00000121009 636 ntBASIC4.22□□□□□ -1.73
Trim8Q99PJ2 Gm25278-201ENSMUST00000157267 120 ntBASIC4.22□□□□□ -1.73
Trim8Q99PJ2 Gm25665-201ENSMUST00000157695 110 ntBASIC4.22□□□□□ -1.73
Trim8Q99PJ2 Slc9c1-201ENSMUST00000159945 3836 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Trim8Q99PJ2 Vmn1r-ps32-201ENSMUST00000174389 956 ntBASIC4.22□□□□□ -1.73
Trim8Q99PJ2 Vmn2r-ps23-201ENSMUST00000178719 571 ntBASIC4.22□□□□□ -1.73
Trim8Q99PJ2 Mir7031-201ENSMUST00000183860 65 ntBASIC4.22□□□□□ -1.73
Trim8Q99PJ2 1700010I02Rik-201ENSMUST00000187729 438 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Trim8Q99PJ2 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC4.22□□□□□ -1.73
Trim8Q99PJ2 Gm9722-201ENSMUST00000194568 802 ntBASIC4.22□□□□□ -1.73
Trim8Q99PJ2 Gm19620-201ENSMUST00000195972 434 ntBASIC4.22□□□□□ -1.73
Trim8Q99PJ2 Gm43804-201ENSMUST00000198280 456 ntBASIC4.22□□□□□ -1.73
Trim8Q99PJ2 Gm45052-201ENSMUST00000206457 405 ntTSL 2 BASIC4.22□□□□□ -1.73
Trim8Q99PJ2 AC132437.1-201ENSMUST00000218308 320 ntBASIC4.22□□□□□ -1.73
Trim8Q99PJ2 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC4.22□□□□□ -1.73
Trim8Q99PJ2 CT010506.2-201ENSMUST00000225618 183 ntBASIC4.22□□□□□ -1.73
Trim8Q99PJ2 Gm22572-201ENSMUST00000082985 105 ntBASIC4.22□□□□□ -1.73
Trim8Q99PJ2 1700008P02Rik-201ENSMUST00000091364 783 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Trim8Q99PJ2 Syne2-201ENSMUST00000044217 21690 ntAPPRIS P2 TSL 5 BASIC4.22□□□□□ -1.73
Trim8Q99PJ2 Gm35191-201ENSMUST00000200925 2475 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Trim8Q99PJ2 Zp3r-201ENSMUST00000039862 2042 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
Trim8Q99PJ2 Zfp300-201ENSMUST00000040667 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Trim8Q99PJ2 Gm40020-201ENSMUST00000215677 1635 ntBASIC4.21□□□□□ -1.73
Trim8Q99PJ2 Gm44679-201ENSMUST00000207202 2908 ntBASIC4.21□□□□□ -1.74
Trim8Q99PJ2 Mir690-201ENSMUST00000102110 109 ntBASIC4.21□□□□□ -1.74
Trim8Q99PJ2 Gm23014-201ENSMUST00000104144 130 ntBASIC4.21□□□□□ -1.74
Trim8Q99PJ2 Gm11432-201ENSMUST00000117334 231 ntBASIC4.21□□□□□ -1.74
Trim8Q99PJ2 Gm14067-201ENSMUST00000119340 314 ntBASIC4.21□□□□□ -1.74
Trim8Q99PJ2 Gm13804-201ENSMUST00000119552 172 ntBASIC4.21□□□□□ -1.74
Trim8Q99PJ2 Gm11693-201ENSMUST00000119625 565 ntBASIC4.21□□□□□ -1.74
Trim8Q99PJ2 Gm15112-201ENSMUST00000120152 860 ntBASIC4.21□□□□□ -1.74
Trim8Q99PJ2 Gm12466-201ENSMUST00000121199 620 ntBASIC4.21□□□□□ -1.74
Trim8Q99PJ2 Gm14408-202ENSMUST00000126726 279 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Trim8Q99PJ2 Gm14364-201ENSMUST00000129209 267 ntBASIC4.21□□□□□ -1.74
Trim8Q99PJ2 Gm15738-201ENSMUST00000131985 275 ntTSL 5 BASIC4.21□□□□□ -1.74
Trim8Q99PJ2 Gm15350-201ENSMUST00000135138 569 ntTSL 2 BASIC4.21□□□□□ -1.74
Trim8Q99PJ2 Gm25827-201ENSMUST00000157089 107 ntBASIC4.21□□□□□ -1.74
Trim8Q99PJ2 Gm24061-201ENSMUST00000157489 120 ntBASIC4.21□□□□□ -1.74
Trim8Q99PJ2 Gm27535-201ENSMUST00000183814 157 ntBASIC4.21□□□□□ -1.74
Trim8Q99PJ2 Mir6410-201ENSMUST00000184204 104 ntBASIC4.21□□□□□ -1.74
Trim8Q99PJ2 Mir1957b-201ENSMUST00000184608 123 ntBASIC4.21□□□□□ -1.74
Trim8Q99PJ2 Gm21735-201ENSMUST00000190360 696 ntBASIC4.21□□□□□ -1.74
Trim8Q99PJ2 Gm42695-201ENSMUST00000199445 818 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Trim8Q99PJ2 Gm6051-201ENSMUST00000201529 352 ntBASIC4.21□□□□□ -1.74
Trim8Q99PJ2 Gm19366-201ENSMUST00000206996 156 ntBASIC4.21□□□□□ -1.74
Trim8Q99PJ2 1700026F02Rik-205ENSMUST00000212266 787 ntTSL 5 BASIC4.21□□□□□ -1.74
Trim8Q99PJ2 AC133207.3-201ENSMUST00000217694 464 ntTSL 3 BASIC4.21□□□□□ -1.74
Trim8Q99PJ2 AC174459.2-201ENSMUST00000226036 160 ntBASIC4.21□□□□□ -1.74
Trim8Q99PJ2 Olfr474-201ENSMUST00000054434 933 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Trim8Q99PJ2 Gm4631-202ENSMUST00000121393 4402 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
Trim8Q99PJ2 Gm43844-201ENSMUST00000202926 5605 ntBASIC4.21□□□□□ -1.74
Trim8Q99PJ2 Olfr617-202ENSMUST00000215755 3000 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Trim8Q99PJ2 Olfr898-202ENSMUST00000216304 3979 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
Trim8Q99PJ2 Gm15261-201ENSMUST00000136779 2763 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Trim8Q99PJ2 Vmn1r45-208ENSMUST00000228662 3309 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Trim8Q99PJ2 Btbd35f10-201ENSMUST00000178621 1952 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Trim8Q99PJ2 Synpr-207ENSMUST00000223583 3362 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 80.2 ms