Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 AC122393.3-201ENSMUST00000226343 1059 ntBASIC2.54□□□□□ -2
Lsm1Q8VC85 Ly96-201ENSMUST00000026881 632 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Lsm1Q8VC85 Mir423-201ENSMUST00000083584 109 ntBASIC2.54□□□□□ -2
Lsm1Q8VC85 Olfr772-202ENSMUST00000214672 2955 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Lsm1Q8VC85 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC2.53□□□□□ -2
Lsm1Q8VC85 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC2.53□□□□□ -2
Lsm1Q8VC85 Gm14632-201ENSMUST00000101654 864 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Lsm1Q8VC85 Gm14602-201ENSMUST00000118625 340 ntBASIC2.53□□□□□ -2
Lsm1Q8VC85 Gm14845-201ENSMUST00000121259 306 ntBASIC2.53□□□□□ -2
Lsm1Q8VC85 Gm3470-201ENSMUST00000160819 420 ntBASIC2.53□□□□□ -2
Lsm1Q8VC85 AC154297.1-201ENSMUST00000171334 397 ntBASIC2.53□□□□□ -2
Lsm1Q8VC85 Vmn1r-ps27-201ENSMUST00000174619 985 ntBASIC2.53□□□□□ -2
Lsm1Q8VC85 Mir3473c-201ENSMUST00000175262 81 ntBASIC2.53□□□□□ -2
Lsm1Q8VC85 Prl3c1-203ENSMUST00000178072 579 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
Lsm1Q8VC85 Gm38127-201ENSMUST00000191978 468 ntTSL 5 BASIC2.53□□□□□ -2
Lsm1Q8VC85 Gm18403-201ENSMUST00000192907 529 ntBASIC2.53□□□□□ -2
Lsm1Q8VC85 Gm43224-201ENSMUST00000201567 898 ntBASIC2.53□□□□□ -2
Lsm1Q8VC85 Gm45341-201ENSMUST00000210850 1104 ntTSL 5 BASIC2.53□□□□□ -2
Lsm1Q8VC85 Olfr908-201ENSMUST00000215139 932 ntAPPRIS P1 BASIC2.53□□□□□ -2
Lsm1Q8VC85 Gm19233-201ENSMUST00000219772 936 ntBASIC2.53□□□□□ -2
Lsm1Q8VC85 AC153924.1-201ENSMUST00000220117 312 ntBASIC2.53□□□□□ -2
Lsm1Q8VC85 CT571268.1-201ENSMUST00000222320 407 ntBASIC2.53□□□□□ -2
Lsm1Q8VC85 Vmn1r24-202ENSMUST00000228315 891 ntAPPRIS P1 BASIC2.53□□□□□ -2
Lsm1Q8VC85 AC131029.2-202ENSMUST00000228430 496 ntBASIC2.53□□□□□ -2
Lsm1Q8VC85 AC165284.1-201ENSMUST00000228614 458 ntBASIC2.53□□□□□ -2
Lsm1Q8VC85 Olfr1442-201ENSMUST00000057924 1065 ntAPPRIS P1 BASIC2.53□□□□□ -2
Lsm1Q8VC85 Zfp982-201ENSMUST00000063704 1244 ntAPPRIS P1 TSL 3 BASIC2.53□□□□□ -2
Lsm1Q8VC85 Gm10147-201ENSMUST00000075388 864 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Lsm1Q8VC85 Gm44680-201ENSMUST00000208414 2910 ntBASIC2.53□□□□□ -2
Lsm1Q8VC85 CT009504.1-201ENSMUST00000218252 3330 ntBASIC2.53□□□□□ -2
Lsm1Q8VC85 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Lsm1Q8VC85 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Lsm1Q8VC85 Olfr837-202ENSMUST00000215699 3758 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Lsm1Q8VC85 Gm12787-201ENSMUST00000119234 396 ntBASIC2.52□□□□□ -2.01
