Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 AC125532.1-201ENSMUST00000216210 2334 ntBASIC4.37□□□□□ -1.71
Vps53Q8CCB4 Gm25765-201ENSMUST00000104100 132 ntBASIC4.37□□□□□ -1.71
Vps53Q8CCB4 Gm9078-201ENSMUST00000119126 617 ntBASIC4.37□□□□□ -1.71
Vps53Q8CCB4 Gm5287-201ENSMUST00000120666 598 ntBASIC4.37□□□□□ -1.71
Vps53Q8CCB4 Gm22563-201ENSMUST00000157333 269 ntBASIC4.37□□□□□ -1.71
Vps53Q8CCB4 Gm24930-201ENSMUST00000158315 83 ntBASIC4.37□□□□□ -1.71
Vps53Q8CCB4 Gm26335-201ENSMUST00000178449 107 ntBASIC4.37□□□□□ -1.71
Vps53Q8CCB4 Gm22851-201ENSMUST00000178741 94 ntBASIC4.37□□□□□ -1.71
Vps53Q8CCB4 Gm25074-201ENSMUST00000178782 94 ntBASIC4.37□□□□□ -1.71
Vps53Q8CCB4 1700010L04Rik-202ENSMUST00000178848 786 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Vps53Q8CCB4 Gm7173-203ENSMUST00000179788 1254 ntTSL 5 BASIC4.37□□□□□ -1.71
Vps53Q8CCB4 Gm26556-201ENSMUST00000180645 320 ntBASIC4.37□□□□□ -1.71
Vps53Q8CCB4 Gm26936-201ENSMUST00000182424 382 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Vps53Q8CCB4 Gm27161-201ENSMUST00000183960 562 ntBASIC4.37□□□□□ -1.71
Vps53Q8CCB4 Gm28283-201ENSMUST00000185509 178 ntBASIC4.37□□□□□ -1.71
Vps53Q8CCB4 Rpl23a-ps10-201ENSMUST00000185511 462 ntBASIC4.37□□□□□ -1.71
Vps53Q8CCB4 Gm29452-201ENSMUST00000187996 313 ntBASIC4.37□□□□□ -1.71
Vps53Q8CCB4 Gm28860-201ENSMUST00000188103 313 ntBASIC4.37□□□□□ -1.71
Vps53Q8CCB4 2610044O15Rik8-206ENSMUST00000191043 504 ntTSL 2 BASIC4.37□□□□□ -1.71
Vps53Q8CCB4 Gm37399-201ENSMUST00000195224 416 ntBASIC4.37□□□□□ -1.71
Vps53Q8CCB4 Igkv14-118-2-201ENSMUST00000198287 339 ntBASIC4.37□□□□□ -1.71
Vps53Q8CCB4 Igkv14-126-1-201ENSMUST00000199899 346 ntBASIC4.37□□□□□ -1.71
Vps53Q8CCB4 Gm45173-201ENSMUST00000206819 305 ntBASIC4.37□□□□□ -1.71
Vps53Q8CCB4 Gm44864-201ENSMUST00000207292 505 ntTSL 2 BASIC4.37□□□□□ -1.71
Vps53Q8CCB4 Gm36243-201ENSMUST00000211546 610 ntTSL 3 BASIC4.37□□□□□ -1.71
Vps53Q8CCB4 AC087891.1-201ENSMUST00000217867 318 ntTSL 5 BASIC4.37□□□□□ -1.71
Vps53Q8CCB4 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC4.37□□□□□ -1.71
Vps53Q8CCB4 Gm31849-201ENSMUST00000220306 375 ntBASIC4.37□□□□□ -1.71
Vps53Q8CCB4 AC159621.1-201ENSMUST00000223249 163 ntBASIC4.37□□□□□ -1.71
Vps53Q8CCB4 Gm9845-201ENSMUST00000056409 598 ntBASIC4.37□□□□□ -1.71
Vps53Q8CCB4 Olfr914-201ENSMUST00000057755 951 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Vps53Q8CCB4 Gm24147-201ENSMUST00000082763 144 ntBASIC4.37□□□□□ -1.71
Vps53Q8CCB4 Gm26733-201ENSMUST00000180846 2046 ntTSL 5 BASIC4.37□□□□□ -1.71
Vps53Q8CCB4 Gm44689-201ENSMUST00000208786 1372 ntTSL 5 BASIC4.37□□□□□ -1.71
Vps53Q8CCB4 Gm37674-201ENSMUST00000194177 1834 ntBASIC4.37□□□□□ -1.71
Vps53Q8CCB4 Tfpi-202ENSMUST00000090732 3576 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Vps53Q8CCB4 Lyst-201ENSMUST00000110559 13181 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Vps53Q8CCB4 Vmn1r185-213ENSMUST00000228676 5199 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Vps53Q8CCB4 Mir450-2-201ENSMUST00000102444 69 ntBASIC4.36□□□□□ -1.71
Vps53Q8CCB4 Trdv5-201ENSMUST00000103685 438 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Vps53Q8CCB4 Gm25272-201ENSMUST00000104293 128 ntBASIC4.36□□□□□ -1.71
Vps53Q8CCB4 Gm14926-201ENSMUST00000120650 508 ntBASIC4.36□□□□□ -1.71
Vps53Q8CCB4 Smt3h2-ps4-201ENSMUST00000121569 288 ntBASIC4.36□□□□□ -1.71
Vps53Q8CCB4 Gm14129-201ENSMUST00000122436 291 ntBASIC4.36□□□□□ -1.71
Vps53Q8CCB4 Gm15899-201ENSMUST00000128586 238 ntBASIC4.36□□□□□ -1.71
Vps53Q8CCB4 Gm11640-201ENSMUST00000155987 272 ntTSL 3 BASIC4.36□□□□□ -1.71
Vps53Q8CCB4 Gm22320-201ENSMUST00000157149 312 ntBASIC4.36□□□□□ -1.71
Vps53Q8CCB4 Gm22219-201ENSMUST00000157562 319 ntBASIC4.36□□□□□ -1.71
Vps53Q8CCB4 Clec5a-204ENSMUST00000177178 665 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
Vps53Q8CCB4 Gm6625-201ENSMUST00000177870 272 ntBASIC4.36□□□□□ -1.71
Vps53Q8CCB4 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
Vps53Q8CCB4 2310001H17Rik-201ENSMUST00000180379 521 ntTSL 2 BASIC4.36□□□□□ -1.71
Vps53Q8CCB4 Mir7676-1-201ENSMUST00000183491 62 ntBASIC4.36□□□□□ -1.71
Vps53Q8CCB4 Mir7676-2-201ENSMUST00000183523 62 ntBASIC4.36□□□□□ -1.71
Vps53Q8CCB4 1810022K09Rik-203ENSMUST00000185423 278 ntTSL 3 BASIC4.36□□□□□ -1.71
Vps53Q8CCB4 Gm37104-201ENSMUST00000193278 196 ntBASIC4.36□□□□□ -1.71
Vps53Q8CCB4 Gm31925-201ENSMUST00000193561 600 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Vps53Q8CCB4 Gm5001-201ENSMUST00000204361 331 ntBASIC4.36□□□□□ -1.71
Vps53Q8CCB4 4930587E11Rik-202ENSMUST00000204857 807 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Vps53Q8CCB4 Gm45232-201ENSMUST00000207811 162 ntBASIC4.36□□□□□ -1.71
Vps53Q8CCB4 Gm6112-201ENSMUST00000208037 629 ntBASIC4.36□□□□□ -1.71
Vps53Q8CCB4 AC152415.1-201ENSMUST00000213320 440 ntBASIC4.36□□□□□ -1.71
Vps53Q8CCB4 Olfr746-202ENSMUST00000218546 987 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Vps53Q8CCB4 AC157570.3-201ENSMUST00000219281 205 ntBASIC4.36□□□□□ -1.71
Vps53Q8CCB4 AC154368.1-201ENSMUST00000223465 205 ntTSL 5 BASIC4.36□□□□□ -1.71
Vps53Q8CCB4 CT025689.4-201ENSMUST00000225926 601 ntBASIC4.36□□□□□ -1.71
Vps53Q8CCB4 AC164883.9-201ENSMUST00000228042 399 ntBASIC4.36□□□□□ -1.71
Vps53Q8CCB4 Olfr885-201ENSMUST00000081985 930 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Vps53Q8CCB4 Mir19a-201ENSMUST00000083482 82 ntBASIC4.36□□□□□ -1.71
Vps53Q8CCB4 Gm9747-201ENSMUST00000023262 2822 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Vps53Q8CCB4 Olfr1366-202ENSMUST00000175637 3045 ntAPPRIS ALT2 TSL 3 BASIC4.36□□□□□ -1.71
Vps53Q8CCB4 Trdn-208ENSMUST00000219982 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
Vps53Q8CCB4 Vmn2r-ps36-201ENSMUST00000172589 2562 ntBASIC4.36□□□□□ -1.71
Vps53Q8CCB4 AC126673.3-201ENSMUST00000223414 3829 ntBASIC4.36□□□□□ -1.71
Vps53Q8CCB4 Olfr1093-203ENSMUST00000219561 2124 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Vps53Q8CCB4 A830019L24Rik-201ENSMUST00000197226 1652 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Vps53Q8CCB4 Nae1-201ENSMUST00000034349 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Vps53Q8CCB4 Gm37176-201ENSMUST00000193300 4051 ntBASIC4.35□□□□□ -1.71
Vps53Q8CCB4 Ddx60-201ENSMUST00000070631 6535 ntAPPRIS P2 TSL 5 BASIC4.35□□□□□ -1.71
Vps53Q8CCB4 Hyal6-201ENSMUST00000031690 3452 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Vps53Q8CCB4 Olfr1293-ps-203ENSMUST00000217845 3628 ntAPPRIS P5 TSL 5 BASIC4.35□□□□□ -1.71
Vps53Q8CCB4 Gm13806-201ENSMUST00000117822 325 ntBASIC4.35□□□□□ -1.71
Vps53Q8CCB4 Klrc2-203ENSMUST00000118401 707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
Vps53Q8CCB4 Gm25105-201ENSMUST00000122477 130 ntBASIC4.35□□□□□ -1.71
Vps53Q8CCB4 Gm6058-201ENSMUST00000154261 399 ntBASIC4.35□□□□□ -1.71
Vps53Q8CCB4 Gm24976-201ENSMUST00000158972 135 ntBASIC4.35□□□□□ -1.71
Vps53Q8CCB4 Vmn2r-ps35-201ENSMUST00000169206 831 ntBASIC4.35□□□□□ -1.71
Vps53Q8CCB4 Mir3066-201ENSMUST00000175296 83 ntBASIC4.35□□□□□ -1.71
Vps53Q8CCB4 Vmn1r-ps15-201ENSMUST00000177365 910 ntBASIC4.35□□□□□ -1.71
Vps53Q8CCB4 Gm23860-201ENSMUST00000179446 132 ntBASIC4.35□□□□□ -1.71
Vps53Q8CCB4 Mpc1-ps-201ENSMUST00000181662 330 ntBASIC4.35□□□□□ -1.71
Vps53Q8CCB4 Mir6382-201ENSMUST00000184055 110 ntBASIC4.35□□□□□ -1.71
Vps53Q8CCB4 Gm27952-201ENSMUST00000184748 105 ntBASIC4.35□□□□□ -1.71
Vps53Q8CCB4 Gm37343-201ENSMUST00000192542 111 ntBASIC4.35□□□□□ -1.71
Vps53Q8CCB4 Cyp3a63-ps-201ENSMUST00000196626 1170 ntBASIC4.35□□□□□ -1.71
Vps53Q8CCB4 Gm3010-201ENSMUST00000198805 448 ntBASIC4.35□□□□□ -1.71
Vps53Q8CCB4 Gm18540-201ENSMUST00000204025 526 ntBASIC4.35□□□□□ -1.71
Vps53Q8CCB4 Gm45020-201ENSMUST00000205356 381 ntTSL 3 BASIC4.35□□□□□ -1.71
Vps53Q8CCB4 Gm37797-201ENSMUST00000212114 815 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Vps53Q8CCB4 AC162387.1-201ENSMUST00000213369 213 ntBASIC4.35□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms