Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Trim47Q8C0E3 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Trim47Q8C0E3 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC5.41□□□□□ -1.54
Trim47Q8C0E3 Gm14657-201ENSMUST00000117461 302 ntBASIC5.41□□□□□ -1.54
Trim47Q8C0E3 Hmgb1-ps1-201ENSMUST00000119350 634 ntBASIC5.41□□□□□ -1.54
Trim47Q8C0E3 Gm13677-201ENSMUST00000120739 595 ntBASIC5.41□□□□□ -1.54
Trim47Q8C0E3 Gm7840-201ENSMUST00000122086 533 ntBASIC5.41□□□□□ -1.54
Trim47Q8C0E3 Gm24594-201ENSMUST00000122502 99 ntBASIC5.41□□□□□ -1.54
Trim47Q8C0E3 Gm24944-201ENSMUST00000158330 128 ntBASIC5.41□□□□□ -1.54
Trim47Q8C0E3 Gm3191-201ENSMUST00000167139 346 ntBASIC5.41□□□□□ -1.54
Trim47Q8C0E3 Mir466b-1-201ENSMUST00000177988 82 ntBASIC5.41□□□□□ -1.54
Trim47Q8C0E3 Gm25450-201ENSMUST00000179144 107 ntBASIC5.41□□□□□ -1.54
Trim47Q8C0E3 Gm28978-201ENSMUST00000191120 615 ntBASIC5.41□□□□□ -1.54
Trim47Q8C0E3 Gm36934-201ENSMUST00000192007 306 ntBASIC5.41□□□□□ -1.54
Trim47Q8C0E3 Gm36946-201ENSMUST00000192706 435 ntBASIC5.41□□□□□ -1.54
Trim47Q8C0E3 AC174780.1-201ENSMUST00000199415 1107 ntBASIC5.41□□□□□ -1.54
Trim47Q8C0E3 AC158803.3-201ENSMUST00000220024 211 ntBASIC5.41□□□□□ -1.54
Trim47Q8C0E3 AC153864.2-201ENSMUST00000220424 292 ntBASIC5.41□□□□□ -1.54
Trim47Q8C0E3 Rpl21-ps4-201ENSMUST00000080237 438 ntBASIC5.41□□□□□ -1.54
Trim47Q8C0E3 Gm23239-201ENSMUST00000083006 181 ntBASIC5.41□□□□□ -1.54
Trim47Q8C0E3 Cyp3a57-201ENSMUST00000079268 1986 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Trim47Q8C0E3 Pof1b-201ENSMUST00000039887 3886 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Trim47Q8C0E3 Gm44250-201ENSMUST00000203092 4229 ntBASIC5.41□□□□□ -1.54
Trim47Q8C0E3 Clvs1-202ENSMUST00000108348 3526 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Trim47Q8C0E3 Gm45066-201ENSMUST00000207528 2551 ntBASIC5.41□□□□□ -1.54
Trim47Q8C0E3 Olfr165-202ENSMUST00000206110 1862 ntAPPRIS ALT1 TSL 3 BASIC5.41□□□□□ -1.54
Trim47Q8C0E3 Gm4166-201ENSMUST00000220893 2996 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Trim47Q8C0E3 Acsm3-202ENSMUST00000106526 2704 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Trim47Q8C0E3 Fbxw24-201ENSMUST00000073962 1488 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Trim47Q8C0E3 Vmn2r112-201ENSMUST00000097381 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Trim47Q8C0E3 Olfr733-204ENSMUST00000216195 3669 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Trim47Q8C0E3 Lpar4-201ENSMUST00000060576 4238 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Trim47Q8C0E3 Slamf7-203ENSMUST00000192195 3975 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
Trim47Q8C0E3 Rnf2-204ENSMUST00000187048 3201 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Trim47Q8C0E3 Clec1b-203ENSMUST00000112081 614 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
Trim47Q8C0E3 Gm15029-201ENSMUST00000119742 199 ntBASIC5.4□□□□□ -1.54
Trim47Q8C0E3 Gm14714-201ENSMUST00000119743 439 ntBASIC5.4□□□□□ -1.54
Trim47Q8C0E3 Gm14656-201ENSMUST00000120342 502 ntBASIC5.4□□□□□ -1.54
Trim47Q8C0E3 Gm11819-201ENSMUST00000122192 372 ntBASIC5.4□□□□□ -1.54
Trim47Q8C0E3 Gm22989-201ENSMUST00000158313 86 ntBASIC5.4□□□□□ -1.54
Trim47Q8C0E3 Gm16303-201ENSMUST00000161498 390 ntBASIC5.4□□□□□ -1.54
Trim47Q8C0E3 Gm37692-201ENSMUST00000192633 232 ntBASIC5.4□□□□□ -1.54
Trim47Q8C0E3 Gm37763-201ENSMUST00000193445 120 ntBASIC5.4□□□□□ -1.54
Trim47Q8C0E3 Gm42578-201ENSMUST00000199960 194 ntBASIC5.4□□□□□ -1.54
Trim47Q8C0E3 AC158395.1-201ENSMUST00000227206 452 ntBASIC5.4□□□□□ -1.54
Trim47Q8C0E3 Nlrp1b-203ENSMUST00000108515 4131 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
Trim47Q8C0E3 Olfr1290-204ENSMUST00000217611 2729 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.55
Trim47Q8C0E3 Olfr1489-202ENSMUST00000217182 11140 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
Trim47Q8C0E3 C130073E24Rik-202ENSMUST00000211313 14112 ntTSL 5 BASIC5.4□□□□□ -1.55
Trim47Q8C0E3 Lcorl-204ENSMUST00000087164 4979 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
Trim47Q8C0E3 Pirb-201ENSMUST00000078451 3824 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Trim47Q8C0E3 Olfr726-203ENSMUST00000213345 1728 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
Trim47Q8C0E3 Olfr984-202ENSMUST00000213858 5186 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
Trim47Q8C0E3 Olfr1217-203ENSMUST00000214022 3947 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.55
Trim47Q8C0E3 Obscn-202ENSMUST00000047441 24175 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
Trim47Q8C0E3 AC112274.1-201ENSMUST00000218957 4274 ntBASIC5.4□□□□□ -1.55
Trim47Q8C0E3 Gm29506-201ENSMUST00000191045 2078 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Trim47Q8C0E3 Gm43834-201ENSMUST00000197097 4830 ntBASIC5.39□□□□□ -1.55
Trim47Q8C0E3 Olfr1152-202ENSMUST00000213308 6201 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Trim47Q8C0E3 Dram2-201ENSMUST00000029507 1891 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Trim47Q8C0E3 Gm42524-201ENSMUST00000202881 2214 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Trim47Q8C0E3 Vmn1r6-203ENSMUST00000227131 8330 ntAPPRIS P2 BASIC5.39□□□□□ -1.55
Trim47Q8C0E3 Gm37205-201ENSMUST00000194820 2736 ntBASIC5.39□□□□□ -1.55
Trim47Q8C0E3 Gm22784-201ENSMUST00000104088 132 ntBASIC5.39□□□□□ -1.55
Trim47Q8C0E3 Gm7312-201ENSMUST00000118798 469 ntBASIC5.39□□□□□ -1.55
Trim47Q8C0E3 Gm15643-201ENSMUST00000126556 383 ntTSL 3 BASIC5.39□□□□□ -1.55
Trim47Q8C0E3 Gm23318-201ENSMUST00000158000 108 ntBASIC5.39□□□□□ -1.55
Trim47Q8C0E3 Gm22113-201ENSMUST00000158343 104 ntBASIC5.39□□□□□ -1.55
Trim47Q8C0E3 Smdt1-202ENSMUST00000159054 294 ntTSL 5 BASIC5.39□□□□□ -1.55
Trim47Q8C0E3 Gm23571-201ENSMUST00000180073 127 ntBASIC5.39□□□□□ -1.55
Trim47Q8C0E3 Gm28181-201ENSMUST00000191460 687 ntTSL 3 BASIC5.39□□□□□ -1.55
Trim47Q8C0E3 Gm38180-201ENSMUST00000192381 395 ntTSL 5 BASIC5.39□□□□□ -1.55
Trim47Q8C0E3 Gm32536-201ENSMUST00000205209 445 ntBASIC5.39□□□□□ -1.55
Trim47Q8C0E3 AC160635.2-201ENSMUST00000216368 734 ntTSL 5 BASIC5.39□□□□□ -1.55
Trim47Q8C0E3 AC164297.3-201ENSMUST00000224238 94 ntBASIC5.39□□□□□ -1.55
Trim47Q8C0E3 Gm23454-201ENSMUST00000083332 133 ntBASIC5.39□□□□□ -1.55
Trim47Q8C0E3 Mmp1a-202ENSMUST00000217651 2011 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Trim47Q8C0E3 Gm45557-201ENSMUST00000210004 1651 ntBASIC5.39□□□□□ -1.55
Trim47Q8C0E3 Olfr1176-202ENSMUST00000213778 2823 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Trim47Q8C0E3 Cnot7-203ENSMUST00000132032 2542 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Trim47Q8C0E3 Vmn2r4-201ENSMUST00000170280 2484 ntAPPRIS P2 TSL 5 BASIC5.38□□□□□ -1.55
Trim47Q8C0E3 Slc15a2-201ENSMUST00000023616 3993 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Trim47Q8C0E3 Epha7-203ENSMUST00000108191 6615 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Trim47Q8C0E3 Gm10635-201ENSMUST00000217201 3721 ntTSL 2 BASIC5.38□□□□□ -1.55
Trim47Q8C0E3 Olfr1129-202ENSMUST00000213315 2255 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
Trim47Q8C0E3 Gm24263-201ENSMUST00000104059 107 ntBASIC5.38□□□□□ -1.55
Trim47Q8C0E3 Gm24469-201ENSMUST00000104487 131 ntBASIC5.38□□□□□ -1.55
Trim47Q8C0E3 Rps19-ps7-201ENSMUST00000116122 438 ntBASIC5.38□□□□□ -1.55
Trim47Q8C0E3 Gm12683-201ENSMUST00000117528 415 ntBASIC5.38□□□□□ -1.55
Trim47Q8C0E3 Gm12704-201ENSMUST00000119789 464 ntBASIC5.38□□□□□ -1.55
Trim47Q8C0E3 Chrna1os-201ENSMUST00000125413 680 ntTSL 3 BASIC5.38□□□□□ -1.55
Trim47Q8C0E3 Gm25883-201ENSMUST00000157781 271 ntBASIC5.38□□□□□ -1.55
Trim47Q8C0E3 Gm27510-201ENSMUST00000158214 64 ntBASIC5.38□□□□□ -1.55
Trim47Q8C0E3 Gm26828-201ENSMUST00000180640 172 ntBASIC5.38□□□□□ -1.55
Trim47Q8C0E3 Gm43583-201ENSMUST00000199235 303 ntBASIC5.38□□□□□ -1.55
Trim47Q8C0E3 Gm43284-201ENSMUST00000200103 253 ntBASIC5.38□□□□□ -1.55
Trim47Q8C0E3 Gm32308-201ENSMUST00000203053 280 ntBASIC5.38□□□□□ -1.55
Trim47Q8C0E3 Gm32222-201ENSMUST00000203296 298 ntBASIC5.38□□□□□ -1.55
Trim47Q8C0E3 Gm44881-201ENSMUST00000205425 367 ntBASIC5.38□□□□□ -1.55
Trim47Q8C0E3 Gm6796-201ENSMUST00000211919 243 ntBASIC5.38□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 91 ms