Lsm1Q8VC85 Gm14940-201ENSMUST00000119309 495 ntBASIC2.52□□□□□ -2.01
Lsm1Q8VC85 Klrd1-203ENSMUST00000119520 919 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
Lsm1Q8VC85 Gm2012-201ENSMUST00000121900 1131 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Lsm1Q8VC85 Gm13424-201ENSMUST00000122301 354 ntBASIC2.52□□□□□ -2.01
Lsm1Q8VC85 Gm12023-201ENSMUST00000145182 520 ntTSL 5 BASIC2.52□□□□□ -2.01
Lsm1Q8VC85 Gm24291-201ENSMUST00000157633 162 ntBASIC2.52□□□□□ -2.01
Lsm1Q8VC85 Gm26411-201ENSMUST00000157668 107 ntBASIC2.52□□□□□ -2.01
Lsm1Q8VC85 Pate1-201ENSMUST00000170021 389 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Lsm1Q8VC85 Mir5099-201ENSMUST00000175257 74 ntBASIC2.52□□□□□ -2.01
Lsm1Q8VC85 Gm24417-201ENSMUST00000178123 79 ntBASIC2.52□□□□□ -2.01
Lsm1Q8VC85 Gm24653-201ENSMUST00000178541 79 ntBASIC2.52□□□□□ -2.01
Lsm1Q8VC85 Gm25934-201ENSMUST00000178642 79 ntBASIC2.52□□□□□ -2.01
Lsm1Q8VC85 Gm27161-201ENSMUST00000183960 562 ntBASIC2.52□□□□□ -2.01
Lsm1Q8VC85 Gm27470-201ENSMUST00000184070 210 ntBASIC2.52□□□□□ -2.01
Lsm1Q8VC85 Gm29452-201ENSMUST00000187996 313 ntBASIC2.52□□□□□ -2.01
Lsm1Q8VC85 Gm28860-201ENSMUST00000188103 313 ntBASIC2.52□□□□□ -2.01
Lsm1Q8VC85 Ms4a2-205ENSMUST00000189641 647 ntTSL 3 BASIC2.52□□□□□ -2.01
Lsm1Q8VC85 Gm38311-201ENSMUST00000192945 165 ntBASIC2.52□□□□□ -2.01
Lsm1Q8VC85 Gm19066-201ENSMUST00000193232 1078 ntBASIC2.52□□□□□ -2.01
Lsm1Q8VC85 Gm37807-201ENSMUST00000194310 190 ntBASIC2.52□□□□□ -2.01
Lsm1Q8VC85 Gm18340-201ENSMUST00000196342 609 ntBASIC2.52□□□□□ -2.01
Lsm1Q8VC85 Olfr783-ps1-201ENSMUST00000205105 441 ntBASIC2.52□□□□□ -2.01
Lsm1Q8VC85 Gm45016-201ENSMUST00000208375 396 ntTSL 3 BASIC2.52□□□□□ -2.01
Lsm1Q8VC85 Gm45400-201ENSMUST00000211603 653 ntBASIC2.52□□□□□ -2.01
Lsm1Q8VC85 AC151843.1-201ENSMUST00000215960 691 ntBASIC2.52□□□□□ -2.01
Lsm1Q8VC85 Gm18228-201ENSMUST00000217297 1091 ntBASIC2.52□□□□□ -2.01
Lsm1Q8VC85 AC147639.1-201ENSMUST00000224216 661 ntBASIC2.52□□□□□ -2.01
Lsm1Q8VC85 AC117588.2-201ENSMUST00000228340 311 ntBASIC2.52□□□□□ -2.01
Lsm1Q8VC85 Olfr394-201ENSMUST00000071478 933 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Lsm1Q8VC85 Gm23615-201ENSMUST00000082602 65 ntBASIC2.52□□□□□ -2.01
Lsm1Q8VC85 Gm18751-201ENSMUST00000185777 2013 ntBASIC2.52□□□□□ -2.01
Lsm1Q8VC85 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Lsm1Q8VC85 Olfr1174-ps-201ENSMUST00000213348 1738 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Lsm1Q8VC85 4930595M18Rik-201ENSMUST00000080083 2644 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Lsm1Q8VC85 Gm24403-201ENSMUST00000104616 130 ntBASIC2.51□□□□□ -2.01
Lsm1Q8VC85 Gm3676-201ENSMUST00000111869 899 ntAPPRIS P1 TSL 3 BASIC2.51□□□□□ -2.01
Lsm1Q8VC85 Gm14020-201ENSMUST00000118165 662 ntBASIC2.51□□□□□ -2.01
Lsm1Q8VC85 Gm14843-201ENSMUST00000119596 212 ntBASIC2.51□□□□□ -2.01
Lsm1Q8VC85 Olfr381-202ENSMUST00000119863 1065 ntAPPRIS P1 TSL 3 BASIC2.51□□□□□ -2.01
Lsm1Q8VC85 1700046C09Rik-201ENSMUST00000139973 543 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
Lsm1Q8VC85 Gm23865-201ENSMUST00000157723 97 ntBASIC2.51□□□□□ -2.01
Lsm1Q8VC85 Gm24436-201ENSMUST00000157889 302 ntBASIC2.51□□□□□ -2.01
Lsm1Q8VC85 Gm17187-201ENSMUST00000164622 410 ntBASIC2.51□□□□□ -2.01
Lsm1Q8VC85 Gm5916-201ENSMUST00000168452 1142 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Lsm1Q8VC85 Gm3573-201ENSMUST00000168673 898 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Lsm1Q8VC85 Gm8816-201ENSMUST00000182280 1163 ntBASIC2.51□□□□□ -2.01
Lsm1Q8VC85 Mir6402-201ENSMUST00000183406 80 ntBASIC2.51□□□□□ -2.01
Lsm1Q8VC85 Gm19498-201ENSMUST00000191128 331 ntBASIC2.51□□□□□ -2.01
Lsm1Q8VC85 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC2.51□□□□□ -2.01
Lsm1Q8VC85 Gm37104-201ENSMUST00000193278 196 ntBASIC2.51□□□□□ -2.01
Lsm1Q8VC85 Gm37576-201ENSMUST00000194228 372 ntBASIC2.51□□□□□ -2.01
Lsm1Q8VC85 Gm43541-201ENSMUST00000197208 581 ntBASIC2.51□□□□□ -2.01
Lsm1Q8VC85 Gm19202-201ENSMUST00000198096 808 ntBASIC2.51□□□□□ -2.01
Lsm1Q8VC85 Gm6615-201ENSMUST00000199426 631 ntBASIC2.51□□□□□ -2.01
Lsm1Q8VC85 Gm6590-201ENSMUST00000203343 687 ntBASIC2.51□□□□□ -2.01
Lsm1Q8VC85 Gm44478-201ENSMUST00000204875 114 ntBASIC2.51□□□□□ -2.01
Lsm1Q8VC85 Olfr511-ps1-201ENSMUST00000207188 217 ntBASIC2.51□□□□□ -2.01
Lsm1Q8VC85 Olfr1488-ps1-201ENSMUST00000207436 136 ntBASIC2.51□□□□□ -2.01
Lsm1Q8VC85 Gm35262-201ENSMUST00000215133 267 ntBASIC2.51□□□□□ -2.01
Lsm1Q8VC85 Olfr1161-201ENSMUST00000054845 1012 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Lsm1Q8VC85 Skint2-201ENSMUST00000058791 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
Lsm1Q8VC85 Scgb1b2-201ENSMUST00000080635 424 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Lsm1Q8VC85 AC117199.1-201ENSMUST00000219940 3132 ntBASIC2.51□□□□□ -2.01
Lsm1Q8VC85 AC153967.1-201ENSMUST00000219333 3190 ntBASIC2.5□□□□□ -2.01
Lsm1Q8VC85 Olfr1454-202ENSMUST00000213806 3906 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Lsm1Q8VC85 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC2.5□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms